RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 PNMA1Q8ND90 353 aa23.42■■□□□ 1.34
SF1-213ENST00000472725 JAKMIP1Q96N16 626 aaKnown RBP23.42■■□□□ 1.34
SF1-213ENST00000472725 TANGO6Q9C0B7 1094 aa23.42■■□□□ 1.34
SF1-213ENST00000472725 UPF2Q9HAU5 1272 aaKnown RBP23.42■■□□□ 1.34
SF1-213ENST00000472725 PARP14Q460N5 1801 aa23.41■■□□□ 1.34
SF1-213ENST00000472725 RAD21O60216 631 aa23.41■■□□□ 1.34
SF1-213ENST00000472725 SNHG28P0DPA3 235 aa23.41■■□□□ 1.34
SF1-213ENST00000472725 HERVK_113P62684 666 aa23.41■■□□□ 1.34
SF1-213ENST00000472725 FEM1BQ9UK73 627 aa23.41■■□□□ 1.34
SF1-213ENST00000472725 RLFQ13129 1914 aa23.4■■□□□ 1.34
SF1-213ENST00000472725 SH2B2O14492 632 aaPredicted RBP23.4■■□□□ 1.34
SF1-213ENST00000472725 TBC1D8O95759 1140 aa23.4■■□□□ 1.34
SF1-213ENST00000472725 CYP2C8P10632 490 aa23.4■■□□□ 1.34
SF1-213ENST00000472725 FAM83BQ5T0W9 1011 aa23.4■■□□□ 1.34
SF1-213ENST00000472725 GPATCH4Q5T3I0 446 aaKnown RBP23.4■■□□□ 1.34
SF1-213ENST00000472725 C17orf99Q6UX52 265 aa23.4■■□□□ 1.34
SF1-213ENST00000472725 CHST3Q7LGC8 479 aa23.4■■□□□ 1.34
SF1-213ENST00000472725 FAM160B2Q86V87 743 aa23.4■■□□□ 1.34
SF1-213ENST00000472725 MB21D1Q8N884 522 aa23.4■■□□□ 1.34
SF1-213ENST00000472725 CHURC1Q8WUH1 139 aa23.4■■□□□ 1.34
SF1-213ENST00000472725 P2RX7Q99572 595 aaKnown RBP23.4■■□□□ 1.34
SF1-213ENST00000472725 LY9Q9HBG7 655 aa23.4■■□□□ 1.34
SF1-213ENST00000472725 ZSWIM6Q9HCJ5 1215 aa23.4■■□□□ 1.34
SF1-213ENST00000472725 GPR25O00155 361 aa23.39■■□□□ 1.33
SF1-213ENST00000472725 FLOT1O75955 427 aa23.39■■□□□ 1.33
SF1-213ENST00000472725 FDX1P10109 184 aa23.39■■□□□ 1.33
SF1-213ENST00000472725 PDHBP11177 359 aa23.39■■□□□ 1.33
SF1-213ENST00000472725 DSG3P32926 999 aa23.39■■□□□ 1.33
SF1-213ENST00000472725 SGMS1Q86VZ5 419 aa23.39■■□□□ 1.33
SF1-213ENST00000472725 PRPF38AQ8NAV1 312 aaKnown RBP23.39■■□□□ 1.33
SF1-213ENST00000472725 MAP3K14Q99558 947 aa23.39■■□□□ 1.33
SF1-213ENST00000472725 FOXN1O15353 648 aa23.38■■□□□ 1.33
SF1-213ENST00000472725 BCRP11274 1271 aa23.38■■□□□ 1.33
SF1-213ENST00000472725 CASTP20810 708 aaKnown RBP23.38■■□□□ 1.33
SF1-213ENST00000472725 RPS6KB1P23443 525 aa23.38■■□□□ 1.33
SF1-213ENST00000472725 STAT2P52630 851 aa23.38■■□□□ 1.33
SF1-213ENST00000472725 FAM110CQ1W6H9 321 aa23.38■■□□□ 1.33
SF1-213ENST00000472725 RUFY3Q7L099 469 aa23.38■■□□□ 1.33
SF1-213ENST00000472725 CATIPQ7Z7H3 387 aa23.38■■□□□ 1.33
SF1-213ENST00000472725 SLF1Q9BQI6 1058 aa23.38■■□□□ 1.33
SF1-213ENST00000472725 MORF4L1Q9UBU8 362 aa23.38■■□□□ 1.33
SF1-213ENST00000472725 PPP1R9AQ9ULJ8 1098 aa23.38■■□□□ 1.33
SF1-213ENST00000472725 ADAMTS5Q9UNA0 930 aa23.38■■□□□ 1.33
SF1-213ENST00000472725 RABGAP1Q9Y3P9 1069 aa23.38■■□□□ 1.33
SF1-213ENST00000472725 CYP46A1Q9Y6A2 500 aa23.38■■□□□ 1.33
SF1-213ENST00000472725 SPDYE16A6NNV3 312 aaPredicted RBP23.37■■□□□ 1.33
SF1-213ENST00000472725 HSPA8P11142 646 aaKnown RBP23.37■■□□□ 1.33
SF1-213ENST00000472725 ZNF543Q08ER8 600 aa23.37■■□□□ 1.33
SF1-213ENST00000472725 ASPRV1Q53RT3 343 aa23.37■■□□□ 1.33
SF1-213ENST00000472725 BTNL9Q6UXG8 535 aa23.37■■□□□ 1.33
SF1-213ENST00000472725 IL27Q8NEV9 243 aa23.37■■□□□ 1.33
SF1-213ENST00000472725 BACH2Q9BYV9 841 aa23.37■■□□□ 1.33
SF1-213ENST00000472725 CCDC69A6NI79 296 aa23.36■■□□□ 1.33
SF1-213ENST00000472725 DDAH1O94760 285 aa23.36■■□□□ 1.33
SF1-213ENST00000472725 CALM1P0DP23 149 aa23.36■■□□□ 1.33
SF1-213ENST00000472725 CALM2P0DP24 149 aa23.36■■□□□ 1.33
SF1-213ENST00000472725 CALM3P0DP25 149 aa23.36■■□□□ 1.33
SF1-213ENST00000472725 SP3Q02447 781 aa23.36■■□□□ 1.33
SF1-213ENST00000472725 NUP88Q99567 741 aaPredicted RBP23.36■■□□□ 1.33
SF1-213ENST00000472725 AGXT2Q9BYV1 514 aa23.36■■□□□ 1.33
SF1-213ENST00000472725 R3HDMLQ9H3Y0 253 aa23.36■■□□□ 1.33
SF1-213ENST00000472725 A0A0G2JMZ2 1700 aa23.36■■□□□ 1.33
SF1-213ENST00000472725 TMEM232C9JQI7 657 aa23.35■■□□□ 1.33
SF1-213ENST00000472725 FKTNO75072 461 aa23.35■■□□□ 1.33
SF1-213ENST00000472725 RBM25P49756 843 aaKnown RBP23.35■■□□□ 1.33
SF1-213ENST00000472725 RCAN1P53805 252 aa23.35■■□□□ 1.33
SF1-213ENST00000472725 TROAPQ12815 778 aa23.35■■□□□ 1.33
SF1-213ENST00000472725 CCDC96Q2M329 555 aa23.35■■□□□ 1.33
SF1-213ENST00000472725 NFXL1Q6ZNB6 911 aa23.35■■□□□ 1.33
SF1-213ENST00000472725 C22orf23Q9BZE7 217 aa23.35■■□□□ 1.33
SF1-213ENST00000472725 CPA4Q9UI42 421 aa23.35■■□□□ 1.33
SF1-213ENST00000472725 PARP1P09874 1014 aaKnown RBP23.34■■□□□ 1.33
SF1-213ENST00000472725 FGD1P98174 961 aa23.34■■□□□ 1.33
SF1-213ENST00000472725 COL9A3Q14050 684 aaPredicted RBP23.34■■□□□ 1.33
SF1-213ENST00000472725 ARHGEF6Q15052 776 aa23.34■■□□□ 1.33
SF1-213ENST00000472725 SYNE3Q6ZMZ3 975 aa23.34■■□□□ 1.33
SF1-213ENST00000472725 ZNF654Q8IZM8 581 aa23.34■■□□□ 1.33
SF1-213ENST00000472725 GPRC5AQ8NFJ5 357 aa23.34■■□□□ 1.33
SF1-213ENST00000472725 RBPJLQ9UBG7 517 aa23.34■■□□□ 1.33
SF1-213ENST00000472725 SLC12A7Q9Y666 1083 aa23.34■■□□□ 1.33
SF1-213ENST00000472725 KCTD1Q719H9 257 aa23.33■■□□□ 1.33
SF1-213ENST00000472725 ANKRD13CQ8N6S4 541 aa23.33■■□□□ 1.33
SF1-213ENST00000472725 ERO1AQ96HE7 468 aa23.33■■□□□ 1.33
SF1-213ENST00000472725 ALDH8A1Q9H2A2 487 aaPredicted RBP23.33■■□□□ 1.33
SF1-213ENST00000472725 SENP2Q9HC62 589 aa23.33■■□□□ 1.33
SF1-213ENST00000472725 PRDM10Q9NQV6 1147 aa23.33■■□□□ 1.33
SF1-213ENST00000472725 FBXO28Q9NVF7 368 aa23.33■■□□□ 1.33
SF1-213ENST00000472725 MTMR7Q9Y216 660 aa23.33■■□□□ 1.33
SF1-213ENST00000472725 VWA5AO00534 786 aa23.32■■□□□ 1.32
SF1-213ENST00000472725 KIF5BP33176 963 aa23.32■■□□□ 1.32
SF1-213ENST00000472725 OAZ1P54368 228 aa23.32■■□□□ 1.32
SF1-213ENST00000472725 CCNA1P78396 465 aa23.32■■□□□ 1.32
SF1-213ENST00000472725 IKQ13123 557 aaPredicted RBP23.32■■□□□ 1.32
SF1-213ENST00000472725 KIF22Q14807 665 aa23.32■■□□□ 1.32
SF1-213ENST00000472725 GRM4Q14833 912 aa23.32■■□□□ 1.32
SF1-213ENST00000472725 Q6ZUG5 572 aa23.32■■□□□ 1.32
SF1-213ENST00000472725 ZNF296Q8WUU4 475 aaPredicted RBP23.32■■□□□ 1.32
SF1-213ENST00000472725 ATG4CQ96DT6 458 aa23.32■■□□□ 1.32
SF1-213ENST00000472725 LRRC2Q9BYS8 371 aa23.32■■□□□ 1.32
SF1-213ENST00000472725 TSKSQ9UJT2 592 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms