RNA–Protein interactions for RNA: ENST00000472659.1

PKD1-209, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 661 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-209ENST00000472659 CLIP2Q9UDT6 1046 aa22.1■■□□□ 1.13
PKD1-209ENST00000472659 LAMA4Q16363 1823 aa22.09■■□□□ 1.13
PKD1-209ENST00000472659 HIP1O00291 1037 aa22.09■■□□□ 1.13
PKD1-209ENST00000472659 ORC4O43929 436 aa22.09■■□□□ 1.13
PKD1-209ENST00000472659 TTLL1O95922 423 aa22.09■■□□□ 1.13
PKD1-209ENST00000472659 GJB1P08034 283 aa22.09■■□□□ 1.13
PKD1-209ENST00000472659 TFAP4Q01664 338 aa22.09■■□□□ 1.13
PKD1-209ENST00000472659 CCAR1Q8IX12 1150 aaKnown RBP22.09■■□□□ 1.13
PKD1-209ENST00000472659 SPATC1LQ9H0A9 340 aa22.09■■□□□ 1.13
PKD1-209ENST00000472659 RNF208Q9H0X6 261 aa22.09■■□□□ 1.13
PKD1-209ENST00000472659 DIAPH3Q9NSV4 1193 aa22.09■■□□□ 1.13
PKD1-209ENST00000472659 COL11A1P12107 1806 aaPredicted RBP22.08■■□□□ 1.13
PKD1-209ENST00000472659 CYP2B6P20813 491 aa22.08■■□□□ 1.13
PKD1-209ENST00000472659 GJA8P48165 433 aa22.08■■□□□ 1.13
PKD1-209ENST00000472659 MFAP1P55081 439 aaKnown RBP22.08■■□□□ 1.13
PKD1-209ENST00000472659 GRB14Q14449 540 aa22.08■■□□□ 1.13
PKD1-209ENST00000472659 CWC27Q6UX04 472 aaKnown RBP22.08■■□□□ 1.13
PKD1-209ENST00000472659 GMCL1P1Q8NEA9 526 aa22.08■■□□□ 1.13
PKD1-209ENST00000472659 NUP88Q99567 741 aaPredicted RBP22.08■■□□□ 1.13
PKD1-209ENST00000472659 APBA2Q99767 749 aa22.08■■□□□ 1.13
PKD1-209ENST00000472659 NBPF3Q9H094 633 aa22.08■■□□□ 1.13
PKD1-209ENST00000472659 PAK6Q9NQU5 681 aaPredicted RBP22.08■■□□□ 1.13
PKD1-209ENST00000472659 PPP1R9AQ9ULJ8 1098 aa22.08■■□□□ 1.13
PKD1-209ENST00000472659 CAPN2P17655 700 aa22.07■■□□□ 1.12
PKD1-209ENST00000472659 PTPREP23469 700 aa22.07■■□□□ 1.12
PKD1-209ENST00000472659 RGS2P41220 211 aa22.07■■□□□ 1.12
PKD1-209ENST00000472659 TRIM32Q13049 653 aa22.07■■□□□ 1.12
PKD1-209ENST00000472659 MAP2K5Q13163 448 aa22.07■■□□□ 1.12
PKD1-209ENST00000472659 LRRC47Q8N1G4 583 aaKnown RBP22.07■■□□□ 1.12
PKD1-209ENST00000472659 SHCBP1Q8NEM2 672 aa22.07■■□□□ 1.12
PKD1-209ENST00000472659 IL17RBQ9NRM6 502 aa22.07■■□□□ 1.12
PKD1-209ENST00000472659 SLC15A5A6NIM6 579 aa22.06■■□□□ 1.12
PKD1-209ENST00000472659 TSPY2A6NKD2 308 aa22.06■■□□□ 1.12
PKD1-209ENST00000472659 RAD21O60216 631 aa22.06■■□□□ 1.12
PKD1-209ENST00000472659 NOVP48745 357 aa22.06■■□□□ 1.12
PKD1-209ENST00000472659 TMEM132BQ14DG7 1078 aa22.06■■□□□ 1.12
PKD1-209ENST00000472659 MAP3K21Q5TCX8 1036 aa22.06■■□□□ 1.12
PKD1-209ENST00000472659 REPS2Q8NFH8 660 aa22.06■■□□□ 1.12
PKD1-209ENST00000472659 NKX2-3Q8TAU0 364 aa22.06■■□□□ 1.12
PKD1-209ENST00000472659 VWA5AO00534 786 aa22.05■■□□□ 1.12
PKD1-209ENST00000472659 HOXC6P09630 235 aa22.05■■□□□ 1.12
PKD1-209ENST00000472659 ERCC3P19447 782 aa22.05■■□□□ 1.12
PKD1-209ENST00000472659 WDR78Q5VTH9 848 aa22.05■■□□□ 1.12
PKD1-209ENST00000472659 TRMT44Q8IYL2 757 aaKnown RBP22.05■■□□□ 1.12
PKD1-209ENST00000472659 IL25Q9H293 177 aa22.05■■□□□ 1.12
PKD1-209ENST00000472659 CWC22Q9HCG8 908 aaKnown RBP22.05■■□□□ 1.12
PKD1-209ENST00000472659 ZNF214Q9UL59 606 aaPredicted RBP22.05■■□□□ 1.12
PKD1-209ENST00000472659 NMT2O60551 498 aa22.04■■□□□ 1.12
PKD1-209ENST00000472659 ZKSCAN1P17029 563 aaPredicted RBP22.04■■□□□ 1.12
PKD1-209ENST00000472659 HAND2P61296 217 aa22.04■■□□□ 1.12
PKD1-209ENST00000472659 CCL14Q16627 93 aa22.04■■□□□ 1.12
PKD1-209ENST00000472659 PPP4R3BQ5MIZ7 849 aa22.04■■□□□ 1.12
PKD1-209ENST00000472659 UBE2Q1Q7Z7E8 422 aa22.04■■□□□ 1.12
PKD1-209ENST00000472659 TBC1D10CQ8IV04 446 aa22.04■■□□□ 1.12
PKD1-209ENST00000472659 U2AF1L4Q8WU68 220 aaKnown RBP22.04■■□□□ 1.12
PKD1-209ENST00000472659 SLF1Q9BQI6 1058 aa22.04■■□□□ 1.12
PKD1-209ENST00000472659 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.04■■□□□ 1.12
PKD1-209ENST00000472659 IVNS1ABPQ9Y6Y0 642 aa22.04■■□□□ 1.12
PKD1-209ENST00000472659 RANBP6O60518 1105 aaKnown RBP22.03■■□□□ 1.12
PKD1-209ENST00000472659 SAMD1Q6SPF0 538 aaPredicted RBP22.03■■□□□ 1.12
PKD1-209ENST00000472659 STAG1Q8WVM7 1258 aa22.03■■□□□ 1.12
PKD1-209ENST00000472659 DSCC1Q9BVC3 393 aa22.03■■□□□ 1.12
PKD1-209ENST00000472659 MROH8Q9H579 483 aa22.03■■□□□ 1.12
PKD1-209ENST00000472659 SGPL1O95470 568 aa22.02■■□□□ 1.12
PKD1-209ENST00000472659 IGHA2P01877 340 aa22.02■■□□□ 1.12
PKD1-209ENST00000472659 PCP11498 1178 aaKnown RBP22.02■■□□□ 1.12
PKD1-209ENST00000472659 PLS1Q14651 629 aa22.02■■□□□ 1.12
PKD1-209ENST00000472659 AKNAD1Q5T1N1 836 aa22.02■■□□□ 1.12
PKD1-209ENST00000472659 GMCL1Q96IK5 515 aa22.02■■□□□ 1.12
PKD1-209ENST00000472659 DEFB118Q96PH6 123 aa22.02■■□□□ 1.12
PKD1-209ENST00000472659 CRISPLD2Q9H0B8 497 aa22.02■■□□□ 1.12
PKD1-209ENST00000472659 STX8Q9UNK0 236 aa22.02■■□□□ 1.12
PKD1-209ENST00000472659 RPTORQ8N122 1335 aa22.02■■□□□ 1.12
PKD1-209ENST00000472659 STRNO43815 780 aa22.01■■□□□ 1.11
PKD1-209ENST00000472659 PRKAR2AP13861 404 aaKnown RBP22.01■■□□□ 1.11
PKD1-209ENST00000472659 ADORA2AP29274 412 aa22.01■■□□□ 1.11
PKD1-209ENST00000472659 SLFN13Q68D06 897 aa22.01■■□□□ 1.11
PKD1-209ENST00000472659 RIOX2Q8IUF8 465 aa22.01■■□□□ 1.11
PKD1-209ENST00000472659 ABRAQ8N0Z2 381 aa22.01■■□□□ 1.11
PKD1-209ENST00000472659 PRPF38AQ8NAV1 312 aaKnown RBP22.01■■□□□ 1.11
PKD1-209ENST00000472659 HMX1Q9NP08 348 aaPredicted RBP22.01■■□□□ 1.11
PKD1-209ENST00000472659 FLRT1Q9NZU1 646 aa22.01■■□□□ 1.11
PKD1-209ENST00000472659 CEP290O15078 2479 aa22■■□□□ 1.11
PKD1-209ENST00000472659 SLC25A27O95847 323 aa22■■□□□ 1.11
PKD1-209ENST00000472659 CACNB2Q08289 660 aaPredicted RBP22■■□□□ 1.11
PKD1-209ENST00000472659 NCAPG2Q86XI2 1143 aa22■■□□□ 1.11
PKD1-209ENST00000472659 NPLOC4Q8TAT6 608 aa22■■□□□ 1.11
PKD1-209ENST00000472659 TCP11L1Q9NUJ3 509 aa22■■□□□ 1.11
PKD1-209ENST00000472659 FEM1BQ9UK73 627 aa22■■□□□ 1.11
PKD1-209ENST00000472659 NEDD4P46934 1319 aa22■■□□□ 1.11
PKD1-209ENST00000472659 RAD50Q92878 1312 aa22■■□□□ 1.11
PKD1-209ENST00000472659 BMP3P12645 472 aa21.99■■□□□ 1.11
PKD1-209ENST00000472659 CHMLP26374 656 aa21.99■■□□□ 1.11
PKD1-209ENST00000472659 STAT3P40763 770 aa21.99■■□□□ 1.11
PKD1-209ENST00000472659 RRP12Q5JTH9 1297 aaKnown RBP21.99■■□□□ 1.11
PKD1-209ENST00000472659 TOMM22Q9NS69 142 aa21.99■■□□□ 1.11
PKD1-209ENST00000472659 ZNF213O14771 459 aa21.98■■□□□ 1.11
PKD1-209ENST00000472659 ATP2A1O14983 1001 aa21.98■■□□□ 1.11
PKD1-209ENST00000472659 MFSD6Q6ZSS7 791 aa21.98■■□□□ 1.11
PKD1-209ENST00000472659 RASGRP2Q7LDG7 609 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms