RNA–Protein interactions for RNA: ENST00000472339.5

FXR1-209, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 5

Gene FXR1, Length 2,130 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-209ENST00000472339 PPFIA4O75335 1185 aa16.73■□□□□ 0.27
FXR1-209ENST00000472339 PRPF6O94906 941 aaKnown RBP16.73■□□□□ 0.27
FXR1-209ENST00000472339 SLC5A1P13866 664 aa16.73■□□□□ 0.27
FXR1-209ENST00000472339 CORO7P57737 925 aa16.73■□□□□ 0.27
FXR1-209ENST00000472339 CKAP4Q07065 602 aaKnown RBP16.73■□□□□ 0.27
FXR1-209ENST00000472339 TTC38Q5R3I4 469 aa16.73■□□□□ 0.27
FXR1-209ENST00000472339 ZNF658Q5TYW1 1059 aaPredicted RBP16.73■□□□□ 0.27
FXR1-209ENST00000472339 PAPD7Q5XG87 772 aaKnown RBP16.73■□□□□ 0.27
FXR1-209ENST00000472339 ZNF662Q6ZS27 426 aa16.73■□□□□ 0.27
FXR1-209ENST00000472339 OR8K1Q8NGG5 319 aa16.73■□□□□ 0.27
FXR1-209ENST00000472339 EIF3CQ99613 913 aaKnown RBP16.73■□□□□ 0.27
FXR1-209ENST00000472339 CHP1Q99653 195 aa16.73■□□□□ 0.27
FXR1-209ENST00000472339 HPCAL4Q9UM19 191 aa16.73■□□□□ 0.27
FXR1-209ENST00000472339 LRP5O75197 1615 aa16.73■□□□□ 0.27
FXR1-209ENST00000472339 MYH13Q9UKX3 1938 aa16.73■□□□□ 0.27
FXR1-209ENST00000472339 UBXN1Q04323 297 aa16.73■□□□□ 0.27
FXR1-209ENST00000472339 RASGRF1Q13972 1273 aa16.73■□□□□ 0.27
FXR1-209ENST00000472339 ZNF174Q15697 407 aa16.73■□□□□ 0.27
FXR1-209ENST00000472339 PDXDC2PQ6P474 469 aa16.73■□□□□ 0.27
FXR1-209ENST00000472339 EHBP1Q8NDI1 1231 aa16.73■□□□□ 0.27
FXR1-209ENST00000472339 BLZF1Q9H2G9 400 aa16.73■□□□□ 0.27
FXR1-209ENST00000472339 SAR1BQ9Y6B6 198 aa16.73■□□□□ 0.27
FXR1-209ENST00000472339 ANKRD36CQ5JPF3 1778 aa16.72■□□□□ 0.27
FXR1-209ENST00000472339 H7C1D1 291 aa16.72■□□□□ 0.27
FXR1-209ENST00000472339 PDE8AO60658 829 aa16.72■□□□□ 0.27
FXR1-209ENST00000472339 COBLO75128 1261 aa16.72■□□□□ 0.27
FXR1-209ENST00000472339 GPTP24298 496 aa16.72■□□□□ 0.27
FXR1-209ENST00000472339 PPARAQ07869 468 aa16.72■□□□□ 0.27
FXR1-209ENST00000472339 FUT2Q10981 343 aa16.72■□□□□ 0.27
FXR1-209ENST00000472339 COG1Q8WTW3 980 aa16.72■□□□□ 0.27
FXR1-209ENST00000472339 ESR2Q92731 530 aa16.72■□□□□ 0.27
FXR1-209ENST00000472339 STAMQ92783 540 aa16.72■□□□□ 0.27
FXR1-209ENST00000472339 TNFRSF25Q93038 417 aa16.72■□□□□ 0.27
FXR1-209ENST00000472339 ZBTB9Q96C00 473 aa16.72■□□□□ 0.27
FXR1-209ENST00000472339 DNAJC7Q99615 494 aa16.72■□□□□ 0.27
FXR1-209ENST00000472339 TNKSO95271 1327 aa16.72■□□□□ 0.27
FXR1-209ENST00000472339 A0A1W2PQC6 194 aa16.72■□□□□ 0.27
FXR1-209ENST00000472339 WNT7AO00755 349 aa16.72■□□□□ 0.27
FXR1-209ENST00000472339 PTGDRQ13258 359 aa16.72■□□□□ 0.27
FXR1-209ENST00000472339 HLFQ16534 295 aa16.72■□□□□ 0.27
FXR1-209ENST00000472339 TSR1Q2NL82 804 aaKnown RBP16.72■□□□□ 0.27
FXR1-209ENST00000472339 PPM1EQ8WY54 764 aa16.72■□□□□ 0.27
FXR1-209ENST00000472339 ZFP91Q96JP5 570 aaPredicted RBP16.72■□□□□ 0.27
FXR1-209ENST00000472339 MMS19Q96T76 1030 aa16.72■□□□□ 0.27
FXR1-209ENST00000472339 RBM28Q9NW13 759 aaKnown RBP16.72■□□□□ 0.27
FXR1-209ENST00000472339 TRIM10Q9UDY6 481 aa16.72■□□□□ 0.27
FXR1-209ENST00000472339 TTC26A0AVF1 554 aa16.71■□□□□ 0.27
FXR1-209ENST00000472339 ATF3P18847 181 aa16.71■□□□□ 0.27
FXR1-209ENST00000472339 KRT83P78385 493 aa16.71■□□□□ 0.27
FXR1-209ENST00000472339 TTC31Q49AM3 519 aaPredicted RBP16.71■□□□□ 0.27
FXR1-209ENST00000472339 TOM1L2Q6ZVM7 507 aa16.71■□□□□ 0.27
FXR1-209ENST00000472339 DNAJC10Q8IXB1 793 aa16.71■□□□□ 0.27
FXR1-209ENST00000472339 ANAPC4Q9UJX5 808 aa16.71■□□□□ 0.27
FXR1-209ENST00000472339 LUC7L2Q9Y383 392 aaKnown RBP16.71■□□□□ 0.27
FXR1-209ENST00000472339 ZC3H4Q9UPT8 1303 aaKnown RBP16.71■□□□□ 0.27
FXR1-209ENST00000472339 PLCH1Q4KWH8 1693 aa16.71■□□□□ 0.27
FXR1-209ENST00000472339 PRDM1O75626 825 aa16.7■□□□□ 0.26
FXR1-209ENST00000472339 STARD3NLO95772 234 aa16.7■□□□□ 0.26
FXR1-209ENST00000472339 ATP1A1P05023 1023 aaKnown RBP16.7■□□□□ 0.26
FXR1-209ENST00000472339 STIM1Q13586 685 aa16.7■□□□□ 0.26
FXR1-209ENST00000472339 CCDC122Q5T0U0 273 aa16.7■□□□□ 0.26
FXR1-209ENST00000472339 MB21D1Q8N884 522 aa16.7■□□□□ 0.26
FXR1-209ENST00000472339 HDAC6Q9UBN7 1215 aa16.7■□□□□ 0.26
FXR1-209ENST00000472339 CAPN11Q9UMQ6 739 aa16.7■□□□□ 0.26
FXR1-209ENST00000472339 V9GY48 417 aaPredicted RBP16.7■□□□□ 0.26
FXR1-209ENST00000472339 COL22A1Q8NFW1 1626 aaPredicted RBP16.7■□□□□ 0.26
FXR1-209ENST00000472339 SHANK3Q9BYB0 1731 aa16.7■□□□□ 0.26
FXR1-209ENST00000472339 LGALS16A8MUM7 142 aa16.7■□□□□ 0.26
FXR1-209ENST00000472339 ENC1O14682 589 aa16.7■□□□□ 0.26
FXR1-209ENST00000472339 RPN1P04843 607 aaKnown RBP16.7■□□□□ 0.26
FXR1-209ENST00000472339 PARP1P09874 1014 aaKnown RBP16.7■□□□□ 0.26
FXR1-209ENST00000472339 TRAPPC10P48553 1259 aa16.7■□□□□ 0.26
FXR1-209ENST00000472339 HERVK_113P62684 666 aa16.7■□□□□ 0.26
FXR1-209ENST00000472339 CATIPQ7Z7H3 387 aa16.7■□□□□ 0.26
FXR1-209ENST00000472339 HELBQ8NG08 1087 aaPredicted RBP16.7■□□□□ 0.26
FXR1-209ENST00000472339 MTRQ99707 1265 aa16.7■□□□□ 0.26
FXR1-209ENST00000472339 TRMT112Q9UI30 125 aaKnown RBP16.7■□□□□ 0.26
FXR1-209ENST00000472339 NPY5RQ15761 445 aa16.69■□□□□ 0.26
FXR1-209ENST00000472339 SMARCC1Q92922 1105 aaPredicted RBP16.69■□□□□ 0.26
FXR1-209ENST00000472339 TMOD3Q9NYL9 352 aa16.69■□□□□ 0.26
FXR1-209ENST00000472339 KRT86O43790 486 aa16.69■□□□□ 0.26
FXR1-209ENST00000472339 CALM1P0DP23 149 aa16.69■□□□□ 0.26
FXR1-209ENST00000472339 CALM2P0DP24 149 aa16.69■□□□□ 0.26
FXR1-209ENST00000472339 CALM3P0DP25 149 aa16.69■□□□□ 0.26
FXR1-209ENST00000472339 IL2RBP14784 551 aa16.69■□□□□ 0.26
FXR1-209ENST00000472339 EEF1GP26641 437 aaKnown RBP16.69■□□□□ 0.26
FXR1-209ENST00000472339 DNAJC21Q5F1R6 531 aaKnown RBP16.69■□□□□ 0.26
FXR1-209ENST00000472339 IRF2BP1Q8IU81 584 aa16.69■□□□□ 0.26
FXR1-209ENST00000472339 EFCAB13Q8IY85 973 aa16.69■□□□□ 0.26
FXR1-209ENST00000472339 ZSCAN10Q96SZ4 725 aaPredicted RBP16.69■□□□□ 0.26
FXR1-209ENST00000472339 CRACR2AQ9BSW2 395 aa16.69■□□□□ 0.26
FXR1-209ENST00000472339 SPATA31A3Q5VYP0 1347 aa16.69■□□□□ 0.26
FXR1-209ENST00000472339 SHOX2O60902 331 aaPredicted RBP16.68■□□□□ 0.26
FXR1-209ENST00000472339 PRCPP42785 496 aa16.68■□□□□ 0.26
FXR1-209ENST00000472339 MEA1Q16626 185 aa16.68■□□□□ 0.26
FXR1-209ENST00000472339 WDR59Q6PJI9 974 aa16.68■□□□□ 0.26
FXR1-209ENST00000472339 ENAHQ8N8S7 591 aaPredicted RBP16.68■□□□□ 0.26
FXR1-209ENST00000472339 ZNF507Q8TCN5 953 aa16.68■□□□□ 0.26
FXR1-209ENST00000472339 JAKMIP2Q96AA8 810 aa16.68■□□□□ 0.26
FXR1-209ENST00000472339 FAM107BQ9H098 131 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms