RNA–Protein interactions for RNA: ENST00000472170.1

TSPAN1-205, Transcript of tetraspanin 1, humanhuman

TSL 3

Gene TSPAN1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-205ENST00000472170 DPF3Q92784 378 aa9.9□□□□□ -0.82
TSPAN1-205ENST00000472170 MKL1Q969V6 931 aa9.9□□□□□ -0.82
TSPAN1-205ENST00000472170 SLF1Q9BQI6 1058 aa9.9□□□□□ -0.82
TSPAN1-205ENST00000472170 SPATC1LQ9H0A9 340 aa9.9□□□□□ -0.82
TSPAN1-205ENST00000472170 MTMR4Q9NYA4 1195 aa9.9□□□□□ -0.82
TSPAN1-205ENST00000472170 FEM1BQ9UK73 627 aa9.9□□□□□ -0.82
TSPAN1-205ENST00000472170 GJD2Q9UKL4 321 aa9.9□□□□□ -0.82
TSPAN1-205ENST00000472170 STX8Q9UNK0 236 aa9.9□□□□□ -0.82
TSPAN1-205ENST00000472170 ROBO3Q96MS0 1386 aa9.89□□□□□ -0.83
TSPAN1-205ENST00000472170 FGAP02671 866 aa9.89□□□□□ -0.83
TSPAN1-205ENST00000472170 NEFLP07196 543 aa9.89□□□□□ -0.83
TSPAN1-205ENST00000472170 HSPD1P10809 573 aaKnown RBP9.89□□□□□ -0.83
TSPAN1-205ENST00000472170 BMP3P12645 472 aa9.89□□□□□ -0.83
TSPAN1-205ENST00000472170 PRKCSHP14314 528 aaPredicted RBP9.89□□□□□ -0.83
TSPAN1-205ENST00000472170 STAT3P40763 770 aa9.89□□□□□ -0.83
TSPAN1-205ENST00000472170 SLC1A4P43007 532 aa9.89□□□□□ -0.83
TSPAN1-205ENST00000472170 SLC4A3P48751 1232 aa9.89□□□□□ -0.83
TSPAN1-205ENST00000472170 EVX2Q03828 476 aa9.89□□□□□ -0.83
TSPAN1-205ENST00000472170 CTDSPL2Q05D32 466 aa9.89□□□□□ -0.83
TSPAN1-205ENST00000472170 KCTD2Q14681 263 aa9.89□□□□□ -0.83
TSPAN1-205ENST00000472170 IMMTQ16891 758 aaKnown RBP9.89□□□□□ -0.83
TSPAN1-205ENST00000472170 FAM47AQ5JRC9 791 aa9.89□□□□□ -0.83
TSPAN1-205ENST00000472170 FAM83BQ5T0W9 1011 aa9.89□□□□□ -0.83
TSPAN1-205ENST00000472170 SLFN13Q68D06 897 aa9.89□□□□□ -0.83
TSPAN1-205ENST00000472170 ABRAQ8N0Z2 381 aa9.89□□□□□ -0.83
TSPAN1-205ENST00000472170 U2AF1L4Q8WU68 220 aaKnown RBP9.89□□□□□ -0.83
TSPAN1-205ENST00000472170 ESR2Q92731 530 aa9.89□□□□□ -0.83
TSPAN1-205ENST00000472170 DDX11Q96FC9 970 aa9.89□□□□□ -0.83
TSPAN1-205ENST00000472170 CEP95Q96GE4 821 aa9.89□□□□□ -0.83
TSPAN1-205ENST00000472170 FAM227BQ96M60 508 aa9.89□□□□□ -0.83
TSPAN1-205ENST00000472170 DEFB118Q96PH6 123 aa9.89□□□□□ -0.83
TSPAN1-205ENST00000472170 APBA2Q99767 749 aa9.89□□□□□ -0.83
TSPAN1-205ENST00000472170 UNC93B1Q9H1C4 597 aa9.89□□□□□ -0.83
TSPAN1-205ENST00000472170 EPB41L4AQ9HCS5 686 aaPredicted RBP9.89□□□□□ -0.83
TSPAN1-205ENST00000472170 ANAPC4Q9UJX5 808 aa9.89□□□□□ -0.83
TSPAN1-205ENST00000472170 NR2E3Q9Y5X4 410 aa9.89□□□□□ -0.83
TSPAN1-205ENST00000472170 MSCO60682 206 aa9.88□□□□□ -0.83
TSPAN1-205ENST00000472170 ERCC3P19447 782 aa9.88□□□□□ -0.83
TSPAN1-205ENST00000472170 CNGA1P29973 690 aa9.88□□□□□ -0.83
TSPAN1-205ENST00000472170 TRDNQ13061 729 aa9.88□□□□□ -0.83
TSPAN1-205ENST00000472170 MORN1Q5T089 497 aa9.88□□□□□ -0.83
TSPAN1-205ENST00000472170 KIAA1211Q6ZU35 1233 aa9.88□□□□□ -0.83
TSPAN1-205ENST00000472170 FAM160B2Q86V87 743 aa9.88□□□□□ -0.83
TSPAN1-205ENST00000472170 IQCA1Q86XH1 822 aa9.88□□□□□ -0.83
TSPAN1-205ENST00000472170 SIAH1Q8IUQ4 282 aa9.88□□□□□ -0.83
TSPAN1-205ENST00000472170 GMCL1P1Q8NEA9 526 aa9.88□□□□□ -0.83
TSPAN1-205ENST00000472170 ATG4CQ96DT6 458 aa9.88□□□□□ -0.83
TSPAN1-205ENST00000472170 TTC14Q96N46 770 aa9.88□□□□□ -0.83
TSPAN1-205ENST00000472170 MOV10L1Q9BXT6 1211 aaKnown RBP9.88□□□□□ -0.83
TSPAN1-205ENST00000472170 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.88□□□□□ -0.83
TSPAN1-205ENST00000472170 PORCNQ9H237 461 aa9.88□□□□□ -0.83
TSPAN1-205ENST00000472170 BTBD7Q9P203 1132 aa9.88□□□□□ -0.83
TSPAN1-205ENST00000472170 PNMA2Q9UL42 364 aa9.88□□□□□ -0.83
TSPAN1-205ENST00000472170 PPP1R9AQ9ULJ8 1098 aa9.88□□□□□ -0.83
TSPAN1-205ENST00000472170 DDX60LQ5H9U9 1706 aaKnown RBP9.87□□□□□ -0.83
TSPAN1-205ENST00000472170 A0A0D9SFI3 127 aa9.87□□□□□ -0.83
TSPAN1-205ENST00000472170 VWA5AO00534 786 aa9.87□□□□□ -0.83
TSPAN1-205ENST00000472170 ORC4O43929 436 aa9.87□□□□□ -0.83
TSPAN1-205ENST00000472170 FARP2O94887 1054 aaPredicted RBP9.87□□□□□ -0.83
TSPAN1-205ENST00000472170 NDUFB10O96000 172 aa9.87□□□□□ -0.83
TSPAN1-205ENST00000472170 PRKAR2AP13861 404 aaKnown RBP9.87□□□□□ -0.83
TSPAN1-205ENST00000472170 STAT2P52630 851 aa9.87□□□□□ -0.83
TSPAN1-205ENST00000472170 AKNAD1Q5T1N1 836 aa9.87□□□□□ -0.83
TSPAN1-205ENST00000472170 RCSD1Q6JBY9 416 aa9.87□□□□□ -0.83
TSPAN1-205ENST00000472170 NECAB2Q7Z6G3 386 aa9.87□□□□□ -0.83
TSPAN1-205ENST00000472170 RIOX2Q8IUF8 465 aa9.87□□□□□ -0.83
TSPAN1-205ENST00000472170 CLEC10AQ8IUN9 316 aa9.87□□□□□ -0.83
TSPAN1-205ENST00000472170 ANKLE1Q8NAG6 615 aa9.87□□□□□ -0.83
TSPAN1-205ENST00000472170 KIFC2Q96AC6 838 aa9.87□□□□□ -0.83
TSPAN1-205ENST00000472170 MMP19Q99542 508 aa9.87□□□□□ -0.83
TSPAN1-205ENST00000472170 DSCC1Q9BVC3 393 aa9.87□□□□□ -0.83
TSPAN1-205ENST00000472170 TEX13BQ9BXU2 312 aa9.87□□□□□ -0.83
TSPAN1-205ENST00000472170 KRT23Q9C075 422 aa9.87□□□□□ -0.83
TSPAN1-205ENST00000472170 FBXO40Q9UH90 709 aa9.87□□□□□ -0.83
TSPAN1-205ENST00000472170 ZSWIM8A7E2V4 1837 aa9.86□□□□□ -0.83
TSPAN1-205ENST00000472170 ZMYM6O95789 1325 aa9.86□□□□□ -0.83
TSPAN1-205ENST00000472170 MYH4Q9Y623 1939 aa9.86□□□□□ -0.83
TSPAN1-205ENST00000472170 TMEM232C9JQI7 657 aa9.86□□□□□ -0.83
TSPAN1-205ENST00000472170 SMIM22K7EJ46 135 aa9.86□□□□□ -0.83
TSPAN1-205ENST00000472170 PEX10O60683 326 aa9.86□□□□□ -0.83
TSPAN1-205ENST00000472170 CNMDO75829 334 aa9.86□□□□□ -0.83
TSPAN1-205ENST00000472170 TOP1P11387 765 aaKnown RBP9.86□□□□□ -0.83
TSPAN1-205ENST00000472170 MCCP23508 829 aa9.86□□□□□ -0.83
TSPAN1-205ENST00000472170 ADORA2AP29274 412 aa9.86□□□□□ -0.83
TSPAN1-205ENST00000472170 GRB14Q14449 540 aa9.86□□□□□ -0.83
TSPAN1-205ENST00000472170 TTC22Q5TAA0 569 aa9.86□□□□□ -0.83
TSPAN1-205ENST00000472170 VPS53Q5VIR6 699 aa9.86□□□□□ -0.83
TSPAN1-205ENST00000472170 CASC1Q6TDU7 716 aa9.86□□□□□ -0.83
TSPAN1-205ENST00000472170 CPXCR1Q8N123 301 aa9.86□□□□□ -0.83
TSPAN1-205ENST00000472170 LRRC47Q8N1G4 583 aaKnown RBP9.86□□□□□ -0.83
TSPAN1-205ENST00000472170 STAG1Q8WVM7 1258 aa9.86□□□□□ -0.83
TSPAN1-205ENST00000472170 TRIB2Q92519 343 aa9.86□□□□□ -0.83
TSPAN1-205ENST00000472170 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.86□□□□□ -0.83
TSPAN1-205ENST00000472170 CNNM2Q9H8M5 875 aa9.86□□□□□ -0.83
TSPAN1-205ENST00000472170 TCP11L1Q9NUJ3 509 aa9.86□□□□□ -0.83
TSPAN1-205ENST00000472170 ADAMTS5Q9UNA0 930 aa9.86□□□□□ -0.83
TSPAN1-205ENST00000472170 RBBP6Q7Z6E9 1792 aaKnown RBP9.86□□□□□ -0.83
TSPAN1-205ENST00000472170 IGKV6D-41A0A0C4DH26 115 aa9.85□□□□□ -0.83
TSPAN1-205ENST00000472170 HOXC6P09630 235 aa9.85□□□□□ -0.83
TSPAN1-205ENST00000472170 FGRP09769 529 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms