RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 UHRF1Q96T88 793 aaPredicted RBP23.11■■□□□ 1.29
SORT1-203ENST00000471996 MMP19Q99542 508 aa23.11■■□□□ 1.29
SORT1-203ENST00000471996 RIOK1Q9BRS2 568 aaKnown RBP23.11■■□□□ 1.29
SORT1-203ENST00000471996 TBX21Q9UL17 535 aa23.11■■□□□ 1.29
SORT1-203ENST00000471996 DIS3Q9Y2L1 958 aaKnown RBP23.11■■□□□ 1.29
SORT1-203ENST00000471996 GRXCR1A8MXD5 290 aa23.1■■□□□ 1.29
SORT1-203ENST00000471996 PGK2P07205 417 aa23.1■■□□□ 1.29
SORT1-203ENST00000471996 ACLYP53396 1101 aa23.1■■□□□ 1.29
SORT1-203ENST00000471996 MAP3K12Q12852 859 aa23.1■■□□□ 1.29
SORT1-203ENST00000471996 ZNF792Q3KQV3 632 aa23.1■■□□□ 1.29
SORT1-203ENST00000471996 TMEM240Q5SV17 173 aa23.1■■□□□ 1.29
SORT1-203ENST00000471996 RASIP1Q5U651 963 aa23.1■■□□□ 1.29
SORT1-203ENST00000471996 CCDC174Q6PII3 467 aa23.1■■□□□ 1.29
SORT1-203ENST00000471996 CCDC129Q6ZRS4 1044 aa23.1■■□□□ 1.29
SORT1-203ENST00000471996 C16orf59Q7L2K0 433 aa23.1■■□□□ 1.29
SORT1-203ENST00000471996 TLR7Q9NYK1 1049 aaKnown RBP23.1■■□□□ 1.29
SORT1-203ENST00000471996 MYO5AQ9Y4I1 1855 aaKnown RBP23.1■■□□□ 1.29
SORT1-203ENST00000471996 PPIGQ13427 754 aaKnown RBP eCLIP23.09■■□□□ 1.29
SORT1-203ENST00000471996 TMEM179Q6ZVK1 233 aa23.09■■□□□ 1.29
SORT1-203ENST00000471996 LENG1Q96BZ8 264 aaPredicted RBP23.09■■□□□ 1.29
SORT1-203ENST00000471996 MOXD2PA6NHM9 499 aa23.08■■□□□ 1.29
SORT1-203ENST00000471996 EVX2Q03828 476 aa23.08■■□□□ 1.29
SORT1-203ENST00000471996 ADGRE1Q14246 886 aa23.08■■□□□ 1.29
SORT1-203ENST00000471996 RIOX2Q8IUF8 465 aa23.08■■□□□ 1.29
SORT1-203ENST00000471996 SIAH1Q8IUQ4 282 aa23.08■■□□□ 1.29
SORT1-203ENST00000471996 SPICE1Q8N0Z3 855 aa23.08■■□□□ 1.29
SORT1-203ENST00000471996 KLHDC9Q8NEP7 349 aa23.08■■□□□ 1.29
SORT1-203ENST00000471996 SSH3Q8TE77 659 aa23.08■■□□□ 1.29
SORT1-203ENST00000471996 CCDC8Q9H0W5 538 aaPredicted RBP23.08■■□□□ 1.29
SORT1-203ENST00000471996 ANTXR1Q9H6X2 564 aa23.08■■□□□ 1.29
SORT1-203ENST00000471996 TMX2Q9Y320 296 aa23.08■■□□□ 1.29
SORT1-203ENST00000471996 SURF6O75683 361 aaKnown RBP23.07■■□□□ 1.28
SORT1-203ENST00000471996 TRIM27P14373 513 aa23.07■■□□□ 1.28
SORT1-203ENST00000471996 KCTD2Q14681 263 aa23.07■■□□□ 1.28
SORT1-203ENST00000471996 CCDC85BQ15834 202 aaPredicted RBP23.07■■□□□ 1.28
SORT1-203ENST00000471996 SAMD1Q6SPF0 538 aaPredicted RBP23.07■■□□□ 1.28
SORT1-203ENST00000471996 VCPKMTQ9H867 229 aa23.07■■□□□ 1.28
SORT1-203ENST00000471996 ARHGEF10LQ9HCE6 1279 aa23.07■■□□□ 1.28
SORT1-203ENST00000471996 MCM9Q9NXL9 1143 aa23.07■■□□□ 1.28
SORT1-203ENST00000471996 ADAMTS5Q9UNA0 930 aa23.07■■□□□ 1.28
SORT1-203ENST00000471996 CNPY2Q9Y2B0 182 aa23.07■■□□□ 1.28
SORT1-203ENST00000471996 SYNRGQ9UMZ2 1314 aa23.07■■□□□ 1.28
SORT1-203ENST00000471996 SMCHD1A6NHR9 2005 aa23.06■■□□□ 1.28
SORT1-203ENST00000471996 WDR46O15213 610 aaKnown RBP23.06■■□□□ 1.28
SORT1-203ENST00000471996 CCSAPQ6IQ19 270 aaPredicted RBP23.06■■□□□ 1.28
SORT1-203ENST00000471996 IL27Q8NEV9 243 aa23.06■■□□□ 1.28
SORT1-203ENST00000471996 EAF2Q96CJ1 260 aaPredicted RBP23.06■■□□□ 1.28
SORT1-203ENST00000471996 SH2D4AQ9H788 454 aa23.06■■□□□ 1.28
SORT1-203ENST00000471996 TNNQ9UQP3 1299 aa23.06■■□□□ 1.28
SORT1-203ENST00000471996 MROH7Q68CQ1 1323 aa23.06■■□□□ 1.28
SORT1-203ENST00000471996 MAGEB6P1A0A0J9YX57 407 aa23.05■■□□□ 1.28
SORT1-203ENST00000471996 IPO8O15397 1037 aaKnown RBP23.05■■□□□ 1.28
SORT1-203ENST00000471996 CDK7P50613 346 aa23.05■■□□□ 1.28
SORT1-203ENST00000471996 ATP8B2P98198 1209 aa23.05■■□□□ 1.28
SORT1-203ENST00000471996 KCNA10Q16322 511 aa23.05■■□□□ 1.28
SORT1-203ENST00000471996 CRNKL1Q9BZJ0 848 aaKnown RBP23.05■■□□□ 1.28
SORT1-203ENST00000471996 ELP1O95163 1332 aa23.05■■□□□ 1.28
SORT1-203ENST00000471996 CSF2RAP15509 400 aa23.04■■□□□ 1.28
SORT1-203ENST00000471996 IGFBP4P22692 258 aa23.04■■□□□ 1.28
SORT1-203ENST00000471996 PSRC1Q6PGN9 363 aaPredicted RBP23.04■■□□□ 1.28
SORT1-203ENST00000471996 ZNF365Q70YC5 407 aa23.04■■□□□ 1.28
SORT1-203ENST00000471996 CLEC10AQ8IUN9 316 aa23.04■■□□□ 1.28
SORT1-203ENST00000471996 TMEM199Q8N511 208 aa23.04■■□□□ 1.28
SORT1-203ENST00000471996 GLT1D1Q96MS3 346 aa23.04■■□□□ 1.28
SORT1-203ENST00000471996 SWAP70Q9UH65 585 aa23.04■■□□□ 1.28
SORT1-203ENST00000471996 FAM184BQ9ULE4 1060 aa23.04■■□□□ 1.28
SORT1-203ENST00000471996 NOP58Q9Y2X3 529 aaKnown RBP23.04■■□□□ 1.28
SORT1-203ENST00000471996 BCAR3O75815 825 aa23.03■■□□□ 1.28
SORT1-203ENST00000471996 ACRP10323 421 aa23.03■■□□□ 1.28
SORT1-203ENST00000471996 STAT3P40763 770 aa23.03■■□□□ 1.28
SORT1-203ENST00000471996 ICA1Q05084 483 aa23.03■■□□□ 1.28
SORT1-203ENST00000471996 RAB30Q15771 203 aa23.03■■□□□ 1.28
SORT1-203ENST00000471996 MSL3Q8N5Y2 521 aaKnown RBP23.03■■□□□ 1.28
SORT1-203ENST00000471996 MSRAQ9UJ68 235 aa23.03■■□□□ 1.28
SORT1-203ENST00000471996 AKR1B1P15121 316 aa23.02■■□□□ 1.28
SORT1-203ENST00000471996 COPB2P35606 906 aa23.02■■□□□ 1.28
SORT1-203ENST00000471996 C1QTNF1Q9BXJ1 281 aa23.02■■□□□ 1.28
SORT1-203ENST00000471996 DCP1AQ9NPI6 582 aaPredicted RBP23.02■■□□□ 1.28
SORT1-203ENST00000471996 FBXO28Q9NVF7 368 aa23.02■■□□□ 1.28
SORT1-203ENST00000471996 ZNF214Q9UL59 606 aaPredicted RBP23.02■■□□□ 1.28
SORT1-203ENST00000471996 MYADML2A6NDP7 307 aa23.01■■□□□ 1.27
SORT1-203ENST00000471996 VWA5AO00534 786 aa23.01■■□□□ 1.27
SORT1-203ENST00000471996 DUSP11O75319 330 aaKnown RBP23.01■■□□□ 1.27
SORT1-203ENST00000471996 SNAI1O95863 264 aaPredicted RBP23.01■■□□□ 1.27
SORT1-203ENST00000471996 CYP2D6P10635 497 aa23.01■■□□□ 1.27
SORT1-203ENST00000471996 CST5P28325 142 aaPredicted RBP23.01■■□□□ 1.27
SORT1-203ENST00000471996 HOXD11P31277 338 aaPredicted RBP23.01■■□□□ 1.27
SORT1-203ENST00000471996 CLUAP1Q96AJ1 413 aa23.01■■□□□ 1.27
SORT1-203ENST00000471996 CXXC1Q9P0U4 656 aaPredicted RBP23.01■■□□□ 1.27
SORT1-203ENST00000471996 SYNGAP1Q96PV0 1343 aa23.01■■□□□ 1.27
SORT1-203ENST00000471996 PCSK9Q8NBP7 692 aaKnown RBP23■■□□□ 1.27
SORT1-203ENST00000471996 REPS2Q8NFH8 660 aa23■■□□□ 1.27
SORT1-203ENST00000471996 SDR42E1Q8WUS8 393 aa23■■□□□ 1.27
SORT1-203ENST00000471996 HERVK_113Q902F9 699 aa23■■□□□ 1.27
SORT1-203ENST00000471996 DYNLL2Q96FJ2 89 aa23■■□□□ 1.27
SORT1-203ENST00000471996 PPP1R12CQ9BZL4 782 aa23■■□□□ 1.27
SORT1-203ENST00000471996 TSPYL2Q9H2G4 693 aaPredicted RBP23■■□□□ 1.27
SORT1-203ENST00000471996 NKX2-4Q9H2Z4 354 aa23■■□□□ 1.27
SORT1-203ENST00000471996 CHD9Q3L8U1 2897 aa22.99■■□□□ 1.27
SORT1-203ENST00000471996 ARVCFO00192 962 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms