RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 BMP3P12645 472 aa17.75■□□□□ 0.43
SNX13-205ENST00000471744 MCCP23508 829 aa17.75■□□□□ 0.43
SNX13-205ENST00000471744 DSG3P32926 999 aa17.75■□□□□ 0.43
SNX13-205ENST00000471744 HSPA4P34932 840 aa17.75■□□□□ 0.43
SNX13-205ENST00000471744 SLC1A4P43007 532 aa17.75■□□□□ 0.43
SNX13-205ENST00000471744 LACTBP83111 547 aaPredicted RBP17.75■□□□□ 0.43
SNX13-205ENST00000471744 RCSD1Q6JBY9 416 aa17.75■□□□□ 0.43
SNX13-205ENST00000471744 MB21D2Q8IYB1 491 aaPredicted RBP17.75■□□□□ 0.43
SNX13-205ENST00000471744 ANKRD13CQ8N6S4 541 aa17.75■□□□□ 0.43
SNX13-205ENST00000471744 DCAF4Q8WV16 495 aa17.75■□□□□ 0.43
SNX13-205ENST00000471744 ZKSCAN3Q9BRR0 538 aa17.75■□□□□ 0.43
SNX13-205ENST00000471744 FEM1BQ9UK73 627 aa17.75■□□□□ 0.43
SNX13-205ENST00000471744 DOCK3Q8IZD9 2030 aa17.74■□□□□ 0.43
SNX13-205ENST00000471744 MCM5P33992 734 aa17.74■□□□□ 0.43
SNX13-205ENST00000471744 CYB5R4Q7L1T6 521 aa17.74■□□□□ 0.43
SNX13-205ENST00000471744 ENAHQ8N8S7 591 aaPredicted RBP17.74■□□□□ 0.43
SNX13-205ENST00000471744 GPRC5AQ8NFJ5 357 aa17.74■□□□□ 0.43
SNX13-205ENST00000471744 KCNB2Q92953 911 aa17.74■□□□□ 0.43
SNX13-205ENST00000471744 KAT14Q9H8E8 782 aa17.74■□□□□ 0.43
SNX13-205ENST00000471744 TAF6LQ9Y6J9 622 aa17.74■□□□□ 0.43
SNX13-205ENST00000471744 A0A0G2JMZ2 1700 aa17.74■□□□□ 0.43
SNX13-205ENST00000471744 COL11A1P12107 1806 aaPredicted RBP17.73■□□□□ 0.43
SNX13-205ENST00000471744 PLA2G6O60733 806 aa17.73■□□□□ 0.43
SNX13-205ENST00000471744 HMGB1P09429 215 aaKnown RBP17.73■□□□□ 0.43
SNX13-205ENST00000471744 FDX1P10109 184 aa17.73■□□□□ 0.43
SNX13-205ENST00000471744 CCNA1P78396 465 aa17.73■□□□□ 0.43
SNX13-205ENST00000471744 PKN2Q16513 984 aaKnown RBP17.73■□□□□ 0.43
SNX13-205ENST00000471744 IFIT1BQ5T764 474 aaKnown RBP17.73■□□□□ 0.43
SNX13-205ENST00000471744 IFFO2Q5TF58 517 aa17.73■□□□□ 0.43
SNX13-205ENST00000471744 CTU1Q7Z7A3 348 aaKnown RBP17.73■□□□□ 0.43
SNX13-205ENST00000471744 FAM160B2Q86V87 743 aa17.73■□□□□ 0.43
SNX13-205ENST00000471744 NKX2-3Q8TAU0 364 aa17.73■□□□□ 0.43
SNX13-205ENST00000471744 CD99L2Q8TCZ2 262 aa17.73■□□□□ 0.43
SNX13-205ENST00000471744 CHURC1Q8WUH1 139 aa17.73■□□□□ 0.43
SNX13-205ENST00000471744 SLF1Q9BQI6 1058 aa17.73■□□□□ 0.43
SNX13-205ENST00000471744 PPP1R9AQ9ULJ8 1098 aa17.73■□□□□ 0.43
SNX13-205ENST00000471744 IFIT3O14879 490 aaKnown RBP17.72■□□□□ 0.43
SNX13-205ENST00000471744 HOXD10P28358 340 aa17.72■□□□□ 0.43
SNX13-205ENST00000471744 STAT2P52630 851 aa17.72■□□□□ 0.43
SNX13-205ENST00000471744 FCGRTP55899 365 aa17.72■□□□□ 0.43
SNX13-205ENST00000471744 ERVK-9P63128 1117 aa17.72■□□□□ 0.43
SNX13-205ENST00000471744 ERVK-24P63145 666 aa17.72■□□□□ 0.43
SNX13-205ENST00000471744 SEC23AQ15436 765 aa17.72■□□□□ 0.43
SNX13-205ENST00000471744 PRPF38AQ8NAV1 312 aaKnown RBP17.72■□□□□ 0.43
SNX13-205ENST00000471744 PNMA1Q8ND90 353 aa17.72■□□□□ 0.43
SNX13-205ENST00000471744 TMEM87BQ96K49 555 aa17.72■□□□□ 0.43
SNX13-205ENST00000471744 NEK1Q96PY6 1258 aa17.72■□□□□ 0.43
SNX13-205ENST00000471744 NUP88Q99567 741 aaPredicted RBP17.72■□□□□ 0.43
SNX13-205ENST00000471744 PAGR1Q9BTK6 254 aa17.72■□□□□ 0.43
SNX13-205ENST00000471744 USP26Q9BXU7 913 aa17.72■□□□□ 0.43
SNX13-205ENST00000471744 EFCC1Q9HA90 598 aa17.72■□□□□ 0.43
SNX13-205ENST00000471744 RBPJLQ9UBG7 517 aa17.72■□□□□ 0.43
SNX13-205ENST00000471744 ISY1Q9ULR0 285 aaKnown RBP17.72■□□□□ 0.43
SNX13-205ENST00000471744 WDR19Q8NEZ3 1342 aa17.72■□□□□ 0.43
SNX13-205ENST00000471744 PSMC4P43686 418 aa17.71■□□□□ 0.43
SNX13-205ENST00000471744 PRMT2P55345 433 aa17.71■□□□□ 0.43
SNX13-205ENST00000471744 WTAPQ15007 396 aa17.71■□□□□ 0.43
SNX13-205ENST00000471744 CCDC96Q2M329 555 aa17.71■□□□□ 0.43
SNX13-205ENST00000471744 GPATCH4Q5T3I0 446 aaKnown RBP17.71■□□□□ 0.43
SNX13-205ENST00000471744 TMTC2Q8N394 836 aa17.71■□□□□ 0.43
SNX13-205ENST00000471744 TXNRD2Q9NNW7 524 aa17.71■□□□□ 0.43
SNX13-205ENST00000471744 ADAMTS5Q9UNA0 930 aa17.71■□□□□ 0.43
SNX13-205ENST00000471744 TMEM232C9JQI7 657 aa17.7■□□□□ 0.42
SNX13-205ENST00000471744 PRC1O43663 620 aa17.7■□□□□ 0.42
SNX13-205ENST00000471744 SNHG28P0DPA3 235 aa17.7■□□□□ 0.42
SNX13-205ENST00000471744 PDHBP11177 359 aa17.7■□□□□ 0.42
SNX13-205ENST00000471744 PSMA5P28066 241 aa17.7■□□□□ 0.42
SNX13-205ENST00000471744 MAPK4P31152 587 aa17.7■□□□□ 0.42
SNX13-205ENST00000471744 ANTXR2P58335 489 aa17.7■□□□□ 0.42
SNX13-205ENST00000471744 IKQ13123 557 aaPredicted RBP17.7■□□□□ 0.42
SNX13-205ENST00000471744 TMEM67Q5HYA8 995 aa17.7■□□□□ 0.42
SNX13-205ENST00000471744 CCAR1Q8IX12 1150 aaKnown RBP17.7■□□□□ 0.42
SNX13-205ENST00000471744 RASEFQ8IZ41 740 aa17.7■□□□□ 0.42
SNX13-205ENST00000471744 ATG4CQ96DT6 458 aa17.7■□□□□ 0.42
SNX13-205ENST00000471744 FBXO28Q9NVF7 368 aa17.7■□□□□ 0.42
SNX13-205ENST00000471744 TRIM17Q9Y577 477 aa17.7■□□□□ 0.42
SNX13-205ENST00000471744 CTDP1Q9Y5B0 961 aaPredicted RBP17.7■□□□□ 0.42
SNX13-205ENST00000471744 VWA5AO00534 786 aa17.69■□□□□ 0.42
SNX13-205ENST00000471744 FMNL1O95466 1100 aaPredicted RBP17.69■□□□□ 0.42
SNX13-205ENST00000471744 COPB2P35606 906 aa17.69■□□□□ 0.42
SNX13-205ENST00000471744 SAMD1Q6SPF0 538 aaPredicted RBP17.69■□□□□ 0.42
SNX13-205ENST00000471744 DHX32Q7L7V1 743 aaKnown RBP17.69■□□□□ 0.42
SNX13-205ENST00000471744 OTOP1Q7RTM1 612 aa17.69■□□□□ 0.42
SNX13-205ENST00000471744 IGDCC4Q8TDY8 1250 aa17.69■□□□□ 0.42
SNX13-205ENST00000471744 COA7Q96BR5 231 aa17.69■□□□□ 0.42
SNX13-205ENST00000471744 MTMR7Q9Y216 660 aa17.69■□□□□ 0.42
SNX13-205ENST00000471744 SNX14Q9Y5W7 946 aa17.69■□□□□ 0.42
SNX13-205ENST00000471744 ZSWIM8A7E2V4 1837 aa17.68■□□□□ 0.42
SNX13-205ENST00000471744 TNPO2O14787 897 aaKnown RBP17.68■□□□□ 0.42
SNX13-205ENST00000471744 ZBED4O75132 1171 aa17.68■□□□□ 0.42
SNX13-205ENST00000471744 CNMDO75829 334 aa17.68■□□□□ 0.42
SNX13-205ENST00000471744 LIFRP42702 1097 aa17.68■□□□□ 0.42
SNX13-205ENST00000471744 ZNF543Q08ER8 600 aa17.68■□□□□ 0.42
SNX13-205ENST00000471744 ASPRV1Q53RT3 343 aa17.68■□□□□ 0.42
SNX13-205ENST00000471744 BTNL9Q6UXG8 535 aa17.68■□□□□ 0.42
SNX13-205ENST00000471744 KCTD1Q719H9 257 aa17.68■□□□□ 0.42
SNX13-205ENST00000471744 CHST3Q7LGC8 479 aa17.68■□□□□ 0.42
SNX13-205ENST00000471744 SHCBP1Q8NEM2 672 aa17.68■□□□□ 0.42
SNX13-205ENST00000471744 KIFC2Q96AC6 838 aa17.68■□□□□ 0.42
SNX13-205ENST00000471744 BTBD7Q9P203 1132 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms