RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 PARK7Q99497 189 aaKnown RBP16.44■□□□□ 0.22
SSR4-207ENST00000471724 CFHR5Q9BXR6 569 aa16.44■□□□□ 0.22
SSR4-207ENST00000471724 UPF3BQ9BZI7 483 aaKnown RBP16.44■□□□□ 0.22
SSR4-207ENST00000471724 TANGO6Q9C0B7 1094 aa16.44■□□□□ 0.22
SSR4-207ENST00000471724 RPAP3Q9H6T3 665 aaPredicted RBP16.44■□□□□ 0.22
SSR4-207ENST00000471724 USP17L15C9J2P7 530 aa16.43■□□□□ 0.22
SSR4-207ENST00000471724 USP17L13C9JLJ4 530 aa16.43■□□□□ 0.22
SSR4-207ENST00000471724 USP17L11C9JVI0 530 aa16.43■□□□□ 0.22
SSR4-207ENST00000471724 USP17L18D6R9N7 530 aa16.43■□□□□ 0.22
SSR4-207ENST00000471724 USP17L22D6RA61 530 aa16.43■□□□□ 0.22
SSR4-207ENST00000471724 USP17L17D6RBQ6 530 aa16.43■□□□□ 0.22
SSR4-207ENST00000471724 USP17L19D6RCP7 530 aa16.43■□□□□ 0.22
SSR4-207ENST00000471724 USP17L20D6RJB6 530 aa16.43■□□□□ 0.22
SSR4-207ENST00000471724 PDHXO00330 501 aa16.43■□□□□ 0.22
SSR4-207ENST00000471724 BMP3P12645 472 aa16.43■□□□□ 0.22
SSR4-207ENST00000471724 OSBPP22059 807 aa16.43■□□□□ 0.22
SSR4-207ENST00000471724 HOXA7P31268 230 aaPredicted RBP16.43■□□□□ 0.22
SSR4-207ENST00000471724 USP17L24Q0WX57 530 aa16.43■□□□□ 0.22
SSR4-207ENST00000471724 COL9A3Q14050 684 aaPredicted RBP16.43■□□□□ 0.22
SSR4-207ENST00000471724 CCDC96Q2M329 555 aa16.43■□□□□ 0.22
SSR4-207ENST00000471724 NOM1Q5C9Z4 860 aaKnown RBP16.43■□□□□ 0.22
SSR4-207ENST00000471724 GPATCH4Q5T3I0 446 aaKnown RBP16.43■□□□□ 0.22
SSR4-207ENST00000471724 IFFO2Q5TF58 517 aa16.43■□□□□ 0.22
SSR4-207ENST00000471724 GPAT2Q6NUI2 795 aa16.43■□□□□ 0.22
SSR4-207ENST00000471724 FAM43AQ8N2R8 423 aa16.43■□□□□ 0.22
SSR4-207ENST00000471724 TCEANC2Q96MN5 208 aa16.43■□□□□ 0.22
SSR4-207ENST00000471724 LRRC2Q9BYS8 371 aa16.43■□□□□ 0.22
SSR4-207ENST00000471724 ISY1Q9ULR0 285 aaKnown RBP16.43■□□□□ 0.22
SSR4-207ENST00000471724 MYPNQ86TC9 1320 aa16.43■□□□□ 0.22
SSR4-207ENST00000471724 CALM1P0DP23 149 aa16.42■□□□□ 0.22
SSR4-207ENST00000471724 CALM2P0DP24 149 aa16.42■□□□□ 0.22
SSR4-207ENST00000471724 CALM3P0DP25 149 aa16.42■□□□□ 0.22
SSR4-207ENST00000471724 SNHG28P0DPA3 235 aa16.42■□□□□ 0.22
SSR4-207ENST00000471724 PDHBP11177 359 aa16.42■□□□□ 0.22
SSR4-207ENST00000471724 CPA1P15085 419 aa16.42■□□□□ 0.22
SSR4-207ENST00000471724 RCAN1P53805 252 aa16.42■□□□□ 0.22
SSR4-207ENST00000471724 RABEP1Q15276 862 aa16.42■□□□□ 0.22
SSR4-207ENST00000471724 TAF1CQ15572 869 aaPredicted RBP16.42■□□□□ 0.22
SSR4-207ENST00000471724 ASPRV1Q53RT3 343 aa16.42■□□□□ 0.22
SSR4-207ENST00000471724 FAM83BQ5T0W9 1011 aa16.42■□□□□ 0.22
SSR4-207ENST00000471724 SYNE3Q6ZMZ3 975 aa16.42■□□□□ 0.22
SSR4-207ENST00000471724 Q6ZUG5 572 aa16.42■□□□□ 0.22
SSR4-207ENST00000471724 ZNF654Q8IZM8 581 aa16.42■□□□□ 0.22
SSR4-207ENST00000471724 GTF3C2Q8WUA4 911 aaPredicted RBP16.42■□□□□ 0.22
SSR4-207ENST00000471724 PTPN18Q99952 460 aa16.42■□□□□ 0.22
SSR4-207ENST00000471724 AGXT2Q9BYV1 514 aa16.42■□□□□ 0.22
SSR4-207ENST00000471724 PDRG1Q9NUG6 133 aa16.42■□□□□ 0.22
SSR4-207ENST00000471724 SLC12A7Q9Y666 1083 aa16.42■□□□□ 0.22
SSR4-207ENST00000471724 CASP8AP2Q9UKL3 1982 aa16.42■□□□□ 0.22
SSR4-207ENST00000471724 STAT2P52630 851 aa16.41■□□□□ 0.22
SSR4-207ENST00000471724 ANKRD1Q15327 319 aa16.41■□□□□ 0.22
SSR4-207ENST00000471724 KIAA1755Q5JYT7 1200 aa16.41■□□□□ 0.22
SSR4-207ENST00000471724 APOA5Q6Q788 366 aa16.41■□□□□ 0.22
SSR4-207ENST00000471724 FAM160B2Q86V87 743 aa16.41■□□□□ 0.22
SSR4-207ENST00000471724 SMCR8Q8TEV9 937 aaPredicted RBP16.41■□□□□ 0.22
SSR4-207ENST00000471724 MAP3K14Q99558 947 aa16.41■□□□□ 0.22
SSR4-207ENST00000471724 MTMR7Q9Y216 660 aa16.41■□□□□ 0.22
SSR4-207ENST00000471724 FLOT1O75955 427 aa16.4■□□□□ 0.22
SSR4-207ENST00000471724 PARP1P09874 1014 aaKnown RBP16.4■□□□□ 0.22
SSR4-207ENST00000471724 KIF5BP33176 963 aa16.4■□□□□ 0.22
SSR4-207ENST00000471724 ZNF543Q08ER8 600 aa16.4■□□□□ 0.22
SSR4-207ENST00000471724 IKQ13123 557 aaPredicted RBP16.4■□□□□ 0.22
SSR4-207ENST00000471724 CATSPERGQ6ZRH7 1159 aa16.4■□□□□ 0.22
SSR4-207ENST00000471724 CTCFLQ8NI51 663 aaPredicted RBP16.4■□□□□ 0.22
SSR4-207ENST00000471724 BRF1Q92994 677 aa16.4■□□□□ 0.22
SSR4-207ENST00000471724 NUP88Q99567 741 aaPredicted RBP16.4■□□□□ 0.22
SSR4-207ENST00000471724 ASCC2Q9H1I8 757 aaPredicted RBP16.4■□□□□ 0.22
SSR4-207ENST00000471724 ALDH8A1Q9H2A2 487 aaPredicted RBP16.4■□□□□ 0.22
SSR4-207ENST00000471724 SENP2Q9HC62 589 aa16.4■□□□□ 0.22
SSR4-207ENST00000471724 ZFYVE28Q9HCC9 887 aa16.4■□□□□ 0.22
SSR4-207ENST00000471724 GPHNQ9NQX3 736 aaPredicted RBP16.4■□□□□ 0.22
SSR4-207ENST00000471724 FEM1BQ9UK73 627 aa16.4■□□□□ 0.22
SSR4-207ENST00000471724 NID2Q14112 1375 aa16.39■□□□□ 0.21
SSR4-207ENST00000471724 RBBP6Q7Z6E9 1792 aaKnown RBP16.39■□□□□ 0.21
SSR4-207ENST00000471724 KLF18A0A0U1RQI7 1052 aa16.39■□□□□ 0.21
SSR4-207ENST00000471724 PLA2G6O60733 806 aa16.39■□□□□ 0.21
SSR4-207ENST00000471724 TBC1D8O95759 1140 aa16.39■□□□□ 0.21
SSR4-207ENST00000471724 NEK4P51957 841 aa16.39■□□□□ 0.21
SSR4-207ENST00000471724 TROAPQ12815 778 aa16.39■□□□□ 0.21
SSR4-207ENST00000471724 COG2Q14746 738 aa16.39■□□□□ 0.21
SSR4-207ENST00000471724 GRM4Q14833 912 aa16.39■□□□□ 0.21
SSR4-207ENST00000471724 MICU3Q86XE3 530 aa16.39■□□□□ 0.21
SSR4-207ENST00000471724 CHURC1Q8WUH1 139 aa16.39■□□□□ 0.21
SSR4-207ENST00000471724 KIF2CQ99661 725 aa16.39■□□□□ 0.21
SSR4-207ENST00000471724 SLF1Q9BQI6 1058 aa16.39■□□□□ 0.21
SSR4-207ENST00000471724 MGAMO43451 1857 aa16.38■□□□□ 0.21
SSR4-207ENST00000471724 GOLGA8BA8MQT2 603 aa16.38■□□□□ 0.21
SSR4-207ENST00000471724 TMEM232C9JQI7 657 aa16.38■□□□□ 0.21
SSR4-207ENST00000471724 ZBTB43O43298 467 aa16.38■□□□□ 0.21
SSR4-207ENST00000471724 GCLCP48506 637 aaPredicted RBP16.38■□□□□ 0.21
SSR4-207ENST00000471724 HERVK_113P62684 666 aa16.38■□□□□ 0.21
SSR4-207ENST00000471724 TOB2Q14106 344 aaPredicted RBP16.38■□□□□ 0.21
SSR4-207ENST00000471724 LBX2Q6XYB7 198 aa16.38■□□□□ 0.21
SSR4-207ENST00000471724 KCTD1Q719H9 257 aa16.38■□□□□ 0.21
SSR4-207ENST00000471724 RASGRP2Q7LDG7 609 aa16.38■□□□□ 0.21
SSR4-207ENST00000471724 MB21D1Q8N884 522 aa16.38■□□□□ 0.21
SSR4-207ENST00000471724 NUP133Q8WUM0 1156 aa16.38■□□□□ 0.21
SSR4-207ENST00000471724 HOXC10Q9NYD6 342 aa16.38■□□□□ 0.21
SSR4-207ENST00000471724 PPP1R9AQ9ULJ8 1098 aa16.38■□□□□ 0.21
SSR4-207ENST00000471724 FRMPD2Q68DX3 1309 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms