RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 MPHOSPH6Q99547 160 aaKnown RBP4.2□□□□□ -1.74
SCN3A-207ENST00000471697 ARPC5LQ9BPX5 153 aa4.2□□□□□ -1.74
SCN3A-207ENST00000471697 PAGR1Q9BTK6 254 aa4.2□□□□□ -1.74
SCN3A-207ENST00000471697 INO80BQ9C086 356 aaPredicted RBP4.2□□□□□ -1.74
SCN3A-207ENST00000471697 ZNF408Q9H9D4 720 aa4.2□□□□□ -1.74
SCN3A-207ENST00000471697 CHST12Q9NRB3 414 aa4.2□□□□□ -1.74
SCN3A-207ENST00000471697 RAD18Q9NS91 495 aa4.2□□□□□ -1.74
SCN3A-207ENST00000471697 RTEL1Q9NZ71 1219 aa4.2□□□□□ -1.74
SCN3A-207ENST00000471697 ESYT3A0FGR9 886 aa4.19□□□□□ -1.74
SCN3A-207ENST00000471697 KCNQ2O43526 872 aa4.19□□□□□ -1.74
SCN3A-207ENST00000471697 BPNT1O95861 308 aa4.19□□□□□ -1.74
SCN3A-207ENST00000471697 SSBP05455 408 aaKnown RBP eCLIP4.19□□□□□ -1.74
SCN3A-207ENST00000471697 MYL1P05976 194 aa4.19□□□□□ -1.74
SCN3A-207ENST00000471697 HCLS1P14317 486 aaPredicted RBP4.19□□□□□ -1.74
SCN3A-207ENST00000471697 ETFBP38117 255 aa4.19□□□□□ -1.74
SCN3A-207ENST00000471697 CDKN1CP49918 316 aaPredicted RBP4.19□□□□□ -1.74
SCN3A-207ENST00000471697 EPHB1P54762 984 aa4.19□□□□□ -1.74
SCN3A-207ENST00000471697 LMOD3Q0VAK6 560 aa4.19□□□□□ -1.74
SCN3A-207ENST00000471697 IKZF1Q13422 519 aa4.19□□□□□ -1.74
SCN3A-207ENST00000471697 NFIXQ14938 502 aa4.19□□□□□ -1.74
SCN3A-207ENST00000471697 PPP2R5AQ15172 486 aa4.19□□□□□ -1.74
SCN3A-207ENST00000471697 ALKBH2Q6NS38 261 aa4.19□□□□□ -1.74
SCN3A-207ENST00000471697 RINLQ6ZS11 566 aa4.19□□□□□ -1.74
SCN3A-207ENST00000471697 C16orf86Q6ZW13 317 aa4.19□□□□□ -1.74
SCN3A-207ENST00000471697 ANKS3Q6ZW76 656 aa4.19□□□□□ -1.74
SCN3A-207ENST00000471697 FBF1Q8TES7 1133 aa4.19□□□□□ -1.74
SCN3A-207ENST00000471697 DIRC2Q96SL1 478 aa4.19□□□□□ -1.74
SCN3A-207ENST00000471697 NIF3L1Q9GZT8 377 aa4.19□□□□□ -1.74
SCN3A-207ENST00000471697 TMX4Q9H1E5 349 aaPredicted RBP4.19□□□□□ -1.74
SCN3A-207ENST00000471697 ZCCHC4Q9H5U6 513 aa4.19□□□□□ -1.74
SCN3A-207ENST00000471697 LGR6Q9HBX8 967 aa4.19□□□□□ -1.74
SCN3A-207ENST00000471697 TMEM260Q9NX78 707 aa4.19□□□□□ -1.74
SCN3A-207ENST00000471697 GGT7Q9UJ14 662 aa4.19□□□□□ -1.74
SCN3A-207ENST00000471697 FOXD3Q9UJU5 478 aaPredicted RBP4.19□□□□□ -1.74
SCN3A-207ENST00000471697 ETV2O00321 342 aaPredicted RBP4.18□□□□□ -1.74
SCN3A-207ENST00000471697 EPB41L2O43491 1005 aaKnown RBP4.18□□□□□ -1.74
SCN3A-207ENST00000471697 NRDCO43847 1150 aa4.18□□□□□ -1.74
SCN3A-207ENST00000471697 AOC2O75106 756 aa4.18□□□□□ -1.74
SCN3A-207ENST00000471697 EDN3P14138 238 aa4.18□□□□□ -1.74
SCN3A-207ENST00000471697 POU3F3P20264 500 aaPredicted RBP4.18□□□□□ -1.74
SCN3A-207ENST00000471697 RAPGEF1Q13905 1077 aa4.18□□□□□ -1.74
SCN3A-207ENST00000471697 TMEM95Q3KNT9 176 aa4.18□□□□□ -1.74
SCN3A-207ENST00000471697 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.18□□□□□ -1.74
SCN3A-207ENST00000471697 ARHGAP27Q6ZUM4 889 aa4.18□□□□□ -1.74
SCN3A-207ENST00000471697 JAMLQ86YT9 394 aa4.18□□□□□ -1.74
SCN3A-207ENST00000471697 FEZ1Q99689 392 aa4.18□□□□□ -1.74
SCN3A-207ENST00000471697 WDR18Q9BV38 432 aa4.18□□□□□ -1.74
SCN3A-207ENST00000471697 DUSP23Q9BVJ7 150 aa4.18□□□□□ -1.74
SCN3A-207ENST00000471697 TRIM55Q9BYV6 548 aa4.18□□□□□ -1.74
SCN3A-207ENST00000471697 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.18□□□□□ -1.74
SCN3A-207ENST00000471697 CCDC113Q9H0I3 377 aa4.18□□□□□ -1.74
SCN3A-207ENST00000471697 EPB41L4BQ9H329 900 aa4.18□□□□□ -1.74
SCN3A-207ENST00000471697 C19orf73Q9NVV2 129 aa4.18□□□□□ -1.74
SCN3A-207ENST00000471697 PPP1R9AQ9ULJ8 1098 aa4.18□□□□□ -1.74
SCN3A-207ENST00000471697 ATP8A1Q9Y2Q0 1164 aa4.18□□□□□ -1.74
SCN3A-207ENST00000471697 PITPNM2Q9BZ72 1349 aa4.18□□□□□ -1.74
SCN3A-207ENST00000471697 PNMA6FA0A0J9YX94 578 aa4.17□□□□□ -1.74
SCN3A-207ENST00000471697 EREGO14944 169 aa4.17□□□□□ -1.74
SCN3A-207ENST00000471697 TNFRSF21O75509 655 aa4.17□□□□□ -1.74
SCN3A-207ENST00000471697 LEFTY1O75610 366 aa4.17□□□□□ -1.74
SCN3A-207ENST00000471697 ALDH1L1O75891 902 aa4.17□□□□□ -1.74
SCN3A-207ENST00000471697 FOSP01100 380 aaPredicted RBP4.17□□□□□ -1.74
SCN3A-207ENST00000471697 PTMAP06454 111 aaKnown RBP4.17□□□□□ -1.74
SCN3A-207ENST00000471697 ADRB1P08588 477 aa4.17□□□□□ -1.74
SCN3A-207ENST00000471697 CALRP27797 417 aaKnown RBP4.17□□□□□ -1.74
SCN3A-207ENST00000471697 PMLP29590 882 aa4.17□□□□□ -1.74
SCN3A-207ENST00000471697 GDNFP39905 211 aa4.17□□□□□ -1.74
SCN3A-207ENST00000471697 USP5P45974 858 aa4.17□□□□□ -1.74
SCN3A-207ENST00000471697 POU5F1Q01860 360 aaKnown RBP4.17□□□□□ -1.74
SCN3A-207ENST00000471697 PCDH1Q08174 1060 aa4.17□□□□□ -1.74
SCN3A-207ENST00000471697 BRD3Q15059 726 aa4.17□□□□□ -1.74
SCN3A-207ENST00000471697 ZNF423Q2M1K9 1284 aa4.17□□□□□ -1.74
SCN3A-207ENST00000471697 SKOR2Q2VWA4 1001 aaPredicted RBP4.17□□□□□ -1.74
SCN3A-207ENST00000471697 ICE2Q659A1 982 aa4.17□□□□□ -1.74
SCN3A-207ENST00000471697 ERMP1Q7Z2K6 904 aa4.17□□□□□ -1.74
SCN3A-207ENST00000471697 PRRT2Q7Z6L0 340 aaPredicted RBP4.17□□□□□ -1.74
SCN3A-207ENST00000471697 ASAP3Q8TDY4 903 aa4.17□□□□□ -1.74
SCN3A-207ENST00000471697 FBXO41Q8TF61 875 aa4.17□□□□□ -1.74
SCN3A-207ENST00000471697 RUNDC1Q96C34 613 aa4.17□□□□□ -1.74
SCN3A-207ENST00000471697 SLC26A8Q96RN1 970 aa4.17□□□□□ -1.74
SCN3A-207ENST00000471697 DNAJC7Q99615 494 aa4.17□□□□□ -1.74
SCN3A-207ENST00000471697 TRIM56Q9BRZ2 755 aaKnown RBP4.17□□□□□ -1.74
SCN3A-207ENST00000471697 CLEC4MQ9H2X3 399 aaPredicted RBP4.17□□□□□ -1.74
SCN3A-207ENST00000471697 DCP1AQ9NPI6 582 aaPredicted RBP4.17□□□□□ -1.74
SCN3A-207ENST00000471697 ZNF69Q9UC07 566 aa4.17□□□□□ -1.74
SCN3A-207ENST00000471697 MSRB2Q9Y3D2 182 aa4.17□□□□□ -1.74
SCN3A-207ENST00000471697 CCDC163A0A0D9SF12 145 aa4.16□□□□□ -1.74
SCN3A-207ENST00000471697 ALG1L2C9J202 215 aa4.16□□□□□ -1.74
SCN3A-207ENST00000471697 TBX3O15119 743 aa4.16□□□□□ -1.74
SCN3A-207ENST00000471697 TMPRSS2O15393 492 aa4.16□□□□□ -1.74
SCN3A-207ENST00000471697 POLR3DP05423 398 aaPredicted RBP4.16□□□□□ -1.74
SCN3A-207ENST00000471697 PCSK2P16519 638 aa4.16□□□□□ -1.74
SCN3A-207ENST00000471697 EIF4BP23588 611 aaKnown RBP4.16□□□□□ -1.74
SCN3A-207ENST00000471697 SQSTM1Q13501 440 aa4.16□□□□□ -1.74
SCN3A-207ENST00000471697 MORC3Q14149 939 aa4.16□□□□□ -1.74
SCN3A-207ENST00000471697 TTF1Q15361 905 aaPredicted RBP4.16□□□□□ -1.74
SCN3A-207ENST00000471697 PPP4R4Q6NUP7 873 aa4.16□□□□□ -1.74
SCN3A-207ENST00000471697 CCDC174Q6PII3 467 aa4.16□□□□□ -1.74
SCN3A-207ENST00000471697 FAM214BQ7L5A3 538 aa4.16□□□□□ -1.74
SCN3A-207ENST00000471697 SPACA3Q8IXA5 215 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms