RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 PPP1R9BQ96SB3 815 aa9.5□□□□□ -0.89
CD47-204ENST00000471694 NOC4LQ9BVI4 516 aaKnown RBP9.5□□□□□ -0.89
CD47-204ENST00000471694 MKRN1Q9UHC7 482 aaKnown RBP9.5□□□□□ -0.89
CD47-204ENST00000471694 SEMA3EO15041 775 aa9.5□□□□□ -0.89
CD47-204ENST00000471694 THEM5Q8N1Q8 247 aa9.5□□□□□ -0.89
CD47-204ENST00000471694 DISC1Q9NRI5 854 aa9.5□□□□□ -0.89
CD47-204ENST00000471694 ABCF3Q9NUQ8 709 aa9.5□□□□□ -0.89
CD47-204ENST00000471694 SOS1Q07889 1333 aaPredicted RBP9.5□□□□□ -0.89
CD47-204ENST00000471694 ALDH3A1P30838 453 aa9.5□□□□□ -0.89
CD47-204ENST00000471694 STAT2P52630 851 aa9.5□□□□□ -0.89
CD47-204ENST00000471694 GOLGA8FQ08AF8 430 aa9.5□□□□□ -0.89
CD47-204ENST00000471694 GOLGA8DPQ0D2H9 430 aa9.5□□□□□ -0.89
CD47-204ENST00000471694 KCTD1Q719H9 257 aa9.5□□□□□ -0.89
CD47-204ENST00000471694 SLFN12Q8IYM2 578 aa9.5□□□□□ -0.89
CD47-204ENST00000471694 CCDC42Q96M95 316 aa9.5□□□□□ -0.89
CD47-204ENST00000471694 CCDC94Q9BW85 323 aaPredicted RBP9.5□□□□□ -0.89
CD47-204ENST00000471694 EIF2AK4Q9P2K8 1649 aaKnown RBP9.5□□□□□ -0.89
CD47-204ENST00000471694 A0A0G2JLW4 131 aa9.49□□□□□ -0.89
CD47-204ENST00000471694 BCRP11274 1271 aa9.49□□□□□ -0.89
CD47-204ENST00000471694 MAN1A1P33908 653 aa9.49□□□□□ -0.89
CD47-204ENST00000471694 CC2D1AQ6P1N0 951 aaPredicted RBP9.49□□□□□ -0.89
CD47-204ENST00000471694 PDZD4Q76G19 769 aaPredicted RBP9.49□□□□□ -0.89
CD47-204ENST00000471694 VPS52Q8N1B4 723 aa9.49□□□□□ -0.89
CD47-204ENST00000471694 hCG_1642624A0A1W2PR95 340 aa9.49□□□□□ -0.89
CD47-204ENST00000471694 KIF2AO00139 706 aaPredicted RBP9.49□□□□□ -0.89
CD47-204ENST00000471694 GOLGA8HP0CJ92 632 aa9.49□□□□□ -0.89
CD47-204ENST00000471694 GSDMDP57764 484 aa9.49□□□□□ -0.89
CD47-204ENST00000471694 CTR9Q6PD62 1173 aa9.49□□□□□ -0.89
CD47-204ENST00000471694 GDAP1Q8TB36 358 aa9.49□□□□□ -0.89
CD47-204ENST00000471694 SDR42E1Q8WUS8 393 aa9.49□□□□□ -0.89
CD47-204ENST00000471694 MAP10Q9P2G4 905 aa9.49□□□□□ -0.89
CD47-204ENST00000471694 TPCN1Q9ULQ1 816 aa9.49□□□□□ -0.89
CD47-204ENST00000471694 KDM3AQ9Y4C1 1321 aa9.49□□□□□ -0.89
CD47-204ENST00000471694 SASH1O94885 1247 aa9.49□□□□□ -0.89
CD47-204ENST00000471694 TTC38Q5R3I4 469 aa9.49□□□□□ -0.89
CD47-204ENST00000471694 ESYT1Q9BSJ8 1104 aa9.49□□□□□ -0.89
CD47-204ENST00000471694 ELP3Q9H9T3 547 aa9.49□□□□□ -0.89
CD47-204ENST00000471694 WDR64B1ANS9 1081 aa9.49□□□□□ -0.89
CD47-204ENST00000471694 PI4K2BQ8TCG2 481 aa9.49□□□□□ -0.89
CD47-204ENST00000471694 ARHGAP45Q92619 1136 aa9.49□□□□□ -0.89
CD47-204ENST00000471694 GPR101Q96P66 508 aaPredicted RBP9.49□□□□□ -0.89
CD47-204ENST00000471694 MMTAG2Q9BU76 263 aaKnown RBP9.49□□□□□ -0.89
CD47-204ENST00000471694 MYL10Q9BUA6 226 aa9.49□□□□□ -0.89
CD47-204ENST00000471694 CCDC68Q9H2F9 335 aa9.49□□□□□ -0.89
CD47-204ENST00000471694 S100BP04271 92 aaPredicted RBP9.49□□□□□ -0.89
CD47-204ENST00000471694 HUNKP57058 714 aa9.49□□□□□ -0.89
CD47-204ENST00000471694 CABP7Q86V35 215 aa9.49□□□□□ -0.89
CD47-204ENST00000471694 POLR3AO14802 1390 aaPredicted RBP9.49□□□□□ -0.89
CD47-204ENST00000471694 MLH3Q9UHC1 1453 aa9.49□□□□□ -0.89
CD47-204ENST00000471694 MYO3BQ8WXR4 1341 aa9.49□□□□□ -0.89
CD47-204ENST00000471694 ADAMTS12P58397 1594 aa9.49□□□□□ -0.89
CD47-204ENST00000471694 NEMP1O14524 444 aa9.48□□□□□ -0.89
CD47-204ENST00000471694 UPP2O95045 317 aa9.48□□□□□ -0.89
CD47-204ENST00000471694 DLATP10515 647 aaKnown RBP9.48□□□□□ -0.89
CD47-204ENST00000471694 TXNRD1Q16881 649 aa9.48□□□□□ -0.89
CD47-204ENST00000471694 TRIM56Q9BRZ2 755 aaKnown RBP9.48□□□□□ -0.89
CD47-204ENST00000471694 ZNF577Q9BSK1 485 aa9.48□□□□□ -0.89
CD47-204ENST00000471694 SLC4A7Q9Y6M7 1214 aa9.48□□□□□ -0.89
CD47-204ENST00000471694 NUP160Q12769 1436 aa9.48□□□□□ -0.89
CD47-204ENST00000471694 FAM170AA1A519 330 aa9.48□□□□□ -0.89
CD47-204ENST00000471694 RNASE9P60153 205 aaKnown RBP9.48□□□□□ -0.89
CD47-204ENST00000471694 PPP2R5AQ15172 486 aa9.48□□□□□ -0.89
CD47-204ENST00000471694 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.48□□□□□ -0.89
CD47-204ENST00000471694 RNF139Q8WU17 664 aa9.48□□□□□ -0.89
CD47-204ENST00000471694 ATP6V0A1Q93050 837 aa9.48□□□□□ -0.89
CD47-204ENST00000471694 SMC6Q96SB8 1091 aa9.48□□□□□ -0.89
CD47-204ENST00000471694 STMN4Q9H169 189 aaPredicted RBP9.48□□□□□ -0.89
CD47-204ENST00000471694 MYO1AQ9UBC5 1043 aa9.48□□□□□ -0.89
CD47-204ENST00000471694 IL6STP40189 918 aaPredicted RBP9.48□□□□□ -0.89
CD47-204ENST00000471694 TBC1D8BQ0IIM8 1120 aa9.48□□□□□ -0.89
CD47-204ENST00000471694 ANKRD44Q8N8A2 993 aa9.48□□□□□ -0.89
CD47-204ENST00000471694 SLC7A3Q8WY07 619 aa9.48□□□□□ -0.89
CD47-204ENST00000471694 DDX25Q9UHL0 483 aaKnown RBP9.48□□□□□ -0.89
CD47-204ENST00000471694 RIPOR2Q9Y4F9 1068 aa9.48□□□□□ -0.89
CD47-204ENST00000471694 WDR46O15213 610 aaKnown RBP9.48□□□□□ -0.89
CD47-204ENST00000471694 PPP1R2P41236 205 aa9.48□□□□□ -0.89
CD47-204ENST00000471694 NUCB1Q02818 461 aa9.48□□□□□ -0.89
CD47-204ENST00000471694 ARHGAP44Q17R89 818 aa9.48□□□□□ -0.89
CD47-204ENST00000471694 VWA3BQ502W6 1294 aa9.48□□□□□ -0.89
CD47-204ENST00000471694 RC3H1Q5TC82 1133 aaKnown RBP9.48□□□□□ -0.89
CD47-204ENST00000471694 FAM117BQ6P1L5 589 aa9.48□□□□□ -0.89
CD47-204ENST00000471694 FBF1Q8TES7 1133 aa9.48□□□□□ -0.89
CD47-204ENST00000471694 CCDC17Q96LX7 622 aa9.48□□□□□ -0.89
CD47-204ENST00000471694 SELENOSQ9BQE4 189 aa9.48□□□□□ -0.89
CD47-204ENST00000471694 ZBTB1Q9Y2K1 713 aa9.48□□□□□ -0.89
CD47-204ENST00000471694 RECQLP46063 649 aaPredicted RBP9.48□□□□□ -0.89
CD47-204ENST00000471694 GRAPQ13588 217 aa9.48□□□□□ -0.89
CD47-204ENST00000471694 PRPSAP1Q14558 356 aa9.48□□□□□ -0.89
CD47-204ENST00000471694 CLUL1Q15846 466 aa9.48□□□□□ -0.89
CD47-204ENST00000471694 KIF18AQ8NI77 898 aa9.48□□□□□ -0.89
CD47-204ENST00000471694 GRAPLQ8TC17 118 aaPredicted RBP9.48□□□□□ -0.89
CD47-204ENST00000471694 CACTINQ8WUQ7 758 aaKnown RBP9.48□□□□□ -0.89
CD47-204ENST00000471694 IPO11Q9UI26 975 aaKnown RBP9.48□□□□□ -0.89
CD47-204ENST00000471694 PCDHB13Q9Y5F0 798 aa9.48□□□□□ -0.89
CD47-204ENST00000471694 LACTBP83111 547 aaPredicted RBP9.48□□□□□ -0.89
CD47-204ENST00000471694 RILPL1Q5EBL4 403 aa9.48□□□□□ -0.89
CD47-204ENST00000471694 HOXC10Q9NYD6 342 aa9.48□□□□□ -0.89
CD47-204ENST00000471694 KRT83P78385 493 aa9.47□□□□□ -0.89
CD47-204ENST00000471694 GPBP1Q86WP2 473 aa9.47□□□□□ -0.89
CD47-204ENST00000471694 PBRM1Q86U86 1689 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms