RNA–Protein interactions for RNA: ENST00000471660.5

CHMP2B-203, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2 BASIC

Gene CHMP2B, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-203ENST00000471660 RPGRIP1Q96KN7 1286 aa12.07□□□□□ -0.48
CHMP2B-203ENST00000471660 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.07□□□□□ -0.48
CHMP2B-203ENST00000471660 CENPHQ9H3R5 247 aa12.07□□□□□ -0.48
CHMP2B-203ENST00000471660 LMCD1Q9NZU5 365 aa12.07□□□□□ -0.48
CHMP2B-203ENST00000471660 CCNL1Q9UK58 526 aaPredicted RBP12.07□□□□□ -0.48
CHMP2B-203ENST00000471660 U3KPZ7 1027 aaPredicted RBP12.07□□□□□ -0.48
CHMP2B-203ENST00000471660 MEGF6O75095 1541 aa12.07□□□□□ -0.48
CHMP2B-203ENST00000471660 CSB-PGBD3P0DP91 1061 aa12.06□□□□□ -0.48
CHMP2B-203ENST00000471660 GCLCP48506 637 aaPredicted RBP12.06□□□□□ -0.48
CHMP2B-203ENST00000471660 TGFB2P61812 414 aa12.06□□□□□ -0.48
CHMP2B-203ENST00000471660 SPATA21Q7Z572 469 aa12.06□□□□□ -0.48
CHMP2B-203ENST00000471660 TRIM58Q8NG06 486 aa12.06□□□□□ -0.48
CHMP2B-203ENST00000471660 RASSF8Q8NHQ8 419 aa12.06□□□□□ -0.48
CHMP2B-203ENST00000471660 ZFAND2BQ8WV99 257 aa12.06□□□□□ -0.48
CHMP2B-203ENST00000471660 EZH1Q92800 747 aaPredicted RBP12.06□□□□□ -0.48
CHMP2B-203ENST00000471660 SPAG5Q96R06 1193 aa12.06□□□□□ -0.48
CHMP2B-203ENST00000471660 INTS13Q9NVM9 706 aa12.06□□□□□ -0.48
CHMP2B-203ENST00000471660 NLRP2Q9NX02 1062 aa12.06□□□□□ -0.48
CHMP2B-203ENST00000471660 PCDHGC5Q9Y5F6 944 aa12.06□□□□□ -0.48
CHMP2B-203ENST00000471660 C4BP0C0L5 1744 aa12.06□□□□□ -0.48
CHMP2B-203ENST00000471660 PI4KAP2A4QPH2 592 aa12.06□□□□□ -0.48
CHMP2B-203ENST00000471660 TMEM232C9JQI7 657 aa12.06□□□□□ -0.48
CHMP2B-203ENST00000471660 HIP1O00291 1037 aa12.06□□□□□ -0.48
CHMP2B-203ENST00000471660 SLC3A2P08195 630 aaKnown RBP12.06□□□□□ -0.48
CHMP2B-203ENST00000471660 CD151P48509 253 aa12.06□□□□□ -0.48
CHMP2B-203ENST00000471660 LBX1P52954 281 aa12.06□□□□□ -0.48
CHMP2B-203ENST00000471660 ROR2Q01974 943 aaKnown RBP12.06□□□□□ -0.48
CHMP2B-203ENST00000471660 GOLGA8FQ08AF8 430 aa12.06□□□□□ -0.48
CHMP2B-203ENST00000471660 GOLGA8DPQ0D2H9 430 aa12.06□□□□□ -0.48
CHMP2B-203ENST00000471660 PRPF38BQ5VTL8 546 aaKnown RBP12.06□□□□□ -0.48
CHMP2B-203ENST00000471660 SPECC1LQ69YQ0 1117 aa12.06□□□□□ -0.48
CHMP2B-203ENST00000471660 SDCCAG8Q86SQ7 713 aaPredicted RBP12.06□□□□□ -0.48
CHMP2B-203ENST00000471660 KIRREL3Q8IZU9 778 aa12.06□□□□□ -0.48
CHMP2B-203ENST00000471660 PI4KAP1Q8N8J0 262 aa12.06□□□□□ -0.48
CHMP2B-203ENST00000471660 CCDC114Q96M63 670 aa12.06□□□□□ -0.48
CHMP2B-203ENST00000471660 SELENOOQ9BVL4 669 aa12.06□□□□□ -0.48
CHMP2B-203ENST00000471660 RGL1Q9NZL6 768 aa12.06□□□□□ -0.48
CHMP2B-203ENST00000471660 ENO4A6NNW6 628 aa12.05□□□□□ -0.48
CHMP2B-203ENST00000471660 H3BQV1 296 aa12.05□□□□□ -0.48
CHMP2B-203ENST00000471660 FERP16591 822 aa12.05□□□□□ -0.48
CHMP2B-203ENST00000471660 PTH1RQ03431 593 aa12.05□□□□□ -0.48
CHMP2B-203ENST00000471660 TOB2Q14106 344 aaPredicted RBP12.05□□□□□ -0.48
CHMP2B-203ENST00000471660 MYSM1Q5VVJ2 828 aa12.05□□□□□ -0.48
CHMP2B-203ENST00000471660 RASGRP2Q7LDG7 609 aa12.05□□□□□ -0.48
CHMP2B-203ENST00000471660 ZNF473Q8WTR7 871 aaKnown RBP12.05□□□□□ -0.48
CHMP2B-203ENST00000471660 FANCLQ9NW38 375 aa12.05□□□□□ -0.48
CHMP2B-203ENST00000471660 WBP1LQ9NX94 342 aa12.05□□□□□ -0.48
CHMP2B-203ENST00000471660 RPS6KB1P23443 525 aa12.05□□□□□ -0.48
CHMP2B-203ENST00000471660 ABCD1P33897 745 aa12.05□□□□□ -0.48
CHMP2B-203ENST00000471660 G3BP1Q13283 466 aaKnown RBP eCLIP12.05□□□□□ -0.48
CHMP2B-203ENST00000471660 MKRN4PQ13434 485 aaPredicted RBP12.05□□□□□ -0.48
CHMP2B-203ENST00000471660 LAMB3Q13751 1172 aa12.05□□□□□ -0.48
CHMP2B-203ENST00000471660 ZNF569Q5MCW4 686 aa12.05□□□□□ -0.48
CHMP2B-203ENST00000471660 CCDC170Q8IYT3 715 aa12.05□□□□□ -0.48
CHMP2B-203ENST00000471660 TTC5Q8N0Z6 440 aa12.05□□□□□ -0.48
CHMP2B-203ENST00000471660 P3H4Q92791 437 aa12.05□□□□□ -0.48
CHMP2B-203ENST00000471660 ALS2CR12Q96Q35 445 aa12.05□□□□□ -0.48
CHMP2B-203ENST00000471660 USP28Q96RU2 1077 aa12.05□□□□□ -0.48
CHMP2B-203ENST00000471660 DESI2Q9BSY9 194 aa12.05□□□□□ -0.48
CHMP2B-203ENST00000471660 TUBE1Q9UJT0 475 aa12.05□□□□□ -0.48
CHMP2B-203ENST00000471660 PDLIM1O00151 329 aa12.04□□□□□ -0.48
CHMP2B-203ENST00000471660 PPP1R12BO60237 982 aaPredicted RBP12.04□□□□□ -0.48
CHMP2B-203ENST00000471660 PYGLP06737 847 aa12.04□□□□□ -0.48
CHMP2B-203ENST00000471660 E2F5Q15329 346 aa12.04□□□□□ -0.48
CHMP2B-203ENST00000471660 LACTB2Q53H82 288 aaPredicted RBP12.04□□□□□ -0.48
CHMP2B-203ENST00000471660 CREB3L3Q68CJ9 461 aa12.04□□□□□ -0.48
CHMP2B-203ENST00000471660 KDM7AQ6ZMT4 941 aa12.04□□□□□ -0.48
CHMP2B-203ENST00000471660 PPP1R42Q7Z4L9 355 aa12.04□□□□□ -0.48
CHMP2B-203ENST00000471660 APLFQ8IW19 511 aaPredicted RBP12.04□□□□□ -0.48
CHMP2B-203ENST00000471660 CCHCR1Q8TD31 782 aa12.04□□□□□ -0.48
CHMP2B-203ENST00000471660 AENQ8WTP8 325 aaKnown RBP12.04□□□□□ -0.48
CHMP2B-203ENST00000471660 SCLT1Q96NL6 688 aa12.04□□□□□ -0.48
CHMP2B-203ENST00000471660 PHAXQ9H814 394 aaKnown RBP12.04□□□□□ -0.48
CHMP2B-203ENST00000471660 SNRKQ9NRH2 765 aa12.04□□□□□ -0.48
CHMP2B-203ENST00000471660 TTF2Q9UNY4 1162 aaKnown RBP12.04□□□□□ -0.48
CHMP2B-203ENST00000471660 TIAM2Q8IVF5 1701 aa12.04□□□□□ -0.48
CHMP2B-203ENST00000471660 RFX7Q2KHR2 1363 aa12.04□□□□□ -0.48
CHMP2B-203ENST00000471660 GLRX3O76003 335 aaKnown RBP12.04□□□□□ -0.48
CHMP2B-203ENST00000471660 RPSAP08865 295 aaKnown RBP12.04□□□□□ -0.48
CHMP2B-203ENST00000471660 IL2RBP14784 551 aa12.04□□□□□ -0.48
CHMP2B-203ENST00000471660 EIF2S2P20042 333 aaKnown RBP12.04□□□□□ -0.48
CHMP2B-203ENST00000471660 LSP1P33241 339 aa12.04□□□□□ -0.48
CHMP2B-203ENST00000471660 ME1P48163 572 aa12.04□□□□□ -0.48
CHMP2B-203ENST00000471660 PAPOLAP51003 745 aaKnown RBP12.04□□□□□ -0.48
CHMP2B-203ENST00000471660 RNF187Q5TA31 235 aaPredicted RBP12.04□□□□□ -0.48
CHMP2B-203ENST00000471660 THEMIS2Q5TEJ8 643 aa12.04□□□□□ -0.48
CHMP2B-203ENST00000471660 CCNI2Q6ZMN8 369 aaPredicted RBP12.04□□□□□ -0.48
CHMP2B-203ENST00000471660 SLC35F6Q8N357 371 aa12.04□□□□□ -0.48
CHMP2B-203ENST00000471660 RHPN1Q8TCX5 695 aa12.04□□□□□ -0.48
CHMP2B-203ENST00000471660 FBXW7Q969H0 707 aa12.04□□□□□ -0.48
CHMP2B-203ENST00000471660 PLEKHG4BQ96PX9 1271 aa12.04□□□□□ -0.48
CHMP2B-203ENST00000471660 LLPHQ9BRT6 129 aaKnown RBP12.04□□□□□ -0.48
CHMP2B-203ENST00000471660 FAM184BQ9ULE4 1060 aa12.04□□□□□ -0.48
CHMP2B-203ENST00000471660 C15orf41Q9Y2V0 281 aa12.04□□□□□ -0.48
CHMP2B-203ENST00000471660 SPDYE3A6NKU9 549 aa12.03□□□□□ -0.48
CHMP2B-203ENST00000471660 GRM8O00222 908 aa12.03□□□□□ -0.48
CHMP2B-203ENST00000471660 ZSCAN9O15535 394 aaPredicted RBP12.03□□□□□ -0.48
CHMP2B-203ENST00000471660 RIPK1Q13546 671 aa12.03□□□□□ -0.48
CHMP2B-203ENST00000471660 HHATQ5VTY9 493 aa12.03□□□□□ -0.48
CHMP2B-203ENST00000471660 ALS2CLQ60I27 953 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms