RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 ABCB5Q2M3G0 1257 aa11.09□□□□□ -0.63
CPSF4-211ENST00000471455 PADI6Q6TGC4 694 aa11.09□□□□□ -0.63
CPSF4-211ENST00000471455 ADGRA1Q86SQ6 560 aa11.09□□□□□ -0.63
CPSF4-211ENST00000471455 EDC3Q96F86 508 aaKnown RBP11.09□□□□□ -0.63
CPSF4-211ENST00000471455 KIAA1683Q9H0B3 1180 aa11.09□□□□□ -0.63
CPSF4-211ENST00000471455 PORCNQ9H237 461 aa11.09□□□□□ -0.63
CPSF4-211ENST00000471455 PRKAG2Q9UGJ0 569 aa11.09□□□□□ -0.63
CPSF4-211ENST00000471455 VCAM1P19320 739 aa11.08□□□□□ -0.64
CPSF4-211ENST00000471455 CCND3P30281 292 aaPredicted RBP11.08□□□□□ -0.64
CPSF4-211ENST00000471455 ATP2B2Q01814 1243 aa11.08□□□□□ -0.64
CPSF4-211ENST00000471455 ZYXQ15942 572 aaKnown RBP11.08□□□□□ -0.64
CPSF4-211ENST00000471455 CERKLQ49MI3 558 aaPredicted RBP11.08□□□□□ -0.64
CPSF4-211ENST00000471455 TATDN1Q6P1N9 297 aa11.08□□□□□ -0.64
CPSF4-211ENST00000471455 LBX2Q6XYB7 198 aa11.08□□□□□ -0.64
CPSF4-211ENST00000471455 ERC1Q8IUD2 1116 aa11.08□□□□□ -0.64
CPSF4-211ENST00000471455 TMEM57Q8N5G2 664 aa11.08□□□□□ -0.64
CPSF4-211ENST00000471455 PIH1D3Q9NQM4 214 aaKnown RBP11.08□□□□□ -0.64
CPSF4-211ENST00000471455 DDX20Q9UHI6 824 aaKnown RBP11.08□□□□□ -0.64
CPSF4-211ENST00000471455 DBNLQ9UJU6 430 aaKnown RBP11.08□□□□□ -0.64
CPSF4-211ENST00000471455 NOP58Q9Y2X3 529 aaKnown RBP11.08□□□□□ -0.64
CPSF4-211ENST00000471455 MYH1P12882 1939 aa11.07□□□□□ -0.64
CPSF4-211ENST00000471455 DNM1LO00429 736 aa11.07□□□□□ -0.64
CPSF4-211ENST00000471455 BCAR3O75815 825 aa11.07□□□□□ -0.64
CPSF4-211ENST00000471455 HOXC6P09630 235 aa11.07□□□□□ -0.64
CPSF4-211ENST00000471455 DYNLL1P63167 89 aaKnown RBP11.07□□□□□ -0.64
CPSF4-211ENST00000471455 JAG1P78504 1218 aa11.07□□□□□ -0.64
CPSF4-211ENST00000471455 TTF1Q15361 905 aaPredicted RBP11.07□□□□□ -0.64
CPSF4-211ENST00000471455 CCL14Q16627 93 aa11.07□□□□□ -0.64
CPSF4-211ENST00000471455 Q3C1V9 767 aa11.07□□□□□ -0.64
CPSF4-211ENST00000471455 THSD4Q6ZMP0 1018 aa11.07□□□□□ -0.64
CPSF4-211ENST00000471455 CATSPERGQ6ZRH7 1159 aa11.07□□□□□ -0.64
CPSF4-211ENST00000471455 LAPTM4BQ86VI4 370 aa11.07□□□□□ -0.64
CPSF4-211ENST00000471455 MAGEB6Q8N7X4 407 aa11.07□□□□□ -0.64
CPSF4-211ENST00000471455 MIGA1Q8NAN2 632 aa11.07□□□□□ -0.64
CPSF4-211ENST00000471455 LPAR1Q92633 364 aa11.07□□□□□ -0.64
CPSF4-211ENST00000471455 SLC5A4Q9NY91 659 aa11.07□□□□□ -0.64
CPSF4-211ENST00000471455 LAMA3Q16787 3333 aa11.06□□□□□ -0.64
CPSF4-211ENST00000471455 SMAPO00193 183 aa11.06□□□□□ -0.64
CPSF4-211ENST00000471455 PEX10O60683 326 aa11.06□□□□□ -0.64
CPSF4-211ENST00000471455 POLR3DP05423 398 aaPredicted RBP11.06□□□□□ -0.64
CPSF4-211ENST00000471455 CNGA1P29973 690 aa11.06□□□□□ -0.64
CPSF4-211ENST00000471455 GRB14Q14449 540 aa11.06□□□□□ -0.64
CPSF4-211ENST00000471455 LRRC26Q2I0M4 334 aa11.06□□□□□ -0.64
CPSF4-211ENST00000471455 SHROOM1Q2M3G4 852 aaPredicted RBP11.06□□□□□ -0.64
CPSF4-211ENST00000471455 HSP90AB4PQ58FF6 505 aa11.06□□□□□ -0.64
CPSF4-211ENST00000471455 ITPRIPQ8IWB1 547 aa11.06□□□□□ -0.64
CPSF4-211ENST00000471455 ARRDC4Q8NCT1 418 aa11.06□□□□□ -0.64
CPSF4-211ENST00000471455 CRNKL1Q9BZJ0 848 aaKnown RBP11.06□□□□□ -0.64
CPSF4-211ENST00000471455 SENP6Q9GZR1 1112 aaPredicted RBP11.06□□□□□ -0.64
CPSF4-211ENST00000471455 RPAP3Q9H6T3 665 aaPredicted RBP11.06□□□□□ -0.64
CPSF4-211ENST00000471455 MTMR10Q9NXD2 777 aa11.06□□□□□ -0.64
CPSF4-211ENST00000471455 KBTBD13C9JR72 458 aa11.05□□□□□ -0.64
CPSF4-211ENST00000471455 STRNO43815 780 aa11.05□□□□□ -0.64
CPSF4-211ENST00000471455 CNMDO75829 334 aa11.05□□□□□ -0.64
CPSF4-211ENST00000471455 MDM2Q00987 491 aaPredicted RBP11.05□□□□□ -0.64
CPSF4-211ENST00000471455 FAM109BQ6ICB4 259 aaPredicted RBP11.05□□□□□ -0.64
CPSF4-211ENST00000471455 Q7L0L9 218 aa11.05□□□□□ -0.64
CPSF4-211ENST00000471455 DPP9Q86TI2 863 aa11.05□□□□□ -0.64
CPSF4-211ENST00000471455 MB21D1Q8N884 522 aa11.05□□□□□ -0.64
CPSF4-211ENST00000471455 WNT2BQ93097 391 aa11.05□□□□□ -0.64
CPSF4-211ENST00000471455 CCDC8Q9H0W5 538 aaPredicted RBP11.05□□□□□ -0.64
CPSF4-211ENST00000471455 SH2D4AQ9H788 454 aa11.05□□□□□ -0.64
CPSF4-211ENST00000471455 HOXC10Q9NYD6 342 aa11.05□□□□□ -0.64
CPSF4-211ENST00000471455 FRMPD3Q5JV73 1810 aa11.05□□□□□ -0.64
CPSF4-211ENST00000471455 ZNF236Q9UL36 1845 aa11.05□□□□□ -0.64
CPSF4-211ENST00000471455 MAGEB6P1A0A0J9YX57 407 aa11.04□□□□□ -0.64
CPSF4-211ENST00000471455 MPHOSPH10O00566 681 aaKnown RBP11.04□□□□□ -0.64
CPSF4-211ENST00000471455 COG2Q14746 738 aa11.04□□□□□ -0.64
CPSF4-211ENST00000471455 OLFML2BQ68BL8 750 aa11.04□□□□□ -0.64
CPSF4-211ENST00000471455 AACSQ86V21 672 aa11.04□□□□□ -0.64
CPSF4-211ENST00000471455 SHCBP1Q8NEM2 672 aa11.04□□□□□ -0.64
CPSF4-211ENST00000471455 EAF2Q96CJ1 260 aaPredicted RBP11.04□□□□□ -0.64
CPSF4-211ENST00000471455 ZFRQ96KR1 1074 aaKnown RBP11.04□□□□□ -0.64
CPSF4-211ENST00000471455 TANGO6Q9C0B7 1094 aa11.04□□□□□ -0.64
CPSF4-211ENST00000471455 C1orf115Q9H7X2 142 aa11.04□□□□□ -0.64
CPSF4-211ENST00000471455 TLR7Q9NYK1 1049 aaKnown RBP11.04□□□□□ -0.64
CPSF4-211ENST00000471455 SWAP70Q9UH65 585 aa11.04□□□□□ -0.64
CPSF4-211ENST00000471455 TNNQ9UQP3 1299 aa11.04□□□□□ -0.64
CPSF4-211ENST00000471455 NDUFB9Q9Y6M9 179 aa11.04□□□□□ -0.64
CPSF4-211ENST00000471455 NAV1Q8NEY1 1877 aa11.04□□□□□ -0.64
CPSF4-211ENST00000471455 MYO5AQ9Y4I1 1855 aaKnown RBP11.04□□□□□ -0.64
CPSF4-211ENST00000471455 CYBAP13498 195 aa11.03□□□□□ -0.64
CPSF4-211ENST00000471455 SHMT1P34896 483 aa11.03□□□□□ -0.64
CPSF4-211ENST00000471455 ZNF697Q5TEC3 545 aa11.03□□□□□ -0.64
CPSF4-211ENST00000471455 TMEM179Q6ZVK1 233 aa11.03□□□□□ -0.64
CPSF4-211ENST00000471455 PACS2Q86VP3 889 aa11.03□□□□□ -0.64
CPSF4-211ENST00000471455 AMOTL1Q8IY63 956 aa11.03□□□□□ -0.64
CPSF4-211ENST00000471455 ACER1Q8TDN7 264 aa11.03□□□□□ -0.64
CPSF4-211ENST00000471455 MROH8Q9H579 483 aa11.03□□□□□ -0.64
CPSF4-211ENST00000471455 ARHGEF10LQ9HCE6 1279 aa11.03□□□□□ -0.64
CPSF4-211ENST00000471455 MCM9Q9NXL9 1143 aa11.03□□□□□ -0.64
CPSF4-211ENST00000471455 BTBD7Q9P203 1132 aa11.03□□□□□ -0.64
CPSF4-211ENST00000471455 ADORA2AP29274 412 aa11.02□□□□□ -0.65
CPSF4-211ENST00000471455 CYP2C19P33261 490 aa11.02□□□□□ -0.65
CPSF4-211ENST00000471455 RTP1P59025 263 aa11.02□□□□□ -0.65
CPSF4-211ENST00000471455 SEPT2Q15019 361 aa11.02□□□□□ -0.65
CPSF4-211ENST00000471455 SLC9C2Q5TAH2 1124 aa11.02□□□□□ -0.65
CPSF4-211ENST00000471455 ABRAQ8N0Z2 381 aa11.02□□□□□ -0.65
CPSF4-211ENST00000471455 TATDN2Q93075 761 aa11.02□□□□□ -0.65
CPSF4-211ENST00000471455 DDRGK1Q96HY6 314 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms