RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 RNF111Q6ZNA4 994 aa5.51□□□□□ -1.53
COPS3-206ENST00000471414 TMC3Q7Z5M5 1100 aa5.51□□□□□ -1.53
COPS3-206ENST00000471414 LILRA2Q8N149 483 aa5.51□□□□□ -1.53
COPS3-206ENST00000471414 ZNF655Q8N720 491 aaPredicted RBP5.51□□□□□ -1.53
COPS3-206ENST00000471414 SHISA4Q96DD7 197 aa5.51□□□□□ -1.53
COPS3-206ENST00000471414 SLC9A7Q96T83 725 aa5.51□□□□□ -1.53
COPS3-206ENST00000471414 PCDHGB7Q9Y5F8 929 aa5.51□□□□□ -1.53
COPS3-206ENST00000471414 SCAMP3O14828 347 aaKnown RBP5.5□□□□□ -1.53
COPS3-206ENST00000471414 SIGLEC6O43699 453 aa5.5□□□□□ -1.53
COPS3-206ENST00000471414 TSPAN15O95858 294 aa5.5□□□□□ -1.53
COPS3-206ENST00000471414 EFEMP2O95967 443 aa5.5□□□□□ -1.53
COPS3-206ENST00000471414 IMPDH2P12268 514 aa5.5□□□□□ -1.53
COPS3-206ENST00000471414 TRHRP34981 398 aaPredicted RBP5.5□□□□□ -1.53
COPS3-206ENST00000471414 FZD5Q13467 585 aa5.5□□□□□ -1.53
COPS3-206ENST00000471414 ZNF124Q15973 351 aa5.5□□□□□ -1.53
COPS3-206ENST00000471414 BBS9Q3SYG4 887 aa5.5□□□□□ -1.53
COPS3-206ENST00000471414 LINC00116Q8NCU8 138 aa5.5□□□□□ -1.53
COPS3-206ENST00000471414 RNF34Q969K3 372 aa5.5□□□□□ -1.53
COPS3-206ENST00000471414 TCTN2Q96GX1 697 aa5.5□□□□□ -1.53
COPS3-206ENST00000471414 SLC6A18Q96N87 628 aa5.5□□□□□ -1.53
COPS3-206ENST00000471414 PRDM14Q9GZV8 571 aa5.5□□□□□ -1.53
COPS3-206ENST00000471414 RNF32Q9H0A6 362 aa5.5□□□□□ -1.53
COPS3-206ENST00000471414 PRR13Q9NZ81 148 aa5.5□□□□□ -1.53
COPS3-206ENST00000471414 DBX1A6NMT0 343 aa5.49□□□□□ -1.53
COPS3-206ENST00000471414 SHOXO15266 292 aa5.49□□□□□ -1.53
COPS3-206ENST00000471414 CLEC3AO75596 197 aa5.49□□□□□ -1.53
COPS3-206ENST00000471414 PRAMEF1O95521 474 aa5.49□□□□□ -1.53
COPS3-206ENST00000471414 CEBPAP49715 358 aaPredicted RBP5.49□□□□□ -1.53
COPS3-206ENST00000471414 ANKS4BQ8N8V4 417 aa5.49□□□□□ -1.53
COPS3-206ENST00000471414 DHX38Q92620 1227 aaKnown RBP5.49□□□□□ -1.53
COPS3-206ENST00000471414 C19orf44Q9H6X5 657 aa5.49□□□□□ -1.53
COPS3-206ENST00000471414 SUCOQ9UBS9 1254 aaKnown RBP5.49□□□□□ -1.53
COPS3-206ENST00000471414 CTSKP43235 329 aa5.48□□□□□ -1.53
COPS3-206ENST00000471414 CHRNEQ04844 493 aa5.48□□□□□ -1.53
COPS3-206ENST00000471414 DUSP4Q13115 394 aa5.48□□□□□ -1.53
COPS3-206ENST00000471414 CLEC16AQ2KHT3 1053 aa5.48□□□□□ -1.53
COPS3-206ENST00000471414 MPZL3Q6UWV2 235 aa5.48□□□□□ -1.53
COPS3-206ENST00000471414 KSR1Q8IVT5 923 aa5.48□□□□□ -1.53
COPS3-206ENST00000471414 OXR1Q8N573 874 aa5.48□□□□□ -1.53
COPS3-206ENST00000471414 RASGRP4Q8TDF6 673 aa5.48□□□□□ -1.53
COPS3-206ENST00000471414 ZNF512BQ96KM6 892 aaPredicted RBP5.48□□□□□ -1.53
COPS3-206ENST00000471414 TM9SF2Q99805 663 aa5.48□□□□□ -1.53
COPS3-206ENST00000471414 CWC22Q9HCG8 908 aaKnown RBP5.48□□□□□ -1.53
COPS3-206ENST00000471414 KIAA1522Q9P206 1035 aaPredicted RBP5.48□□□□□ -1.53
COPS3-206ENST00000471414 C9IYK1 514 aa5.47□□□□□ -1.53
COPS3-206ENST00000471414 MED14OSP0DP75 135 aa5.47□□□□□ -1.53
COPS3-206ENST00000471414 SOX9P48436 509 aa5.47□□□□□ -1.53
COPS3-206ENST00000471414 PMS1P54277 932 aaKnown RBP5.47□□□□□ -1.53
COPS3-206ENST00000471414 TRIM26Q12899 539 aaPredicted RBP5.47□□□□□ -1.53
COPS3-206ENST00000471414 AUHQ13825 339 aaKnown RBP5.47□□□□□ -1.53
COPS3-206ENST00000471414 COL9A2Q14055 689 aaPredicted RBP5.47□□□□□ -1.53
COPS3-206ENST00000471414 SNX17Q15036 470 aa5.47□□□□□ -1.53
COPS3-206ENST00000471414 IRF2BP1Q8IU81 584 aa5.47□□□□□ -1.53
COPS3-206ENST00000471414 FBXO15Q8NCQ5 510 aaPredicted RBP5.47□□□□□ -1.53
COPS3-206ENST00000471414 MAP6Q96JE9 813 aa5.47□□□□□ -1.53
COPS3-206ENST00000471414 PPP1R16BQ96T49 567 aa5.47□□□□□ -1.53
COPS3-206ENST00000471414 SLC38A3Q99624 504 aa5.47□□□□□ -1.53
COPS3-206ENST00000471414 FOXP3Q9BZS1 431 aa5.47□□□□□ -1.53
COPS3-206ENST00000471414 ASCC2Q9H1I8 757 aaPredicted RBP5.47□□□□□ -1.53
COPS3-206ENST00000471414 NSUN3Q9H649 340 aaKnown RBP5.47□□□□□ -1.53
COPS3-206ENST00000471414 TCFL5Q9UL49 500 aa5.47□□□□□ -1.53
COPS3-206ENST00000471414 YBX2Q9Y2T7 364 aaKnown RBP5.47□□□□□ -1.53
COPS3-206ENST00000471414 UNCXA6NJT0 531 aa5.46□□□□□ -1.54
COPS3-206ENST00000471414 ZNF205O95201 554 aa5.46□□□□□ -1.54
COPS3-206ENST00000471414 BMP8BP34820 402 aa5.46□□□□□ -1.54
COPS3-206ENST00000471414 KIR2DL1P43626 348 aaPredicted RBP5.46□□□□□ -1.54
COPS3-206ENST00000471414 KIR2DL2P43627 348 aaPredicted RBP5.46□□□□□ -1.54
COPS3-206ENST00000471414 PCBP3P57721 371 aaKnown RBP5.46□□□□□ -1.54
COPS3-206ENST00000471414 HDLBPQ00341 1268 aaKnown RBP5.46□□□□□ -1.54
COPS3-206ENST00000471414 ANKRD39Q53RE8 183 aa5.46□□□□□ -1.54
COPS3-206ENST00000471414 NLRX1Q86UT6 975 aa5.46□□□□□ -1.54
COPS3-206ENST00000471414 PPFIBP1Q86W92 1011 aa5.46□□□□□ -1.54
COPS3-206ENST00000471414 LSRQ86X29 649 aaPredicted RBP5.46□□□□□ -1.54
COPS3-206ENST00000471414 C1QL4Q86Z23 238 aa5.46□□□□□ -1.54
COPS3-206ENST00000471414 SPPL2CQ8IUH8 684 aa5.46□□□□□ -1.54
COPS3-206ENST00000471414 ZNF654Q8IZM8 581 aa5.46□□□□□ -1.54
COPS3-206ENST00000471414 RGS22Q8NE09 1264 aa5.46□□□□□ -1.54
COPS3-206ENST00000471414 HHIPL1Q96JK4 782 aa5.46□□□□□ -1.54
COPS3-206ENST00000471414 EPB41L4BQ9H329 900 aa5.46□□□□□ -1.54
COPS3-206ENST00000471414 CD320Q9NPF0 282 aa5.46□□□□□ -1.54
COPS3-206ENST00000471414 CHST7Q9NS84 486 aa5.46□□□□□ -1.54
COPS3-206ENST00000471414 PPT2Q9UMR5 302 aa5.46□□□□□ -1.54
COPS3-206ENST00000471414 MINPP1Q9UNW1 487 aa5.46□□□□□ -1.54
COPS3-206ENST00000471414 NRDCO43847 1150 aa5.45□□□□□ -1.54
COPS3-206ENST00000471414 PSPNO60542 156 aa5.45□□□□□ -1.54
COPS3-206ENST00000471414 GUCY2CP25092 1073 aa5.45□□□□□ -1.54
COPS3-206ENST00000471414 GJA8P48165 433 aa5.45□□□□□ -1.54
COPS3-206ENST00000471414 CHMP4BP1P59074 171 aa5.45□□□□□ -1.54
COPS3-206ENST00000471414 PAK2Q13177 524 aa5.45□□□□□ -1.54
COPS3-206ENST00000471414 ZYXQ15942 572 aaKnown RBP5.45□□□□□ -1.54
COPS3-206ENST00000471414 SPOCD1Q6ZMY3 1216 aa5.45□□□□□ -1.54
COPS3-206ENST00000471414 SYDE1Q6ZW31 735 aaPredicted RBP5.45□□□□□ -1.54
COPS3-206ENST00000471414 MRRFQ96E11 262 aaKnown RBP5.45□□□□□ -1.54
COPS3-206ENST00000471414 INTS4Q96HW7 963 aaKnown RBP5.45□□□□□ -1.54
COPS3-206ENST00000471414 DHRS1Q96LJ7 313 aa5.45□□□□□ -1.54
COPS3-206ENST00000471414 SPATA32Q96LK8 384 aa5.45□□□□□ -1.54
COPS3-206ENST00000471414 DIRC2Q96SL1 478 aa5.45□□□□□ -1.54
COPS3-206ENST00000471414 SLC6A17Q9H1V8 727 aa5.45□□□□□ -1.54
COPS3-206ENST00000471414 KCNK12Q9HB15 430 aa5.45□□□□□ -1.54
COPS3-206ENST00000471414 PCDHB12Q9Y5F1 795 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms