RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 SLC1A4P43007 532 aa13.53□□□□□ -0.24
FN1-217ENST00000471193 HMGCS2P54868 508 aa13.53□□□□□ -0.24
FN1-217ENST00000471193 DGKZQ13574 1117 aa13.53□□□□□ -0.24
FN1-217ENST00000471193 NTRK3Q16288 839 aa13.53□□□□□ -0.24
FN1-217ENST00000471193 CCDC96Q2M329 555 aa13.53□□□□□ -0.24
FN1-217ENST00000471193 GPATCH4Q5T3I0 446 aaKnown RBP13.53□□□□□ -0.24
FN1-217ENST00000471193 USP17L2Q6R6M4 530 aa13.53□□□□□ -0.24
FN1-217ENST00000471193 SPICE1Q8N0Z3 855 aa13.53□□□□□ -0.24
FN1-217ENST00000471193 STAG2Q8N3U4 1231 aa13.53□□□□□ -0.24
FN1-217ENST00000471193 NSUN7Q8NE18 718 aaKnown RBP13.53□□□□□ -0.24
FN1-217ENST00000471193 CHMP4CQ96CF2 233 aa13.53□□□□□ -0.24
FN1-217ENST00000471193 SLC10A4Q96EP9 437 aa13.53□□□□□ -0.24
FN1-217ENST00000471193 INTS4Q96HW7 963 aaKnown RBP13.53□□□□□ -0.24
FN1-217ENST00000471193 WNK4Q96J92 1243 aa13.53□□□□□ -0.24
FN1-217ENST00000471193 EMILIN3Q9NT22 766 aa13.53□□□□□ -0.24
FN1-217ENST00000471193 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.53□□□□□ -0.24
FN1-217ENST00000471193 FRMPD2Q68DX3 1309 aaPredicted RBP13.53□□□□□ -0.24
FN1-217ENST00000471193 CNTNAP5Q8WYK1 1306 aa13.53□□□□□ -0.24
FN1-217ENST00000471193 A0A0G2JLL6 359 aaPredicted RBP13.52□□□□□ -0.25
FN1-217ENST00000471193 TMEM88BA6NKF7 163 aa13.52□□□□□ -0.25
FN1-217ENST00000471193 CXCL11O14625 94 aa13.52□□□□□ -0.25
FN1-217ENST00000471193 DHX16O60231 1041 aaKnown RBP13.52□□□□□ -0.25
FN1-217ENST00000471193 GOLGA8HP0CJ92 632 aa13.52□□□□□ -0.25
FN1-217ENST00000471193 BMP3P12645 472 aa13.52□□□□□ -0.25
FN1-217ENST00000471193 IFNAR1P17181 557 aa13.52□□□□□ -0.25
FN1-217ENST00000471193 VCAM1P19320 739 aa13.52□□□□□ -0.25
FN1-217ENST00000471193 GNAQP50148 359 aa13.52□□□□□ -0.25
FN1-217ENST00000471193 FUT2Q10981 343 aa13.52□□□□□ -0.25
FN1-217ENST00000471193 KCTD1Q719H9 257 aa13.52□□□□□ -0.25
FN1-217ENST00000471193 PRRT2Q7Z6L0 340 aaPredicted RBP13.52□□□□□ -0.25
FN1-217ENST00000471193 RASAL3Q86YV0 1011 aa13.52□□□□□ -0.25
FN1-217ENST00000471193 IPO9Q96P70 1041 aaKnown RBP13.52□□□□□ -0.25
FN1-217ENST00000471193 NUP88Q99567 741 aaPredicted RBP13.52□□□□□ -0.25
FN1-217ENST00000471193 LLPHQ9BRT6 129 aaKnown RBP13.52□□□□□ -0.25
FN1-217ENST00000471193 STK36Q9NRP7 1315 aa13.51□□□□□ -0.25
FN1-217ENST00000471193 PTPDC1A2A3K4 754 aa13.51□□□□□ -0.25
FN1-217ENST00000471193 KLRF2D3W0D1 207 aa13.51□□□□□ -0.25
FN1-217ENST00000471193 CPLX1O14810 134 aa13.51□□□□□ -0.25
FN1-217ENST00000471193 CDKL5O76039 1030 aa13.51□□□□□ -0.25
FN1-217ENST00000471193 ZBTB48P10074 688 aaPredicted RBP13.51□□□□□ -0.25
FN1-217ENST00000471193 SLC35G1Q2M3R5 365 aa13.51□□□□□ -0.25
FN1-217ENST00000471193 FAM83BQ5T0W9 1011 aa13.51□□□□□ -0.25
FN1-217ENST00000471193 CPLX2Q6PUV4 134 aaKnown RBP13.51□□□□□ -0.25
FN1-217ENST00000471193 SRBD1Q8N5C6 995 aaKnown RBP13.51□□□□□ -0.25
FN1-217ENST00000471193 PROCA1Q8NCQ7 364 aaPredicted RBP13.51□□□□□ -0.25
FN1-217ENST00000471193 SMARCC2Q8TAQ2 1214 aa13.51□□□□□ -0.25
FN1-217ENST00000471193 HHIPL1Q96JK4 782 aa13.51□□□□□ -0.25
FN1-217ENST00000471193 LZTS2Q9BRK4 669 aa13.51□□□□□ -0.25
FN1-217ENST00000471193 SPZ1Q9BXG8 430 aa13.51□□□□□ -0.25
FN1-217ENST00000471193 TMOD4Q9NZQ9 345 aa13.51□□□□□ -0.25
FN1-217ENST00000471193 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.51□□□□□ -0.25
FN1-217ENST00000471193 JAK2O60674 1132 aa13.5□□□□□ -0.25
FN1-217ENST00000471193 SMARCA1P28370 1054 aa13.5□□□□□ -0.25
FN1-217ENST00000471193 SLC4A3P48751 1232 aa13.5□□□□□ -0.25
FN1-217ENST00000471193 MOGSQ13724 837 aa13.5□□□□□ -0.25
FN1-217ENST00000471193 SPRYD7Q5W111 196 aa13.5□□□□□ -0.25
FN1-217ENST00000471193 RGMBQ6NW40 437 aa13.5□□□□□ -0.25
FN1-217ENST00000471193 BTNL9Q6UXG8 535 aa13.5□□□□□ -0.25
FN1-217ENST00000471193 NBPF11Q86T75 865 aa13.5□□□□□ -0.25
FN1-217ENST00000471193 CMTR1Q8N1G2 835 aaKnown RBP13.5□□□□□ -0.25
FN1-217ENST00000471193 GPCPD1Q9NPB8 672 aa13.5□□□□□ -0.25
FN1-217ENST00000471193 PARP14Q460N5 1801 aa13.49□□□□□ -0.25
FN1-217ENST00000471193 TMEM232C9JQI7 657 aa13.49□□□□□ -0.25
FN1-217ENST00000471193 CYTH3O43739 400 aa13.49□□□□□ -0.25
FN1-217ENST00000471193 PLA2G6O60733 806 aa13.49□□□□□ -0.25
FN1-217ENST00000471193 FMNL1O95466 1100 aaPredicted RBP13.49□□□□□ -0.25
FN1-217ENST00000471193 HSP90AA1P07900 732 aaKnown RBP13.49□□□□□ -0.25
FN1-217ENST00000471193 SLC10A3P09131 477 aa13.49□□□□□ -0.25
FN1-217ENST00000471193 APLP1P51693 650 aa13.49□□□□□ -0.25
FN1-217ENST00000471193 ZNF157P51786 506 aaPredicted RBP13.49□□□□□ -0.25
FN1-217ENST00000471193 STAT2P52630 851 aa13.49□□□□□ -0.25
FN1-217ENST00000471193 HMGN5P82970 282 aaKnown RBP13.49□□□□□ -0.25
FN1-217ENST00000471193 SNAPC2Q13487 334 aa13.49□□□□□ -0.25
FN1-217ENST00000471193 TTBK2Q6IQ55 1244 aa13.49□□□□□ -0.25
FN1-217ENST00000471193 PHKBQ93100 1093 aa13.49□□□□□ -0.25
FN1-217ENST00000471193 RNF26Q9BY78 433 aaPredicted RBP13.49□□□□□ -0.25
FN1-217ENST00000471193 CPVLQ9H3G5 476 aa13.49□□□□□ -0.25
FN1-217ENST00000471193 RPAP3Q9H6T3 665 aaPredicted RBP13.49□□□□□ -0.25
FN1-217ENST00000471193 RIOX1Q9H6W3 641 aa13.49□□□□□ -0.25
FN1-217ENST00000471193 FOXD4L1Q9NU39 408 aa13.49□□□□□ -0.25
FN1-217ENST00000471193 ISY1Q9ULR0 285 aaKnown RBP13.49□□□□□ -0.25
FN1-217ENST00000471193 ABT1Q9ULW3 272 aaKnown RBP13.49□□□□□ -0.25
FN1-217ENST00000471193 A0A0G2JMZ2 1700 aa13.48□□□□□ -0.25
FN1-217ENST00000471193 DTNBO60941 627 aa13.48□□□□□ -0.25
FN1-217ENST00000471193 SLC16A2P36021 539 aa13.48□□□□□ -0.25
FN1-217ENST00000471193 GTF2A2P52657 109 aa13.48□□□□□ -0.25
FN1-217ENST00000471193 TREML2Q5T2D2 321 aa13.48□□□□□ -0.25
FN1-217ENST00000471193 SYDE2Q5VT97 1194 aa13.48□□□□□ -0.25
FN1-217ENST00000471193 FAM160B2Q86V87 743 aa13.48□□□□□ -0.25
FN1-217ENST00000471193 MS4A4AQ96JQ5 239 aa13.48□□□□□ -0.25
FN1-217ENST00000471193 SLC26A6Q9BXS9 759 aa13.48□□□□□ -0.25
FN1-217ENST00000471193 TANGO6Q9C0B7 1094 aa13.48□□□□□ -0.25
FN1-217ENST00000471193 UBA5Q9GZZ9 404 aa13.48□□□□□ -0.25
FN1-217ENST00000471193 CREBZFQ9NS37 354 aa13.48□□□□□ -0.25
FN1-217ENST00000471193 DAXXQ9UER7 740 aaPredicted RBP13.48□□□□□ -0.25
FN1-217ENST00000471193 FEM1BQ9UK73 627 aa13.48□□□□□ -0.25
FN1-217ENST00000471193 AGTPBP1Q9UPW5 1226 aa13.48□□□□□ -0.25
FN1-217ENST00000471193 SMC3Q9UQE7 1217 aa13.48□□□□□ -0.25
FN1-217ENST00000471193 FAM155AB1AL88 458 aaPredicted RBP13.47□□□□□ -0.25
FN1-217ENST00000471193 PRPF3O43395 683 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms