RNA–Protein interactions for RNA: ENST00000470994.1

GPNMB-208, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 538 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-208ENST00000470994 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.01□□□□□ -1.13
GPNMB-208ENST00000470994 CD163L1Q9NR16 1453 aa8□□□□□ -1.13
GPNMB-208ENST00000470994 TRPM1Q7Z4N2 1603 aa8□□□□□ -1.13
GPNMB-208ENST00000470994 NFAT5O94916 1531 aa8□□□□□ -1.13
GPNMB-208ENST00000470994 PIK3C2AO00443 1686 aa8□□□□□ -1.13
GPNMB-208ENST00000470994 FUT4P22083 530 aa8□□□□□ -1.13
GPNMB-208ENST00000470994 HNRNPUQ00839 825 aaKnown RBP eCLIP8□□□□□ -1.13
GPNMB-208ENST00000470994 TRIM26Q12899 539 aaPredicted RBP8□□□□□ -1.13
GPNMB-208ENST00000470994 HSP90AB2PQ58FF8 381 aa8□□□□□ -1.13
GPNMB-208ENST00000470994 SEZ6L2Q6UXD5 910 aa8□□□□□ -1.13
GPNMB-208ENST00000470994 SPRED2Q7Z698 418 aa8□□□□□ -1.13
GPNMB-208ENST00000470994 NETO1Q8TDF5 533 aa8□□□□□ -1.13
GPNMB-208ENST00000470994 GTF3C2Q8WUA4 911 aaPredicted RBP8□□□□□ -1.13
GPNMB-208ENST00000470994 GSX1Q9H4S2 264 aaPredicted RBP8□□□□□ -1.13
GPNMB-208ENST00000470994 C1GALT1Q9NS00 363 aa8□□□□□ -1.13
GPNMB-208ENST00000470994 FAM13AO94988 1023 aa7.99□□□□□ -1.13
GPNMB-208ENST00000470994 MPRIPQ6WCQ1 1025 aa7.99□□□□□ -1.13
GPNMB-208ENST00000470994 CCNJLQ8IV13 435 aa7.99□□□□□ -1.13
GPNMB-208ENST00000470994 PCGF6Q9BYE7 350 aa7.99□□□□□ -1.13
GPNMB-208ENST00000470994 PNPLA7Q6ZV29 1317 aa7.99□□□□□ -1.13
GPNMB-208ENST00000470994 SYNGAP1Q96PV0 1343 aa7.99□□□□□ -1.13
GPNMB-208ENST00000470994 PARP4Q9UKK3 1724 aaKnown RBP7.98□□□□□ -1.13
GPNMB-208ENST00000470994 PDE3AQ14432 1141 aa7.98□□□□□ -1.13
GPNMB-208ENST00000470994 ZNF423Q2M1K9 1284 aa7.98□□□□□ -1.13
GPNMB-208ENST00000470994 KRTAP19-4Q3LI73 84 aa7.98□□□□□ -1.13
GPNMB-208ENST00000470994 SPOCD1Q6ZMY3 1216 aa7.98□□□□□ -1.13
GPNMB-208ENST00000470994 GLIS3Q8NEA6 775 aa7.98□□□□□ -1.13
GPNMB-208ENST00000470994 LIN7BQ9HAP6 207 aa7.98□□□□□ -1.13
GPNMB-208ENST00000470994 ZFYVE28Q9HCC9 887 aa7.98□□□□□ -1.13
GPNMB-208ENST00000470994 LRRC37A3O60309 1634 aa7.98□□□□□ -1.13
GPNMB-208ENST00000470994 ANKRD36BQ8N2N9 1353 aa7.97□□□□□ -1.13
GPNMB-208ENST00000470994 USP47Q96K76 1375 aa7.97□□□□□ -1.13
GPNMB-208ENST00000470994 COL18A1P39060 1754 aa7.97□□□□□ -1.13
GPNMB-208ENST00000470994 TNNT2P45379 298 aaPredicted RBP7.97□□□□□ -1.13
GPNMB-208ENST00000470994 ARHGAP27Q6ZUM4 889 aa7.97□□□□□ -1.13
GPNMB-208ENST00000470994 COL23A1Q86Y22 540 aaPredicted RBP7.97□□□□□ -1.13
GPNMB-208ENST00000470994 PI4K2BQ8TCG2 481 aa7.97□□□□□ -1.13
GPNMB-208ENST00000470994 VAV3Q9UKW4 847 aa7.97□□□□□ -1.13
GPNMB-208ENST00000470994 MTMR7Q9Y216 660 aa7.97□□□□□ -1.13
GPNMB-208ENST00000470994 NUP188Q5SRE5 1749 aa7.97□□□□□ -1.13
GPNMB-208ENST00000470994 SMG6Q86US8 1419 aaKnown RBP7.96□□□□□ -1.13
GPNMB-208ENST00000470994 PEAK1Q9H792 1746 aa7.96□□□□□ -1.14
GPNMB-208ENST00000470994 DYNC1LI2O43237 492 aaPredicted RBP7.96□□□□□ -1.14
GPNMB-208ENST00000470994 AOC2O75106 756 aa7.96□□□□□ -1.14
GPNMB-208ENST00000470994 CTSBP07858 339 aa7.96□□□□□ -1.14
GPNMB-208ENST00000470994 BNIP3Q12983 259 aa7.96□□□□□ -1.14
GPNMB-208ENST00000470994 AP3B2Q13367 1082 aa7.96□□□□□ -1.14
GPNMB-208ENST00000470994 WFDC3Q8IUB2 231 aa7.96□□□□□ -1.14
GPNMB-208ENST00000470994 NLGN2Q8NFZ4 835 aa7.96□□□□□ -1.14
GPNMB-208ENST00000470994 PIDD1Q9HB75 910 aa7.96□□□□□ -1.14
GPNMB-208ENST00000470994 CGNL1Q0VF96 1302 aa7.96□□□□□ -1.14
GPNMB-208ENST00000470994 RREB1Q92766 1687 aa7.95□□□□□ -1.14
GPNMB-208ENST00000470994 B3GALT4O96024 378 aa7.95□□□□□ -1.14
GPNMB-208ENST00000470994 FAM87AP0C7U9 286 aa7.95□□□□□ -1.14
GPNMB-208ENST00000470994 CD8BP10966 210 aa7.95□□□□□ -1.14
GPNMB-208ENST00000470994 NPR3P17342 541 aa7.95□□□□□ -1.14
GPNMB-208ENST00000470994 HMGB2P26583 209 aaKnown RBP7.95□□□□□ -1.14
GPNMB-208ENST00000470994 PRKCQQ04759 706 aa7.95□□□□□ -1.14
GPNMB-208ENST00000470994 PLD6Q8N2A8 252 aaKnown RBP7.95□□□□□ -1.14
GPNMB-208ENST00000470994 BHLHE22Q8NFJ8 381 aaPredicted RBP7.95□□□□□ -1.14
GPNMB-208ENST00000470994 SMARCC1Q92922 1105 aaPredicted RBP7.95□□□□□ -1.14
GPNMB-208ENST00000470994 FAM84AQ96KN4 292 aa7.95□□□□□ -1.14
GPNMB-208ENST00000470994 KRTAP4-2Q9BYR5 136 aa7.95□□□□□ -1.14
GPNMB-208ENST00000470994 LGR6Q9HBX8 967 aa7.95□□□□□ -1.14
GPNMB-208ENST00000470994 WWC3Q9ULE0 1092 aa7.95□□□□□ -1.14
GPNMB-208ENST00000470994 SPG7Q9UQ90 795 aa7.95□□□□□ -1.14
GPNMB-208ENST00000470994 PCDH11XQ9BZA7 1347 aa7.95□□□□□ -1.14
GPNMB-208ENST00000470994 PCDH11YQ9BZA8 1340 aa7.95□□□□□ -1.14
GPNMB-208ENST00000470994 CYP27B1O15528 508 aa7.94□□□□□ -1.14
GPNMB-208ENST00000470994 GRIN3BO60391 1043 aa7.94□□□□□ -1.14
GPNMB-208ENST00000470994 RNASE1P07998 156 aaKnown RBP7.94□□□□□ -1.14
GPNMB-208ENST00000470994 IFI16Q16666 785 aaKnown RBP7.94□□□□□ -1.14
GPNMB-208ENST00000470994 LCE4AQ5TA78 99 aa7.94□□□□□ -1.14
GPNMB-208ENST00000470994 SMIM5Q71RC9 77 aa7.94□□□□□ -1.14
GPNMB-208ENST00000470994 GJD3Q8N144 294 aa7.94□□□□□ -1.14
GPNMB-208ENST00000470994 FLAD1Q8NFF5 587 aa7.94□□□□□ -1.14
GPNMB-208ENST00000470994 TRIM56Q9BRZ2 755 aaKnown RBP7.94□□□□□ -1.14
GPNMB-208ENST00000470994 ATXN3LQ9H3M9 355 aa7.94□□□□□ -1.14
GPNMB-208ENST00000470994 MKNK2Q9HBH9 465 aa7.94□□□□□ -1.14
GPNMB-208ENST00000470994 MBNL3Q9NUK0 354 aaKnown RBP7.94□□□□□ -1.14
GPNMB-208ENST00000470994 RTL1A6NKG5 1358 aa7.94□□□□□ -1.14
GPNMB-208ENST00000470994 MEGF6O75095 1541 aa7.93□□□□□ -1.14
GPNMB-208ENST00000470994 ABCC6O95255 1503 aa7.93□□□□□ -1.14
GPNMB-208ENST00000470994 KAT6BQ8WYB5 2073 aa7.93□□□□□ -1.14
GPNMB-208ENST00000470994 A0A1W2PP55 124 aa7.93□□□□□ -1.14
GPNMB-208ENST00000470994 POLR3DP05423 398 aaPredicted RBP7.93□□□□□ -1.14
GPNMB-208ENST00000470994 GRIA4P48058 902 aa7.93□□□□□ -1.14
GPNMB-208ENST00000470994 C1QTNF8P60827 252 aa7.93□□□□□ -1.14
GPNMB-208ENST00000470994 SPRED3Q2MJR0 410 aa7.93□□□□□ -1.14
GPNMB-208ENST00000470994 ANGEL2Q5VTE6 544 aaKnown RBP7.93□□□□□ -1.14
GPNMB-208ENST00000470994 GALNT12Q8IXK2 581 aa7.93□□□□□ -1.14
GPNMB-208ENST00000470994 FAM181AQ8N9Y4 354 aa7.93□□□□□ -1.14
GPNMB-208ENST00000470994 LRRN4CLQ8ND94 238 aa7.93□□□□□ -1.14
GPNMB-208ENST00000470994 PIGBQ92521 554 aa7.93□□□□□ -1.14
GPNMB-208ENST00000470994 CCDC97Q96F63 343 aaPredicted RBP7.93□□□□□ -1.14
GPNMB-208ENST00000470994 HRASLS5Q96KN8 279 aa7.93□□□□□ -1.14
GPNMB-208ENST00000470994 TCF12Q99081 682 aa7.93□□□□□ -1.14
GPNMB-208ENST00000470994 WDR18Q9BV38 432 aa7.93□□□□□ -1.14
GPNMB-208ENST00000470994 FAM53CQ9NYF3 392 aa7.93□□□□□ -1.14
GPNMB-208ENST00000470994 TMOD3Q9NYL9 352 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms