RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 MFSD14BQ5SR56 506 aa7.88□□□□□ -1.15
VAMP3-202ENST00000470357 STRIP1Q5VSL9 837 aa7.88□□□□□ -1.15
VAMP3-202ENST00000470357 TTLL5Q6EMB2 1281 aa7.88□□□□□ -1.15
VAMP3-202ENST00000470357 DLK2Q6UY11 383 aa7.88□□□□□ -1.15
VAMP3-202ENST00000470357 MEIOBQ8N635 442 aa7.88□□□□□ -1.15
VAMP3-202ENST00000470357 OSBP2Q969R2 916 aa7.88□□□□□ -1.15
VAMP3-202ENST00000470357 TRIM47Q96LD4 638 aa7.88□□□□□ -1.15
VAMP3-202ENST00000470357 RBM8AQ9Y5S9 174 aaKnown RBP7.88□□□□□ -1.15
VAMP3-202ENST00000470357 USP17L3A6NCW0 530 aa7.87□□□□□ -1.15
VAMP3-202ENST00000470357 USP17L4A6NCW7 530 aa7.87□□□□□ -1.15
VAMP3-202ENST00000470357 ECE2O60344 883 aa7.87□□□□□ -1.15
VAMP3-202ENST00000470357 LILRA1O75019 489 aa7.87□□□□□ -1.15
VAMP3-202ENST00000470357 HSPD1P10809 573 aaKnown RBP7.87□□□□□ -1.15
VAMP3-202ENST00000470357 BMP2P12643 396 aa7.87□□□□□ -1.15
VAMP3-202ENST00000470357 MCM2P49736 904 aa7.87□□□□□ -1.15
VAMP3-202ENST00000470357 GMPSP49915 693 aaPredicted RBP7.87□□□□□ -1.15
VAMP3-202ENST00000470357 SOX10P56693 466 aa7.87□□□□□ -1.15
VAMP3-202ENST00000470357 GTF2IP78347 998 aa7.87□□□□□ -1.15
VAMP3-202ENST00000470357 HDLBPQ00341 1268 aaKnown RBP7.87□□□□□ -1.15
VAMP3-202ENST00000470357 MECOMQ03112 1051 aa7.87□□□□□ -1.15
VAMP3-202ENST00000470357 NECTIN1Q15223 517 aa7.87□□□□□ -1.15
VAMP3-202ENST00000470357 ALX1Q15699 326 aa7.87□□□□□ -1.15
VAMP3-202ENST00000470357 AOC3Q16853 763 aa7.87□□□□□ -1.15
VAMP3-202ENST00000470357 TSGA10IPQ3SY00 556 aa7.87□□□□□ -1.15
VAMP3-202ENST00000470357 GIMAP6Q6P9H5 292 aa7.87□□□□□ -1.15
VAMP3-202ENST00000470357 Q6ZVU0 165 aa7.87□□□□□ -1.15
VAMP3-202ENST00000470357 USP17L1Q7RTZ2 530 aa7.87□□□□□ -1.15
VAMP3-202ENST00000470357 ZNF589Q86UQ0 364 aaPredicted RBP7.87□□□□□ -1.15
VAMP3-202ENST00000470357 NIM1KQ8IY84 436 aa7.87□□□□□ -1.15
VAMP3-202ENST00000470357 TRPM4Q8TD43 1214 aa7.87□□□□□ -1.15
VAMP3-202ENST00000470357 KCNB2Q92953 911 aa7.87□□□□□ -1.15
VAMP3-202ENST00000470357 NSUN4Q96CB9 384 aaKnown RBP7.87□□□□□ -1.15
VAMP3-202ENST00000470357 AGBL1Q96MI9 1066 aa7.87□□□□□ -1.15
VAMP3-202ENST00000470357 MRIQ9BWK5 157 aa7.87□□□□□ -1.15
VAMP3-202ENST00000470357 CRNKL1Q9BZJ0 848 aaKnown RBP7.87□□□□□ -1.15
VAMP3-202ENST00000470357 TM6SF1Q9BZW5 370 aa7.87□□□□□ -1.15
VAMP3-202ENST00000470357 SCN9AQ15858 1988 aa7.87□□□□□ -1.15
VAMP3-202ENST00000470357 ZNF646O15015 1829 aaPredicted RBP7.87□□□□□ -1.15
VAMP3-202ENST00000470357 FOCADQ5VW36 1801 aa7.87□□□□□ -1.15
VAMP3-202ENST00000470357 ECM29Q5VYK3 1845 aa7.87□□□□□ -1.15
VAMP3-202ENST00000470357 MROH7-TTC4A0A0A0MT08 1334 aa7.86□□□□□ -1.15
VAMP3-202ENST00000470357 CDK5RAP2Q96SN8 1893 aa7.86□□□□□ -1.15
VAMP3-202ENST00000470357 SHTN1A0MZ66 631 aa7.86□□□□□ -1.15
VAMP3-202ENST00000470357 PATL2C9JE40 543 aaKnown RBP7.86□□□□□ -1.15
VAMP3-202ENST00000470357 M0R2C6 588 aa7.86□□□□□ -1.15
VAMP3-202ENST00000470357 UPP2O95045 317 aa7.86□□□□□ -1.15
VAMP3-202ENST00000470357 MBD4O95243 580 aa7.86□□□□□ -1.15
VAMP3-202ENST00000470357 HMGB1P09429 215 aaKnown RBP7.86□□□□□ -1.15
VAMP3-202ENST00000470357 PRDX5P30044 214 aa7.86□□□□□ -1.15
VAMP3-202ENST00000470357 PTH1RQ03431 593 aa7.86□□□□□ -1.15
VAMP3-202ENST00000470357 NOGQ13253 232 aa7.86□□□□□ -1.15
VAMP3-202ENST00000470357 SEMA3FQ13275 785 aa7.86□□□□□ -1.15
VAMP3-202ENST00000470357 IMMTQ16891 758 aaKnown RBP7.86□□□□□ -1.15
VAMP3-202ENST00000470357 CDC37L1Q7L3B6 337 aa7.86□□□□□ -1.15
VAMP3-202ENST00000470357 LINC00528Q8N1L1 170 aa7.86□□□□□ -1.15
VAMP3-202ENST00000470357 KIFC2Q96AC6 838 aa7.86□□□□□ -1.15
VAMP3-202ENST00000470357 STRBPQ96SI9 672 aaKnown RBP7.86□□□□□ -1.15
VAMP3-202ENST00000470357 SEC62Q99442 399 aaKnown RBP7.86□□□□□ -1.15
VAMP3-202ENST00000470357 TSEN34Q9BSV6 310 aaKnown RBP7.86□□□□□ -1.15
VAMP3-202ENST00000470357 PUS7LQ9H0K6 701 aaKnown RBP7.86□□□□□ -1.15
VAMP3-202ENST00000470357 IL25Q9H293 177 aa7.86□□□□□ -1.15
VAMP3-202ENST00000470357 CYLDQ9NQC7 956 aa7.86□□□□□ -1.15
VAMP3-202ENST00000470357 SAGE1Q9NXZ1 904 aa7.86□□□□□ -1.15
VAMP3-202ENST00000470357 ZNRF3Q9ULT6 936 aa7.86□□□□□ -1.15
VAMP3-202ENST00000470357 PCDHB11Q9Y5F2 797 aa7.86□□□□□ -1.15
VAMP3-202ENST00000470357 LAMB1P07942 1786 aa7.86□□□□□ -1.15
VAMP3-202ENST00000470357 BAZ2AQ9UIF9 1905 aaKnown RBP7.86□□□□□ -1.15
VAMP3-202ENST00000470357 NAV1Q8NEY1 1877 aa7.85□□□□□ -1.15
VAMP3-202ENST00000470357 MKI67P46013 3256 aaKnown RBP7.85□□□□□ -1.15
VAMP3-202ENST00000470357 APPP05067 770 aa7.85□□□□□ -1.15
VAMP3-202ENST00000470357 NT5C2P49902 561 aa7.85□□□□□ -1.15
VAMP3-202ENST00000470357 CREB3L3Q68CJ9 461 aa7.85□□□□□ -1.15
VAMP3-202ENST00000470357 HHIPL2Q6UWX4 724 aa7.85□□□□□ -1.15
VAMP3-202ENST00000470357 CCDC129Q6ZRS4 1044 aa7.85□□□□□ -1.15
VAMP3-202ENST00000470357 HSCBQ8IWL3 235 aa7.85□□□□□ -1.15
VAMP3-202ENST00000470357 AMOTL1Q8IY63 956 aa7.85□□□□□ -1.15
VAMP3-202ENST00000470357 SNX21Q969T3 373 aa7.85□□□□□ -1.15
VAMP3-202ENST00000470357 IPO9Q96P70 1041 aaKnown RBP7.85□□□□□ -1.15
VAMP3-202ENST00000470357 NAPBQ9H115 298 aa7.85□□□□□ -1.15
VAMP3-202ENST00000470357 DBNDD1Q9H9R9 158 aa7.85□□□□□ -1.15
VAMP3-202ENST00000470357 ATP8A2Q9NTI2 1148 aa7.85□□□□□ -1.15
VAMP3-202ENST00000470357 RNF186Q9NXI6 227 aa7.85□□□□□ -1.15
VAMP3-202ENST00000470357 SNX14Q9Y5W7 946 aa7.85□□□□□ -1.15
VAMP3-202ENST00000470357 SLC4A4Q9Y6R1 1079 aa7.85□□□□□ -1.15
VAMP3-202ENST00000470357 MYH1P12882 1939 aa7.85□□□□□ -1.15
VAMP3-202ENST00000470357 GAKO14976 1311 aa7.84□□□□□ -1.15
VAMP3-202ENST00000470357 GPR75-ASB3A0A0A6YYF3 556 aa7.84□□□□□ -1.15
VAMP3-202ENST00000470357 YDJCA8MPS7 323 aa7.84□□□□□ -1.15
VAMP3-202ENST00000470357 ZNF213O14771 459 aa7.84□□□□□ -1.15
VAMP3-202ENST00000470357 SLC27A2O14975 620 aa7.84□□□□□ -1.15
VAMP3-202ENST00000470357 SLC3A2P08195 630 aaKnown RBP7.84□□□□□ -1.15
VAMP3-202ENST00000470357 PCP11498 1178 aaKnown RBP7.84□□□□□ -1.15
VAMP3-202ENST00000470357 TDO2P48775 406 aa7.84□□□□□ -1.15
VAMP3-202ENST00000470357 HUNKP57058 714 aa7.84□□□□□ -1.15
VAMP3-202ENST00000470357 RELBQ01201 579 aa7.84□□□□□ -1.15
VAMP3-202ENST00000470357 KIF23Q02241 960 aaPredicted RBP7.84□□□□□ -1.15
VAMP3-202ENST00000470357 TRDNQ13061 729 aa7.84□□□□□ -1.15
VAMP3-202ENST00000470357 TNIP1Q15025 636 aa7.84□□□□□ -1.15
VAMP3-202ENST00000470357 DACT2Q5SW24 774 aa7.84□□□□□ -1.15
VAMP3-202ENST00000470357 RGMBQ6NW40 437 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms