RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 PGK1P00558 417 aa10.84□□□□□ -0.67
SYNGAP1-205ENST00000470232 BMP1P13497 986 aa10.84□□□□□ -0.67
SYNGAP1-205ENST00000470232 AKR1A1P14550 325 aa10.84□□□□□ -0.67
SYNGAP1-205ENST00000470232 MCAMP43121 646 aa10.84□□□□□ -0.67
SYNGAP1-205ENST00000470232 G3BP1Q13283 466 aaKnown RBP eCLIP10.84□□□□□ -0.67
SYNGAP1-205ENST00000470232 TMEM31Q5JXX7 168 aa10.84□□□□□ -0.67
SYNGAP1-205ENST00000470232 TTC39AQ5SRH9 613 aa10.84□□□□□ -0.67
SYNGAP1-205ENST00000470232 TMEM240Q5SV17 173 aa10.84□□□□□ -0.67
SYNGAP1-205ENST00000470232 ACER1Q8TDN7 264 aa10.84□□□□□ -0.67
SYNGAP1-205ENST00000470232 TANGO6Q9C0B7 1094 aa10.84□□□□□ -0.67
SYNGAP1-205ENST00000470232 EHD4Q9H223 541 aa10.84□□□□□ -0.67
SYNGAP1-205ENST00000470232 CNPY2Q9Y2B0 182 aa10.84□□□□□ -0.67
SYNGAP1-205ENST00000470232 SMCHD1A6NHR9 2005 aa10.84□□□□□ -0.67
SYNGAP1-205ENST00000470232 SIPA1L1O43166 1804 aa10.84□□□□□ -0.67
SYNGAP1-205ENST00000470232 ZNF236Q9UL36 1845 aa10.84□□□□□ -0.67
SYNGAP1-205ENST00000470232 PLXNA1Q9UIW2 1896 aa10.83□□□□□ -0.68
SYNGAP1-205ENST00000470232 APBB1O00213 710 aa10.83□□□□□ -0.68
SYNGAP1-205ENST00000470232 TLR3O15455 904 aaKnown RBP10.83□□□□□ -0.68
SYNGAP1-205ENST00000470232 GNAI3P08754 354 aa10.83□□□□□ -0.68
SYNGAP1-205ENST00000470232 PBX2P40425 430 aa10.83□□□□□ -0.68
SYNGAP1-205ENST00000470232 ACLYP53396 1101 aa10.83□□□□□ -0.68
SYNGAP1-205ENST00000470232 HERVK_113Q902F9 699 aa10.83□□□□□ -0.68
SYNGAP1-205ENST00000470232 VTI1AQ96AJ9 217 aa10.83□□□□□ -0.68
SYNGAP1-205ENST00000470232 GLT1D1Q96MS3 346 aa10.83□□□□□ -0.68
SYNGAP1-205ENST00000470232 TINF2Q9BSI4 451 aa10.83□□□□□ -0.68
SYNGAP1-205ENST00000470232 LRFN3Q9BTN0 628 aa10.83□□□□□ -0.68
SYNGAP1-205ENST00000470232 API5Q9BZZ5 524 aaKnown RBP10.83□□□□□ -0.68
SYNGAP1-205ENST00000470232 DIS3Q9Y2L1 958 aaKnown RBP10.83□□□□□ -0.68
SYNGAP1-205ENST00000470232 ELP1O95163 1332 aa10.83□□□□□ -0.68
SYNGAP1-205ENST00000470232 XIRP2A4UGR9 3374 aa10.82□□□□□ -0.68
SYNGAP1-205ENST00000470232 GRXCR1A8MXD5 290 aa10.82□□□□□ -0.68
SYNGAP1-205ENST00000470232 FGBP02675 491 aa10.82□□□□□ -0.68
SYNGAP1-205ENST00000470232 ADGRE1Q14246 886 aa10.82□□□□□ -0.68
SYNGAP1-205ENST00000470232 KCTD2Q14681 263 aa10.82□□□□□ -0.68
SYNGAP1-205ENST00000470232 SKIV2LQ15477 1246 aaKnown RBP10.82□□□□□ -0.68
SYNGAP1-205ENST00000470232 RASIP1Q5U651 963 aa10.82□□□□□ -0.68
SYNGAP1-205ENST00000470232 ZNF365Q70YC5 407 aa10.82□□□□□ -0.68
SYNGAP1-205ENST00000470232 PCSK9Q8NBP7 692 aaKnown RBP10.82□□□□□ -0.68
SYNGAP1-205ENST00000470232 MMP19Q99542 508 aa10.82□□□□□ -0.68
SYNGAP1-205ENST00000470232 SPC25Q9HBM1 224 aa10.82□□□□□ -0.68
SYNGAP1-205ENST00000470232 SNRKQ9NRH2 765 aa10.82□□□□□ -0.68
SYNGAP1-205ENST00000470232 SMC4Q9NTJ3 1288 aa10.82□□□□□ -0.68
SYNGAP1-205ENST00000470232 FAM184BQ9ULE4 1060 aa10.82□□□□□ -0.68
SYNGAP1-205ENST00000470232 TCF20Q9UGU0 1960 aaKnown RBP10.81□□□□□ -0.68
SYNGAP1-205ENST00000470232 E9PSI1 815 aa10.81□□□□□ -0.68
SYNGAP1-205ENST00000470232 MPHOSPH10O00566 681 aaKnown RBP10.81□□□□□ -0.68
SYNGAP1-205ENST00000470232 GTPBP6O43824 516 aaPredicted RBP10.81□□□□□ -0.68
SYNGAP1-205ENST00000470232 FLOT1O75955 427 aa10.81□□□□□ -0.68
SYNGAP1-205ENST00000470232 CYP7A1P22680 504 aa10.81□□□□□ -0.68
SYNGAP1-205ENST00000470232 COPB2P35606 906 aa10.81□□□□□ -0.68
SYNGAP1-205ENST00000470232 KCNA10Q16322 511 aa10.81□□□□□ -0.68
SYNGAP1-205ENST00000470232 TMED8Q6PL24 325 aaPredicted RBP10.81□□□□□ -0.68
SYNGAP1-205ENST00000470232 C16orf59Q7L2K0 433 aa10.81□□□□□ -0.68
SYNGAP1-205ENST00000470232 MICALL1Q8N3F8 863 aa10.81□□□□□ -0.68
SYNGAP1-205ENST00000470232 NKX2-4Q9H2Z4 354 aa10.81□□□□□ -0.68
SYNGAP1-205ENST00000470232 SH2D4AQ9H788 454 aa10.81□□□□□ -0.68
SYNGAP1-205ENST00000470232 IL23AQ9NPF7 189 aa10.81□□□□□ -0.68
SYNGAP1-205ENST00000470232 TBX21Q9UL17 535 aa10.81□□□□□ -0.68
SYNGAP1-205ENST00000470232 COG5Q9UP83 839 aa10.81□□□□□ -0.68
SYNGAP1-205ENST00000470232 ZNFX1Q9P2E3 1918 aaKnown RBP10.81□□□□□ -0.68
SYNGAP1-205ENST00000470232 ZNF521Q96K83 1311 aa10.81□□□□□ -0.68
SYNGAP1-205ENST00000470232 CDK5RAP2Q96SN8 1893 aa10.81□□□□□ -0.68
SYNGAP1-205ENST00000470232 CHD9Q3L8U1 2897 aa10.8□□□□□ -0.68
SYNGAP1-205ENST00000470232 MYH1P12882 1939 aa10.8□□□□□ -0.68
SYNGAP1-205ENST00000470232 FOCADQ5VW36 1801 aa10.8□□□□□ -0.68
SYNGAP1-205ENST00000470232 A0A0U1RQG5 324 aaPredicted RBP10.8□□□□□ -0.68
SYNGAP1-205ENST00000470232 ARVCFO00192 962 aa10.8□□□□□ -0.68
SYNGAP1-205ENST00000470232 ERC2O15083 957 aa10.8□□□□□ -0.68
SYNGAP1-205ENST00000470232 ADAMTS4O75173 837 aa10.8□□□□□ -0.68
SYNGAP1-205ENST00000470232 CYP2E1P05181 493 aaPredicted RBP10.8□□□□□ -0.68
SYNGAP1-205ENST00000470232 POLR3DP05423 398 aaPredicted RBP10.8□□□□□ -0.68
SYNGAP1-205ENST00000470232 ZNF865P0CJ78 1059 aaPredicted RBP10.8□□□□□ -0.68
SYNGAP1-205ENST00000470232 ACRP10323 421 aa10.8□□□□□ -0.68
SYNGAP1-205ENST00000470232 CSF2RAP15509 400 aa10.8□□□□□ -0.68
SYNGAP1-205ENST00000470232 DYNLL1P63167 89 aaKnown RBP10.8□□□□□ -0.68
SYNGAP1-205ENST00000470232 MTX1Q13505 466 aa10.8□□□□□ -0.68
SYNGAP1-205ENST00000470232 SEPT2Q15019 361 aa10.8□□□□□ -0.68
SYNGAP1-205ENST00000470232 ADGRA1Q86SQ6 560 aa10.8□□□□□ -0.68
SYNGAP1-205ENST00000470232 MSL3Q8N5Y2 521 aaKnown RBP10.8□□□□□ -0.68
SYNGAP1-205ENST00000470232 KLHDC9Q8NEP7 349 aa10.8□□□□□ -0.68
SYNGAP1-205ENST00000470232 NECAB3Q96P71 396 aaPredicted RBP10.8□□□□□ -0.68
SYNGAP1-205ENST00000470232 GPR108Q9NPR9 543 aa10.8□□□□□ -0.68
SYNGAP1-205ENST00000470232 ROBO3Q96MS0 1386 aa10.79□□□□□ -0.68
SYNGAP1-205ENST00000470232 GPR37L1O60883 481 aa10.79□□□□□ -0.68
SYNGAP1-205ENST00000470232 DUSP11O75319 330 aaKnown RBP10.79□□□□□ -0.68
SYNGAP1-205ENST00000470232 CDK7P50613 346 aa10.79□□□□□ -0.68
SYNGAP1-205ENST00000470232 ZNF792Q3KQV3 632 aa10.79□□□□□ -0.68
SYNGAP1-205ENST00000470232 PPP2R2DQ66LE6 453 aa10.79□□□□□ -0.68
SYNGAP1-205ENST00000470232 RPUSD2Q8IZ73 545 aaKnown RBP10.79□□□□□ -0.68
SYNGAP1-205ENST00000470232 CCDC136Q96JN2 1154 aa10.79□□□□□ -0.68
SYNGAP1-205ENST00000470232 MEIS3Q99687 375 aa10.79□□□□□ -0.68
SYNGAP1-205ENST00000470232 EPHX3Q9H6B9 360 aa10.79□□□□□ -0.68
SYNGAP1-205ENST00000470232 ARHGEF10LQ9HCE6 1279 aa10.79□□□□□ -0.68
SYNGAP1-205ENST00000470232 NOB1Q9ULX3 412 aaKnown RBP10.79□□□□□ -0.68
SYNGAP1-205ENST00000470232 PGK2P07205 417 aa10.78□□□□□ -0.68
SYNGAP1-205ENST00000470232 ASGR1P07306 291 aa10.78□□□□□ -0.68
SYNGAP1-205ENST00000470232 C6orf222P0C671 652 aaPredicted RBP10.78□□□□□ -0.68
SYNGAP1-205ENST00000470232 TAL1P17542 331 aaPredicted RBP10.78□□□□□ -0.68
SYNGAP1-205ENST00000470232 GUCY1A2P33402 732 aa10.78□□□□□ -0.68
SYNGAP1-205ENST00000470232 SHMT1P34896 483 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms