RNA–Protein interactions for RNA: ENST00000470197.5

GCFC2-205, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 1 (best)

Gene GCFC2, Length 3,648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-205ENST00000470197 GDF6Q6KF10 455 aaPredicted RBP6.18□□□□□ -1.42
GCFC2-205ENST00000470197 FAM35AQ86V20 835 aa6.18□□□□□ -1.42
GCFC2-205ENST00000470197 VPS37AQ8NEZ2 397 aa6.18□□□□□ -1.42
GCFC2-205ENST00000470197 SMG9Q9H0W8 520 aaKnown RBP6.18□□□□□ -1.42
GCFC2-205ENST00000470197 ZFYVE1Q9HBF4 777 aa6.18□□□□□ -1.42
GCFC2-205ENST00000470197 DLL1O00548 723 aa6.17□□□□□ -1.42
GCFC2-205ENST00000470197 FXR1P51114 621 aaKnown RBP eCLIP6.17□□□□□ -1.42
GCFC2-205ENST00000470197 EFHC2Q5JST6 749 aa6.17□□□□□ -1.42
GCFC2-205ENST00000470197 CYFIP1Q7L576 1253 aa6.17□□□□□ -1.42
GCFC2-205ENST00000470197 SPICE1Q8N0Z3 855 aa6.17□□□□□ -1.42
GCFC2-205ENST00000470197 BTN2A2Q8WVV5 523 aa6.17□□□□□ -1.42
GCFC2-205ENST00000470197 ACSBG1Q96GR2 724 aa6.17□□□□□ -1.42
GCFC2-205ENST00000470197 SETD1BQ9UPS6 1966 aaKnown RBP6.17□□□□□ -1.42
GCFC2-205ENST00000470197 TRAV20A0A0B4J274 112 aa6.17□□□□□ -1.42
GCFC2-205ENST00000470197 MT-CO1P00395 513 aa6.17□□□□□ -1.42
GCFC2-205ENST00000470197 FGAP02671 866 aa6.17□□□□□ -1.42
GCFC2-205ENST00000470197 POU3F2P20265 443 aaPredicted RBP6.17□□□□□ -1.42
GCFC2-205ENST00000470197 ADCYAP1R1P41586 468 aa6.17□□□□□ -1.42
GCFC2-205ENST00000470197 MLECQ14165 292 aa6.17□□□□□ -1.42
GCFC2-205ENST00000470197 ZBTB46Q86UZ6 589 aa6.17□□□□□ -1.42
GCFC2-205ENST00000470197 E2F7Q96AV8 911 aa6.17□□□□□ -1.42
GCFC2-205ENST00000470197 TJP2Q9UDY2 1190 aa6.17□□□□□ -1.42
GCFC2-205ENST00000470197 PCDHGC5Q9Y5F6 944 aa6.17□□□□□ -1.42
GCFC2-205ENST00000470197 ARNTLO00327 626 aa6.17□□□□□ -1.42
GCFC2-205ENST00000470197 RING1Q06587 406 aa6.17□□□□□ -1.42
GCFC2-205ENST00000470197 PPM1JQ5JR12 505 aa6.17□□□□□ -1.42
GCFC2-205ENST00000470197 FAM83BQ5T0W9 1011 aa6.17□□□□□ -1.42
GCFC2-205ENST00000470197 WWC2Q6AWC2 1192 aa6.17□□□□□ -1.42
GCFC2-205ENST00000470197 NECAB2Q7Z6G3 386 aa6.17□□□□□ -1.42
GCFC2-205ENST00000470197 SYT9Q86SS6 491 aa6.17□□□□□ -1.42
GCFC2-205ENST00000470197 KLHL25Q9H0H3 589 aa6.17□□□□□ -1.42
GCFC2-205ENST00000470197 MS4A5Q9H3V2 200 aa6.17□□□□□ -1.42
GCFC2-205ENST00000470197 INTS7Q9NVH2 962 aaKnown RBP6.17□□□□□ -1.42
GCFC2-205ENST00000470197 LAS1LQ9Y4W2 734 aaKnown RBP6.17□□□□□ -1.42
GCFC2-205ENST00000470197 A6NNZ2 444 aa6.16□□□□□ -1.42
GCFC2-205ENST00000470197 LRRC14Q15048 493 aa6.16□□□□□ -1.42
GCFC2-205ENST00000470197 BRD3Q15059 726 aa6.16□□□□□ -1.42
GCFC2-205ENST00000470197 LRGUKQ96M69 825 aa6.16□□□□□ -1.42
GCFC2-205ENST00000470197 H2AFY2Q9P0M6 372 aaPredicted RBP6.16□□□□□ -1.42
GCFC2-205ENST00000470197 ZNF451Q9Y4E5 1061 aa6.16□□□□□ -1.42
GCFC2-205ENST00000470197 ERVK-21P61565 698 aa6.16□□□□□ -1.42
GCFC2-205ENST00000470197 GSTM4Q03013 218 aa6.16□□□□□ -1.42
GCFC2-205ENST00000470197 IKBKEQ14164 716 aa6.16□□□□□ -1.42
GCFC2-205ENST00000470197 INAVAQ3KP66 663 aa6.16□□□□□ -1.42
GCFC2-205ENST00000470197 NSMFQ6X4W1 530 aa6.16□□□□□ -1.42
GCFC2-205ENST00000470197 PI4K2BQ8TCG2 481 aa6.16□□□□□ -1.42
GCFC2-205ENST00000470197 C1orf159Q96HA4 380 aa6.16□□□□□ -1.42
GCFC2-205ENST00000470197 CARD10Q9BWT7 1032 aa6.16□□□□□ -1.42
GCFC2-205ENST00000470197 UBA5Q9GZZ9 404 aa6.16□□□□□ -1.42
GCFC2-205ENST00000470197 TCRBV16S1A1N1A0A5B0 115 aa6.16□□□□□ -1.42
GCFC2-205ENST00000470197 TUBB8Q3ZCM7 444 aa6.16□□□□□ -1.42
GCFC2-205ENST00000470197 NUCKS1Q9H1E3 243 aaKnown RBP6.16□□□□□ -1.42
GCFC2-205ENST00000470197 OPA1O60313 960 aa6.15□□□□□ -1.42
GCFC2-205ENST00000470197 UPP2O95045 317 aa6.15□□□□□ -1.42
GCFC2-205ENST00000470197 BPIP17213 487 aa6.15□□□□□ -1.42
GCFC2-205ENST00000470197 MAOBP27338 520 aa6.15□□□□□ -1.42
GCFC2-205ENST00000470197 ECE1P42892 770 aa6.15□□□□□ -1.42
GCFC2-205ENST00000470197 SAFB2Q14151 953 aaKnown RBP eCLIP6.15□□□□□ -1.42
GCFC2-205ENST00000470197 INO80DQ53TQ3 878 aaPredicted RBP6.15□□□□□ -1.42
GCFC2-205ENST00000470197 SCUBE1Q8IWY4 988 aa6.15□□□□□ -1.42
GCFC2-205ENST00000470197 MRPL4Q9BYD3 311 aaKnown RBP6.15□□□□□ -1.42
GCFC2-205ENST00000470197 ADAM19Q9H013 955 aa6.15□□□□□ -1.42
GCFC2-205ENST00000470197 PCDHA9Q9Y5H5 950 aa6.15□□□□□ -1.42
GCFC2-205ENST00000470197 ABCC2Q92887 1545 aa6.15□□□□□ -1.43
GCFC2-205ENST00000470197 LCHNA4D1U4 455 aa6.15□□□□□ -1.43
GCFC2-205ENST00000470197 PCDHGA12O60330 932 aa6.15□□□□□ -1.43
GCFC2-205ENST00000470197 CRTAMO95727 393 aa6.15□□□□□ -1.43
GCFC2-205ENST00000470197 FOSP01100 380 aaPredicted RBP6.15□□□□□ -1.43
GCFC2-205ENST00000470197 SOD2P04179 222 aa6.15□□□□□ -1.43
GCFC2-205ENST00000470197 PTSQ03393 145 aa6.15□□□□□ -1.43
GCFC2-205ENST00000470197 LRRFIP1Q32MZ4 808 aaKnown RBP6.15□□□□□ -1.43
GCFC2-205ENST00000470197 TMEM201Q5SNT2 666 aa6.15□□□□□ -1.43
GCFC2-205ENST00000470197 PIK3R6Q5UE93 754 aa6.15□□□□□ -1.43
GCFC2-205ENST00000470197 RNF219Q5W0B1 726 aaPredicted RBP6.15□□□□□ -1.43
GCFC2-205ENST00000470197 BAHD1Q8TBE0 780 aaPredicted RBP6.15□□□□□ -1.43
GCFC2-205ENST00000470197 GTPBP3Q969Y2 492 aaKnown RBP6.15□□□□□ -1.43
GCFC2-205ENST00000470197 HIF3AQ9Y2N7 669 aa6.15□□□□□ -1.43
GCFC2-205ENST00000470197 PCDHGA9Q9Y5G4 932 aaKnown RBP6.15□□□□□ -1.43
GCFC2-205ENST00000470197 PCDHGA8Q9Y5G5 932 aa6.15□□□□□ -1.43
GCFC2-205ENST00000470197 PCDHGA7Q9Y5G6 932 aa6.15□□□□□ -1.43
GCFC2-205ENST00000470197 PCDHGA6Q9Y5G7 932 aa6.15□□□□□ -1.43
GCFC2-205ENST00000470197 PCDHGA3Q9Y5H0 932 aa6.15□□□□□ -1.43
GCFC2-205ENST00000470197 PCDHGA2Q9Y5H1 932 aa6.15□□□□□ -1.43
GCFC2-205ENST00000470197 TEX14Q8IWB6 1497 aa6.15□□□□□ -1.43
GCFC2-205ENST00000470197 TSPOAP1O95153 1857 aa6.15□□□□□ -1.43
GCFC2-205ENST00000470197 CD109Q6YHK3 1445 aa6.15□□□□□ -1.43
GCFC2-205ENST00000470197 BAG6P46379 1132 aa6.14□□□□□ -1.43
GCFC2-205ENST00000470197 KCNT2Q6UVM3 1135 aa6.14□□□□□ -1.43
GCFC2-205ENST00000470197 UBE2OQ9C0C9 1292 aaKnown RBP6.14□□□□□ -1.43
GCFC2-205ENST00000470197 MINPP1Q9UNW1 487 aa6.14□□□□□ -1.43
GCFC2-205ENST00000470197 A0A0U1RQG5 324 aaPredicted RBP6.14□□□□□ -1.43
GCFC2-205ENST00000470197 DDX3YO15523 660 aaKnown RBP6.14□□□□□ -1.43
GCFC2-205ENST00000470197 GHRHP01286 108 aa6.14□□□□□ -1.43
GCFC2-205ENST00000470197 HTRA3P83110 453 aa6.14□□□□□ -1.43
GCFC2-205ENST00000470197 GRB10Q13322 594 aa6.14□□□□□ -1.43
GCFC2-205ENST00000470197 DHCR24Q15392 516 aa6.14□□□□□ -1.43
GCFC2-205ENST00000470197 SPATS2Q86XZ4 545 aaKnown RBP6.14□□□□□ -1.43
GCFC2-205ENST00000470197 MAPKBP1O60336 1514 aa6.14□□□□□ -1.43
GCFC2-205ENST00000470197 BDNFP23560 247 aa6.14□□□□□ -1.43
GCFC2-205ENST00000470197 PPM1KQ8N3J5 372 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms