RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 ARHGAP4P98171 946 aa5.81□□□□□ -1.48
COL3A1-205ENST00000470167 COG2Q14746 738 aa5.81□□□□□ -1.48
COL3A1-205ENST00000470167 SMUG1Q53HV7 270 aa5.81□□□□□ -1.48
COL3A1-205ENST00000470167 FAM133BQ5BKY9 247 aaKnown RBP5.81□□□□□ -1.48
COL3A1-205ENST00000470167 C10orf76Q5T2E6 689 aa5.81□□□□□ -1.48
COL3A1-205ENST00000470167 RNF187Q5TA31 235 aaPredicted RBP5.81□□□□□ -1.48
COL3A1-205ENST00000470167 SH3PXD2AQ5TCZ1 1133 aa5.81□□□□□ -1.48
COL3A1-205ENST00000470167 LMBRD2Q68DH5 695 aaPredicted RBP5.81□□□□□ -1.48
COL3A1-205ENST00000470167 CDCA2Q69YH5 1023 aaPredicted RBP5.81□□□□□ -1.48
COL3A1-205ENST00000470167 C16orf46Q6P387 395 aa5.81□□□□□ -1.48
COL3A1-205ENST00000470167 DZIP1Q86YF9 867 aaKnown RBP5.81□□□□□ -1.48
COL3A1-205ENST00000470167 KIAA0825Q8IV33 1275 aa5.81□□□□□ -1.48
COL3A1-205ENST00000470167 MFN1Q8IWA4 741 aa5.81□□□□□ -1.48
COL3A1-205ENST00000470167 TTC39CQ8N584 583 aa5.81□□□□□ -1.48
COL3A1-205ENST00000470167 GIMAP8Q8ND71 665 aaPredicted RBP5.81□□□□□ -1.48
COL3A1-205ENST00000470167 FBXO18Q8NFZ0 1043 aa5.81□□□□□ -1.48
COL3A1-205ENST00000470167 B4GALNT2Q8NHY0 566 aa5.81□□□□□ -1.48
COL3A1-205ENST00000470167 JDP2Q8WYK2 163 aa5.81□□□□□ -1.48
COL3A1-205ENST00000470167 ARHGAP45Q92619 1136 aa5.81□□□□□ -1.48
COL3A1-205ENST00000470167 DTNBP1Q96EV8 351 aa5.81□□□□□ -1.48
COL3A1-205ENST00000470167 CEP95Q96GE4 821 aa5.81□□□□□ -1.48
COL3A1-205ENST00000470167 MAML3Q96JK9 1138 aa5.81□□□□□ -1.48
COL3A1-205ENST00000470167 NEK1Q96PY6 1258 aa5.81□□□□□ -1.48
COL3A1-205ENST00000470167 CORO1BQ9BR76 489 aa5.81□□□□□ -1.48
COL3A1-205ENST00000470167 OSBPL10Q9BXB5 764 aa5.81□□□□□ -1.48
COL3A1-205ENST00000470167 BCL2L13Q9BXK5 485 aa5.81□□□□□ -1.48
COL3A1-205ENST00000470167 FHDC1Q9C0D6 1143 aaPredicted RBP5.81□□□□□ -1.48
COL3A1-205ENST00000470167 TNMDQ9H2S6 317 aa5.81□□□□□ -1.48
COL3A1-205ENST00000470167 MRPL46Q9H2W6 279 aaKnown RBP5.81□□□□□ -1.48
COL3A1-205ENST00000470167 RABEP2Q9H5N1 569 aa5.81□□□□□ -1.48
COL3A1-205ENST00000470167 ZNF395Q9H8N7 513 aaPredicted RBP5.81□□□□□ -1.48
COL3A1-205ENST00000470167 PICK1Q9NRD5 415 aa5.81□□□□□ -1.48
COL3A1-205ENST00000470167 IFT57Q9NWB7 429 aa5.81□□□□□ -1.48
COL3A1-205ENST00000470167 TOR4AQ9NXH8 423 aa5.81□□□□□ -1.48
COL3A1-205ENST00000470167 CROTQ9UKG9 612 aa5.81□□□□□ -1.48
COL3A1-205ENST00000470167 HDAC9Q9UKV0 1011 aa5.81□□□□□ -1.48
COL3A1-205ENST00000470167 PCDHGB3Q9Y5G1 929 aa5.81□□□□□ -1.48
COL3A1-205ENST00000470167 V9GYY5 206 aaPredicted RBP5.81□□□□□ -1.48
COL3A1-205ENST00000470167 EME2A4GXA9 379 aaPredicted RBP5.8□□□□□ -1.48
COL3A1-205ENST00000470167 C2orf81A6NN90 581 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 PRSS47A8MTI9 375 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 CDK2AP1O14519 115 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 SART1O43290 800 aaKnown RBP5.8□□□□□ -1.48
COL3A1-205ENST00000470167 CEP104O60308 925 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 FOXD2O60548 495 aaPredicted RBP5.8□□□□□ -1.48
COL3A1-205ENST00000470167 ATP6V1G1O75348 118 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 ZNF189O75820 626 aaPredicted RBP5.8□□□□□ -1.48
COL3A1-205ENST00000470167 RECKO95980 971 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 CYP1A2P05177 515 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 SFTPCP11686 197 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 RLBP1P12271 317 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 GYS1P13807 737 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 MCM4P33991 863 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 BPIFB3P59826 476 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 CENPCQ03188 943 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 LAMB3Q13751 1172 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 BTG3Q14201 252 aaPredicted RBP5.8□□□□□ -1.48
COL3A1-205ENST00000470167 TNIP1Q15025 636 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 SH2D4BQ5SQS7 431 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 ZNF449Q6P9G9 518 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 UNC5DQ6UXZ4 953 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 CYP26C1Q6V0L0 522 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 CLEC17AQ6ZS10 378 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 TRIM67Q6ZTA4 783 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.8□□□□□ -1.48
COL3A1-205ENST00000470167 NKAIN3Q8N8D7 197 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 BRSK1Q8TDC3 778 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 ZDHHC1Q8WTX9 485 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 APPBP2Q92624 585 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 NELL1Q92832 810 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 HPS3Q969F9 1004 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 RELTQ969Z4 430 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 NGLY1Q96IV0 654 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 NLRP3Q96P20 1036 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 ZSCAN16Q9H4T2 348 aaPredicted RBP5.8□□□□□ -1.48
COL3A1-205ENST00000470167 ANTXR1Q9H6X2 564 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 SYNCQ9H7C4 482 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 KRT82Q9NSB4 513 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 STIM2Q9P246 746 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 HDAC6Q9UBN7 1215 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 MAPK8IP1Q9UQF2 711 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 ZNF510Q9Y2H8 683 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 TMED5Q9Y3A6 229 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 RABGAP1Q9Y3P9 1069 aa5.8□□□□□ -1.48
COL3A1-205ENST00000470167 UHRF1BP1LA0JNW5 1464 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 A0A1B0GUA9 196 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 EML1O00423 815 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 TNFRSF10BO14763 440 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 ERC2O15083 957 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 AHCYL1O43865 530 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 RPS6KA5O75582 802 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 IVLP07476 585 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 SRGNP10124 158 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 IDO1P14902 403 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 GNALP38405 381 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 TNNI2P48788 182 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 COPAP53621 1224 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 CORO7P57737 925 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 SNX16P57768 344 aa5.79□□□□□ -1.48
COL3A1-205ENST00000470167 ARPC4P59998 168 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms