RNA–Protein interactions for RNA: ENST00000469528.5

GAPVD1-214, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 4

Gene GAPVD1, Length 466 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-214ENST00000469528 DNAH12Q6ZR08 3092 aa15.21■□□□□ 0.03
GAPVD1-214ENST00000469528 LAMA3Q16787 3333 aa15.21■□□□□ 0.03
GAPVD1-214ENST00000469528 PRKAB2O43741 272 aa15.21■□□□□ 0.03
GAPVD1-214ENST00000469528 RAD21O60216 631 aa15.21■□□□□ 0.03
GAPVD1-214ENST00000469528 ADCYAP1R1P41586 468 aa15.21■□□□□ 0.03
GAPVD1-214ENST00000469528 TMEM132BQ14DG7 1078 aa15.21■□□□□ 0.03
GAPVD1-214ENST00000469528 LRRC41Q15345 812 aa15.21■□□□□ 0.03
GAPVD1-214ENST00000469528 PRAMEF19Q5SWL8 479 aa15.21■□□□□ 0.03
GAPVD1-214ENST00000469528 RIOX2Q8IUF8 465 aa15.21■□□□□ 0.03
GAPVD1-214ENST00000469528 SLC44A5Q8NCS7 719 aa15.21■□□□□ 0.03
GAPVD1-214ENST00000469528 TINF2Q9BSI4 451 aa15.21■□□□□ 0.03
GAPVD1-214ENST00000469528 PRDM5Q9NQX1 630 aaPredicted RBP15.21■□□□□ 0.03
GAPVD1-214ENST00000469528 ARPP21Q9UBL0 812 aaPredicted RBP15.21■□□□□ 0.03
GAPVD1-214ENST00000469528 CNPY2Q9Y2B0 182 aa15.21■□□□□ 0.03
GAPVD1-214ENST00000469528 COG6Q9Y2V7 657 aa15.21■□□□□ 0.03
GAPVD1-214ENST00000469528 COL6A3P12111 3177 aa15.21■□□□□ 0.03
GAPVD1-214ENST00000469528 VWA5AO00534 786 aa15.2■□□□□ 0.02
GAPVD1-214ENST00000469528 SNX17Q15036 470 aa15.2■□□□□ 0.02
GAPVD1-214ENST00000469528 KIAA1755Q5JYT7 1200 aa15.2■□□□□ 0.02
GAPVD1-214ENST00000469528 CTR9Q6PD62 1173 aa15.2■□□□□ 0.02
GAPVD1-214ENST00000469528 MIER1Q8N108 512 aa15.2■□□□□ 0.02
GAPVD1-214ENST00000469528 MSL3Q8N5Y2 521 aaKnown RBP15.2■□□□□ 0.02
GAPVD1-214ENST00000469528 LRRCC1Q9C099 1032 aa15.2■□□□□ 0.02
GAPVD1-214ENST00000469528 MKNK2Q9HBH9 465 aa15.2■□□□□ 0.02
GAPVD1-214ENST00000469528 XPNPEP3Q9NQH7 507 aa15.2■□□□□ 0.02
GAPVD1-214ENST00000469528 CTDP1Q9Y5B0 961 aaPredicted RBP15.2■□□□□ 0.02
GAPVD1-214ENST00000469528 LRRFIP1Q32MZ4 808 aaKnown RBP15.19■□□□□ 0.02
GAPVD1-214ENST00000469528 ANO1Q5XXA6 986 aa15.19■□□□□ 0.02
GAPVD1-214ENST00000469528 GIMAP6Q6P9H5 292 aa15.19■□□□□ 0.02
GAPVD1-214ENST00000469528 SIRT2Q8IXJ6 389 aa15.19■□□□□ 0.02
GAPVD1-214ENST00000469528 GPATCH3Q96I76 525 aa15.19■□□□□ 0.02
GAPVD1-214ENST00000469528 TSEN34Q9BSV6 310 aaKnown RBP15.19■□□□□ 0.02
GAPVD1-214ENST00000469528 PPP1R9AQ9ULJ8 1098 aa15.19■□□□□ 0.02
GAPVD1-214ENST00000469528 AKR1A1P14550 325 aa15.18■□□□□ 0.02
GAPVD1-214ENST00000469528 EVX2Q03828 476 aa15.18■□□□□ 0.02
GAPVD1-214ENST00000469528 ZNF792Q3KQV3 632 aa15.18■□□□□ 0.02
GAPVD1-214ENST00000469528 TRIM60Q495X7 471 aa15.18■□□□□ 0.02
GAPVD1-214ENST00000469528 SBK1Q52WX2 424 aa15.18■□□□□ 0.02
GAPVD1-214ENST00000469528 DIEXFQ68CQ4 756 aaKnown RBP15.18■□□□□ 0.02
GAPVD1-214ENST00000469528 PRPF38AQ8NAV1 312 aaKnown RBP15.18■□□□□ 0.02
GAPVD1-214ENST00000469528 NUP133Q8WUM0 1156 aa15.18■□□□□ 0.02
GAPVD1-214ENST00000469528 BADQ92934 168 aa15.18■□□□□ 0.02
GAPVD1-214ENST00000469528 FERMT2Q96AC1 680 aa15.18■□□□□ 0.02
GAPVD1-214ENST00000469528 DDX11Q96FC9 970 aa15.18■□□□□ 0.02
GAPVD1-214ENST00000469528 PHF24Q9UPV7 400 aa15.18■□□□□ 0.02
GAPVD1-214ENST00000469528 NAV1Q8NEY1 1877 aa15.17■□□□□ 0.02
GAPVD1-214ENST00000469528 ZBED4O75132 1171 aa15.17■□□□□ 0.02
GAPVD1-214ENST00000469528 GNAT2P19087 354 aa15.17■□□□□ 0.02
GAPVD1-214ENST00000469528 SMAD3P84022 425 aaKnown RBP15.17■□□□□ 0.02
GAPVD1-214ENST00000469528 TLE2Q04725 743 aa15.17■□□□□ 0.02
GAPVD1-214ENST00000469528 SHHQ15465 462 aa15.17■□□□□ 0.02
GAPVD1-214ENST00000469528 ZNF444Q8N0Y2 327 aaPredicted RBP15.17■□□□□ 0.02
GAPVD1-214ENST00000469528 PUS7LQ9H0K6 701 aaKnown RBP15.17■□□□□ 0.02
GAPVD1-214ENST00000469528 NYAP2Q9P242 653 aa15.17■□□□□ 0.02
GAPVD1-214ENST00000469528 FAM184BQ9ULE4 1060 aa15.17■□□□□ 0.02
GAPVD1-214ENST00000469528 ZNF236Q9UL36 1845 aa15.17■□□□□ 0.02
GAPVD1-214ENST00000469528 CYP2D7A0A087X1C5 515 aa15.16■□□□□ 0.02
GAPVD1-214ENST00000469528 PGK2P07205 417 aa15.16■□□□□ 0.02
GAPVD1-214ENST00000469528 ZFYP08048 801 aaPredicted RBP15.16■□□□□ 0.02
GAPVD1-214ENST00000469528 CLTBP09497 229 aa15.16■□□□□ 0.02
GAPVD1-214ENST00000469528 FAM47AQ5JRC9 791 aa15.16■□□□□ 0.02
GAPVD1-214ENST00000469528 FAM83BQ5T0W9 1011 aa15.16■□□□□ 0.02
GAPVD1-214ENST00000469528 TOX2Q96NM4 488 aa15.16■□□□□ 0.02
GAPVD1-214ENST00000469528 STRBPQ96SI9 672 aaKnown RBP15.16■□□□□ 0.02
GAPVD1-214ENST00000469528 SLF1Q9BQI6 1058 aa15.16■□□□□ 0.02
GAPVD1-214ENST00000469528 TEX13BQ9BXU2 312 aa15.16■□□□□ 0.02
GAPVD1-214ENST00000469528 SPC25Q9HBM1 224 aa15.16■□□□□ 0.02
GAPVD1-214ENST00000469528 ECHDC1Q9NTX5 307 aa15.16■□□□□ 0.02
GAPVD1-214ENST00000469528 MOXD2PA6NHM9 499 aa15.15■□□□□ 0.02
GAPVD1-214ENST00000469528 DCDC2CA8MYV0 355 aa15.15■□□□□ 0.02
GAPVD1-214ENST00000469528 MINDY4BA8MYZ0 360 aa15.15■□□□□ 0.02
GAPVD1-214ENST00000469528 F5H6K3 240 aa15.15■□□□□ 0.02
GAPVD1-214ENST00000469528 FDX1P10109 184 aa15.15■□□□□ 0.02
GAPVD1-214ENST00000469528 RAG1P15918 1043 aa15.15■□□□□ 0.02
GAPVD1-214ENST00000469528 KLRC3Q07444 240 aa15.15■□□□□ 0.02
GAPVD1-214ENST00000469528 CLEC10AQ8IUN9 316 aa15.15■□□□□ 0.02
GAPVD1-214ENST00000469528 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.15■□□□□ 0.02
GAPVD1-214ENST00000469528 FAM161BQ96MY7 647 aa15.15■□□□□ 0.02
GAPVD1-214ENST00000469528 SEMA6BQ9H3T3 888 aa15.15■□□□□ 0.02
GAPVD1-214ENST00000469528 PDLIM7Q9NR12 457 aa15.15■□□□□ 0.02
GAPVD1-214ENST00000469528 FBXO28Q9NVF7 368 aa15.15■□□□□ 0.02
GAPVD1-214ENST00000469528 FBXO40Q9UH90 709 aa15.15■□□□□ 0.02
GAPVD1-214ENST00000469528 ZNF214Q9UL59 606 aaPredicted RBP15.15■□□□□ 0.02
GAPVD1-214ENST00000469528 SYNPO2Q9UMS6 1093 aa15.15■□□□□ 0.02
GAPVD1-214ENST00000469528 SYNGAP1Q96PV0 1343 aa15.15■□□□□ 0.02
GAPVD1-214ENST00000469528 ZNFX1Q9P2E3 1918 aaKnown RBP15.14■□□□□ 0.01
GAPVD1-214ENST00000469528 TRIM43BA6NCK2 446 aa15.14■□□□□ 0.01
GAPVD1-214ENST00000469528 ATP2A1O14983 1001 aa15.14■□□□□ 0.01
GAPVD1-214ENST00000469528 PGK1P00558 417 aa15.14■□□□□ 0.01
GAPVD1-214ENST00000469528 APPP05067 770 aa15.14■□□□□ 0.01
GAPVD1-214ENST00000469528 ZNF865P0CJ78 1059 aaPredicted RBP15.14■□□□□ 0.01
GAPVD1-214ENST00000469528 SLFNL1Q499Z3 407 aa15.14■□□□□ 0.01
GAPVD1-214ENST00000469528 SNRNP48Q6IEG0 339 aaKnown RBP15.14■□□□□ 0.01
GAPVD1-214ENST00000469528 CCDC174Q6PII3 467 aa15.14■□□□□ 0.01
GAPVD1-214ENST00000469528 MAMDC4Q6UXC1 1216 aa15.14■□□□□ 0.01
GAPVD1-214ENST00000469528 ZNF467Q7Z7K2 595 aaPredicted RBP15.14■□□□□ 0.01
GAPVD1-214ENST00000469528 PCSK9Q8NBP7 692 aaKnown RBP15.14■□□□□ 0.01
GAPVD1-214ENST00000469528 TRIM43Q96BQ3 446 aaPredicted RBP15.14■□□□□ 0.01
GAPVD1-214ENST00000469528 GUCD1Q96NT3 240 aa15.14■□□□□ 0.01
GAPVD1-214ENST00000469528 TMEM39AQ9NV64 488 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms