RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 HERC5Q9UII4 1024 aaKnown RBP10.72□□□□□ -0.69
SMC1A-205ENST00000469129 SYNPO2Q9UMS6 1093 aa10.72□□□□□ -0.69
SMC1A-205ENST00000469129 BCS1LQ9Y276 419 aa10.72□□□□□ -0.69
SMC1A-205ENST00000469129 RAD17O75943 681 aa10.71□□□□□ -0.69
SMC1A-205ENST00000469129 SNHG28P0DPA3 235 aa10.71□□□□□ -0.69
SMC1A-205ENST00000469129 PDHBP11177 359 aa10.71□□□□□ -0.69
SMC1A-205ENST00000469129 TCP10Q12799 353 aa10.71□□□□□ -0.69
SMC1A-205ENST00000469129 NR5A1Q13285 461 aa10.71□□□□□ -0.69
SMC1A-205ENST00000469129 SPDYE2Q495Y8 402 aa10.71□□□□□ -0.69
SMC1A-205ENST00000469129 CERKLQ49MI3 558 aaPredicted RBP10.71□□□□□ -0.69
SMC1A-205ENST00000469129 PPP1R18Q6NYC8 613 aa10.71□□□□□ -0.69
SMC1A-205ENST00000469129 TATDN1Q6P1N9 297 aa10.71□□□□□ -0.69
SMC1A-205ENST00000469129 METTL16Q86W50 562 aaKnown RBP10.71□□□□□ -0.69
SMC1A-205ENST00000469129 BLIDQ8IZY5 108 aa10.71□□□□□ -0.69
SMC1A-205ENST00000469129 STAG2Q8N3U4 1231 aa10.71□□□□□ -0.69
SMC1A-205ENST00000469129 DCAF4Q8WV16 495 aa10.71□□□□□ -0.69
SMC1A-205ENST00000469129 TIGD1Q96MW7 591 aa10.71□□□□□ -0.69
SMC1A-205ENST00000469129 FUCA2Q9BTY2 467 aa10.71□□□□□ -0.69
SMC1A-205ENST00000469129 GOLPH3LQ9H4A5 285 aa10.71□□□□□ -0.69
SMC1A-205ENST00000469129 KANSL2Q9H9L4 492 aa10.71□□□□□ -0.69
SMC1A-205ENST00000469129 BARHL2Q9NY43 387 aa10.71□□□□□ -0.69
SMC1A-205ENST00000469129 FAM13BQ9NYF5 915 aa10.71□□□□□ -0.69
SMC1A-205ENST00000469129 NYAP2Q9P242 653 aa10.71□□□□□ -0.69
SMC1A-205ENST00000469129 PCDHA4Q9UN74 947 aa10.71□□□□□ -0.69
SMC1A-205ENST00000469129 FAM237AA0A1B0GTK4 181 aa10.7□□□□□ -0.7
SMC1A-205ENST00000469129 hCG_1642624A0A1W2PR95 340 aa10.7□□□□□ -0.7
SMC1A-205ENST00000469129 ESYT2A0FGR8 921 aa10.7□□□□□ -0.7
SMC1A-205ENST00000469129 DDTLA6NHG4 134 aaPredicted RBP10.7□□□□□ -0.7
SMC1A-205ENST00000469129 GNA11P29992 359 aa10.7□□□□□ -0.7
SMC1A-205ENST00000469129 TNNI2P48788 182 aa10.7□□□□□ -0.7
SMC1A-205ENST00000469129 CACNB3P54284 484 aa10.7□□□□□ -0.7
SMC1A-205ENST00000469129 TYRO3Q06418 890 aa10.7□□□□□ -0.7
SMC1A-205ENST00000469129 ZRSR1Q15695 479 aaKnown RBP10.7□□□□□ -0.7
SMC1A-205ENST00000469129 STX1AQ16623 288 aa10.7□□□□□ -0.7
SMC1A-205ENST00000469129 AXDND1Q5T1B0 1012 aaPredicted RBP10.7□□□□□ -0.7
SMC1A-205ENST00000469129 RESP18Q5W5W9 173 aa10.7□□□□□ -0.7
SMC1A-205ENST00000469129 HEATR3Q7Z4Q2 680 aa10.7□□□□□ -0.7
SMC1A-205ENST00000469129 FAM83AQ86UY5 434 aa10.7□□□□□ -0.7
SMC1A-205ENST00000469129 FMR1NBQ8N0W7 255 aaPredicted RBP10.7□□□□□ -0.7
SMC1A-205ENST00000469129 LRRC47Q8N1G4 583 aaKnown RBP10.7□□□□□ -0.7
SMC1A-205ENST00000469129 ZNF579Q8NAF0 562 aaKnown RBP10.7□□□□□ -0.7
SMC1A-205ENST00000469129 ENGASEQ8NFI3 743 aa10.7□□□□□ -0.7
SMC1A-205ENST00000469129 OXER1Q8TDS5 423 aa10.7□□□□□ -0.7
SMC1A-205ENST00000469129 FAM151AQ8WW52 585 aa10.7□□□□□ -0.7
SMC1A-205ENST00000469129 TNFRSF25Q93038 417 aa10.7□□□□□ -0.7
SMC1A-205ENST00000469129 FERMT2Q96AC1 680 aa10.7□□□□□ -0.7
SMC1A-205ENST00000469129 CCDC34Q96HJ3 373 aa10.7□□□□□ -0.7
SMC1A-205ENST00000469129 CSRNP1Q96S65 589 aa10.7□□□□□ -0.7
SMC1A-205ENST00000469129 DNAJC18Q9H819 358 aa10.7□□□□□ -0.7
SMC1A-205ENST00000469129 C6orf50Q9HD87 102 aa10.7□□□□□ -0.7
SMC1A-205ENST00000469129 CABP5Q9NP86 173 aa10.7□□□□□ -0.7
SMC1A-205ENST00000469129 ZNF70Q9UC06 446 aaPredicted RBP10.7□□□□□ -0.7
SMC1A-205ENST00000469129 CLIP2Q9UDT6 1046 aa10.7□□□□□ -0.7
SMC1A-205ENST00000469129 HOOK1Q9UJC3 728 aaKnown RBP10.7□□□□□ -0.7
SMC1A-205ENST00000469129 MTMR7Q9Y216 660 aa10.7□□□□□ -0.7
SMC1A-205ENST00000469129 MYH7BA7E2Y1 1941 aa10.69□□□□□ -0.7
SMC1A-205ENST00000469129 CCDC194A0A1B0GVG4 234 aa10.69□□□□□ -0.7
SMC1A-205ENST00000469129 STXBP3O00186 592 aa10.69□□□□□ -0.7
SMC1A-205ENST00000469129 PFKFB1P16118 471 aa10.69□□□□□ -0.7
SMC1A-205ENST00000469129 NAPAP54920 295 aa10.69□□□□□ -0.7
SMC1A-205ENST00000469129 ICA1Q05084 483 aa10.69□□□□□ -0.7
SMC1A-205ENST00000469129 ZNF543Q08ER8 600 aa10.69□□□□□ -0.7
SMC1A-205ENST00000469129 ORC2Q13416 577 aaPredicted RBP10.69□□□□□ -0.7
SMC1A-205ENST00000469129 SNW1Q13573 536 aaKnown RBP10.69□□□□□ -0.7
SMC1A-205ENST00000469129 TNFAIP1Q13829 316 aa10.69□□□□□ -0.7
SMC1A-205ENST00000469129 CAMK4Q16566 473 aa10.69□□□□□ -0.7
SMC1A-205ENST00000469129 CCDC96Q2M329 555 aa10.69□□□□□ -0.7
SMC1A-205ENST00000469129 ABCB5Q2M3G0 1257 aa10.69□□□□□ -0.7
SMC1A-205ENST00000469129 TTC38Q5R3I4 469 aa10.69□□□□□ -0.7
SMC1A-205ENST00000469129 RBM26Q5T8P6 1007 aaKnown RBP10.69□□□□□ -0.7
SMC1A-205ENST00000469129 WWC2Q6AWC2 1192 aa10.69□□□□□ -0.7
SMC1A-205ENST00000469129 KRT25Q7Z3Z0 450 aa10.69□□□□□ -0.7
SMC1A-205ENST00000469129 FAM200AQ8TCP9 573 aa10.69□□□□□ -0.7
SMC1A-205ENST00000469129 GPKOWQ92917 476 aaPredicted RBP eCLIP10.69□□□□□ -0.7
SMC1A-205ENST00000469129 MKL1Q969V6 931 aa10.69□□□□□ -0.7
SMC1A-205ENST00000469129 PRMT6Q96LA8 375 aaPredicted RBP10.69□□□□□ -0.7
SMC1A-205ENST00000469129 PANK2Q9BZ23 570 aa10.69□□□□□ -0.7
SMC1A-205ENST00000469129 RIOX1Q9H6W3 641 aa10.69□□□□□ -0.7
SMC1A-205ENST00000469129 PCDHAC2Q9Y5I4 1007 aa10.69□□□□□ -0.7
SMC1A-205ENST00000469129 A0A1B0GVL5 298 aa10.68□□□□□ -0.7
SMC1A-205ENST00000469129 USP17L5A8MUK1 530 aa10.68□□□□□ -0.7
SMC1A-205ENST00000469129 NFKBIEO00221 500 aa10.68□□□□□ -0.7
SMC1A-205ENST00000469129 CYTH3O43739 400 aa10.68□□□□□ -0.7
SMC1A-205ENST00000469129 GOLGA8HP0CJ92 632 aa10.68□□□□□ -0.7
SMC1A-205ENST00000469129 PTPREP23469 700 aa10.68□□□□□ -0.7
SMC1A-205ENST00000469129 MARCKSP29966 332 aaPredicted RBP10.68□□□□□ -0.7
SMC1A-205ENST00000469129 SYKP43405 635 aa10.68□□□□□ -0.7
SMC1A-205ENST00000469129 TOB1P50616 345 aaPredicted RBP10.68□□□□□ -0.7
SMC1A-205ENST00000469129 NDUFA8P51970 172 aa10.68□□□□□ -0.7
SMC1A-205ENST00000469129 EIF6P56537 245 aaKnown RBP10.68□□□□□ -0.7
SMC1A-205ENST00000469129 ATP2B2Q01814 1243 aa10.68□□□□□ -0.7
SMC1A-205ENST00000469129 CXCL9Q07325 125 aa10.68□□□□□ -0.7
SMC1A-205ENST00000469129 NPY5RQ15761 445 aa10.68□□□□□ -0.7
SMC1A-205ENST00000469129 USP17L2Q6R6M4 530 aa10.68□□□□□ -0.7
SMC1A-205ENST00000469129 SH3BP5LQ7L8J4 393 aa10.68□□□□□ -0.7
SMC1A-205ENST00000469129 ZFPM1Q8IX07 1006 aa10.68□□□□□ -0.7
SMC1A-205ENST00000469129 PIBF1Q8WXW3 757 aa10.68□□□□□ -0.7
SMC1A-205ENST00000469129 SHISA4Q96DD7 197 aa10.68□□□□□ -0.7
SMC1A-205ENST00000469129 TRIM44Q96DX7 344 aaPredicted RBP10.68□□□□□ -0.7
SMC1A-205ENST00000469129 SDF4Q9BRK5 362 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms