RNA–Protein interactions for RNA: ENST00000468958.1

ABCF1-204, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-204ENST00000468958 FLOT1O75955 427 aa14.92□□□□□ -0.02
ABCF1-204ENST00000468958 GJB1P08034 283 aa14.92□□□□□ -0.02
ABCF1-204ENST00000468958 HSPD1P10809 573 aaKnown RBP14.92□□□□□ -0.02
ABCF1-204ENST00000468958 GSPT1P15170 499 aaKnown RBP14.92□□□□□ -0.02
ABCF1-204ENST00000468958 FAM83BQ5T0W9 1011 aa14.92□□□□□ -0.02
ABCF1-204ENST00000468958 UBE2Q1Q7Z7E8 422 aa14.92□□□□□ -0.02
ABCF1-204ENST00000468958 U2AF1L4Q8WU68 220 aaKnown RBP14.92□□□□□ -0.02
ABCF1-204ENST00000468958 NUDT12Q9BQG2 462 aa14.92□□□□□ -0.02
ABCF1-204ENST00000468958 NACAP1Q9BZK3 213 aa14.92□□□□□ -0.02
ABCF1-204ENST00000468958 SH2D4AQ9H788 454 aa14.92□□□□□ -0.02
ABCF1-204ENST00000468958 PAK6Q9NQU5 681 aaPredicted RBP14.92□□□□□ -0.02
ABCF1-204ENST00000468958 FLRT1Q9NZU1 646 aa14.92□□□□□ -0.02
ABCF1-204ENST00000468958 ADAMTS5Q9UNA0 930 aa14.92□□□□□ -0.02
ABCF1-204ENST00000468958 NDUFB10O96000 172 aa14.91□□□□□ -0.02
ABCF1-204ENST00000468958 FGAP02671 866 aa14.91□□□□□ -0.02
ABCF1-204ENST00000468958 HMGCRP04035 888 aa14.91□□□□□ -0.02
ABCF1-204ENST00000468958 PTPREP23469 700 aa14.91□□□□□ -0.02
ABCF1-204ENST00000468958 TFAP4Q01664 338 aa14.91□□□□□ -0.02
ABCF1-204ENST00000468958 TMEM132BQ14DG7 1078 aa14.91□□□□□ -0.02
ABCF1-204ENST00000468958 ALX1Q15699 326 aa14.91□□□□□ -0.02
ABCF1-204ENST00000468958 RASGRP2Q7LDG7 609 aa14.91□□□□□ -0.02
ABCF1-204ENST00000468958 ZNF444Q8N0Y2 327 aaPredicted RBP14.91□□□□□ -0.02
ABCF1-204ENST00000468958 LRRC47Q8N1G4 583 aaKnown RBP14.91□□□□□ -0.02
ABCF1-204ENST00000468958 REPS2Q8NFH8 660 aa14.91□□□□□ -0.02
ABCF1-204ENST00000468958 NEDD1Q8NHV4 660 aa14.91□□□□□ -0.02
ABCF1-204ENST00000468958 NPLOC4Q8TAT6 608 aa14.91□□□□□ -0.02
ABCF1-204ENST00000468958 RUFY2Q8WXA3 655 aa14.91□□□□□ -0.02
ABCF1-204ENST00000468958 SPATC1LQ9H0A9 340 aa14.91□□□□□ -0.02
ABCF1-204ENST00000468958 IL17RBQ9NRM6 502 aa14.91□□□□□ -0.02
ABCF1-204ENST00000468958 MTMR4Q9NYA4 1195 aa14.91□□□□□ -0.02
ABCF1-204ENST00000468958 CLIP2Q9UDT6 1046 aa14.91□□□□□ -0.02
ABCF1-204ENST00000468958 ANAPC4Q9UJX5 808 aa14.91□□□□□ -0.02
ABCF1-204ENST00000468958 CCDC171Q6TFL3 1326 aa14.91□□□□□ -0.02
ABCF1-204ENST00000468958 LCTP09848 1927 aa14.9□□□□□ -0.02
ABCF1-204ENST00000468958 F5H6K3 240 aa14.9□□□□□ -0.02
ABCF1-204ENST00000468958 RAD21O60216 631 aa14.9□□□□□ -0.02
ABCF1-204ENST00000468958 NMT2O60551 498 aa14.9□□□□□ -0.02
ABCF1-204ENST00000468958 SGPL1O95470 568 aa14.9□□□□□ -0.02
ABCF1-204ENST00000468958 KLRC3Q07444 240 aa14.9□□□□□ -0.02
ABCF1-204ENST00000468958 GRB14Q14449 540 aa14.9□□□□□ -0.02
ABCF1-204ENST00000468958 MAP3K21Q5TCX8 1036 aa14.9□□□□□ -0.02
ABCF1-204ENST00000468958 WDR78Q5VTH9 848 aa14.9□□□□□ -0.02
ABCF1-204ENST00000468958 CASC1Q6TDU7 716 aa14.9□□□□□ -0.02
ABCF1-204ENST00000468958 SOCS4Q8WXH5 440 aa14.9□□□□□ -0.02
ABCF1-204ENST00000468958 MKL1Q969V6 931 aa14.9□□□□□ -0.02
ABCF1-204ENST00000468958 DEFB118Q96PH6 123 aa14.9□□□□□ -0.02
ABCF1-204ENST00000468958 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.9□□□□□ -0.021e-8■■□□□ 13
ABCF1-204ENST00000468958 GOPCQ9HD26 462 aa14.9□□□□□ -0.02
ABCF1-204ENST00000468958 HOXC10Q9NYD6 342 aa14.9□□□□□ -0.02
ABCF1-204ENST00000468958 RAD50Q92878 1312 aa14.9□□□□□ -0.02
ABCF1-204ENST00000468958 IGHA2P01877 340 aa14.89□□□□□ -0.03
ABCF1-204ENST00000468958 FGRP09769 529 aa14.89□□□□□ -0.03
ABCF1-204ENST00000468958 XRCC5P13010 732 aaKnown RBP14.89□□□□□ -0.03
ABCF1-204ENST00000468958 ERCC3P19447 782 aa14.89□□□□□ -0.03
ABCF1-204ENST00000468958 PDE4BQ07343 736 aa14.89□□□□□ -0.03
ABCF1-204ENST00000468958 CACNB2Q08289 660 aaPredicted RBP14.89□□□□□ -0.03
ABCF1-204ENST00000468958 MAP2K5Q13163 448 aa14.89□□□□□ -0.03
ABCF1-204ENST00000468958 BMP2KLQ5H9B9 411 aa14.89□□□□□ -0.03
ABCF1-204ENST00000468958 APBA2Q99767 749 aa14.89□□□□□ -0.03
ABCF1-204ENST00000468958 CRISPLD2Q9H0B8 497 aa14.89□□□□□ -0.03
ABCF1-204ENST00000468958 PPP1R9AQ9ULJ8 1098 aa14.89□□□□□ -0.03
ABCF1-204ENST00000468958 ZMYM6O95789 1325 aa14.89□□□□□ -0.03
ABCF1-204ENST00000468958 MCM3APO60318 1980 aa14.88□□□□□ -0.03
ABCF1-204ENST00000468958 SLC15A5A6NIM6 579 aa14.88□□□□□ -0.03
ABCF1-204ENST00000468958 TSPY3P0CV98 308 aa14.88□□□□□ -0.03
ABCF1-204ENST00000468958 TSPY8P0CW00 308 aa14.88□□□□□ -0.03
ABCF1-204ENST00000468958 CCND3P30281 292 aaPredicted RBP14.88□□□□□ -0.03
ABCF1-204ENST00000468958 RGS2P41220 211 aa14.88□□□□□ -0.03
ABCF1-204ENST00000468958 MNX1P50219 401 aaPredicted RBP14.88□□□□□ -0.03
ABCF1-204ENST00000468958 HAND2P61296 217 aa14.88□□□□□ -0.03
ABCF1-204ENST00000468958 CCNA1P78396 465 aa14.88□□□□□ -0.03
ABCF1-204ENST00000468958 CWC27Q6UX04 472 aaKnown RBP14.88□□□□□ -0.03
ABCF1-204ENST00000468958 TBC1D10CQ8IV04 446 aa14.88□□□□□ -0.03
ABCF1-204ENST00000468958 CHMP4CQ96CF2 233 aa14.88□□□□□ -0.03
ABCF1-204ENST00000468958 ZNF214Q9UL59 606 aaPredicted RBP14.88□□□□□ -0.03
ABCF1-204ENST00000468958 VWA5AO00534 786 aa14.87□□□□□ -0.03
ABCF1-204ENST00000468958 COBLO75128 1261 aa14.87□□□□□ -0.03
ABCF1-204ENST00000468958 TTLL1O95922 423 aa14.87□□□□□ -0.03
ABCF1-204ENST00000468958 PRKAR2AP13861 404 aaKnown RBP14.87□□□□□ -0.03
ABCF1-204ENST00000468958 ZKSCAN1P17029 563 aaPredicted RBP14.87□□□□□ -0.03
ABCF1-204ENST00000468958 NOVP48745 357 aa14.87□□□□□ -0.03
ABCF1-204ENST00000468958 PLS1Q14651 629 aa14.87□□□□□ -0.03
ABCF1-204ENST00000468958 SKAP1Q86WV1 359 aa14.87□□□□□ -0.03
ABCF1-204ENST00000468958 CCAR1Q8IX12 1150 aaKnown RBP14.87□□□□□ -0.03
ABCF1-204ENST00000468958 MB21D1Q8N884 522 aa14.87□□□□□ -0.03
ABCF1-204ENST00000468958 SHCBP1Q8NEM2 672 aa14.87□□□□□ -0.03
ABCF1-204ENST00000468958 DIS3LQ8TF46 1054 aaKnown RBP14.87□□□□□ -0.03
ABCF1-204ENST00000468958 ZNF287Q9HBT7 754 aa14.87□□□□□ -0.03
ABCF1-204ENST00000468958 RPTORQ8N122 1335 aa14.87□□□□□ -0.03
ABCF1-204ENST00000468958 ORC4O43929 436 aa14.86□□□□□ -0.03
ABCF1-204ENST00000468958 HOXC6P09630 235 aa14.86□□□□□ -0.03
ABCF1-204ENST00000468958 ADORA2AP29274 412 aa14.86□□□□□ -0.03
ABCF1-204ENST00000468958 PRPF38BQ5VTL8 546 aaKnown RBP14.86□□□□□ -0.03
ABCF1-204ENST00000468958 NCAPG2Q86XI2 1143 aa14.86□□□□□ -0.03
ABCF1-204ENST00000468958 GMCL1P1Q8NEA9 526 aa14.86□□□□□ -0.03
ABCF1-204ENST00000468958 TRPV1Q8NER1 839 aa14.86□□□□□ -0.03
ABCF1-204ENST00000468958 SLF1Q9BQI6 1058 aa14.86□□□□□ -0.03
ABCF1-204ENST00000468958 HMX1Q9NP08 348 aaPredicted RBP14.86□□□□□ -0.03
ABCF1-204ENST00000468958 RIPK3Q9Y572 518 aa14.86□□□□□ -0.03
ABCF1-204ENST00000468958 TSPY2A6NKD2 308 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms