RNA–Protein interactions for RNA: ENST00000468459.5

COL16A1-208, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 620 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-208ENST00000468459 RPAP3Q9H6T3 665 aaPredicted RBP17.48■□□□□ 0.39
COL16A1-208ENST00000468459 ANO2Q9NQ90 1003 aa17.48■□□□□ 0.39
COL16A1-208ENST00000468459 BTBD7Q9P203 1132 aa17.48■□□□□ 0.39
COL16A1-208ENST00000468459 ANAPC4Q9UJX5 808 aa17.48■□□□□ 0.39
COL16A1-208ENST00000468459 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.48■□□□□ 0.39
COL16A1-208ENST00000468459 MPHOSPH10O00566 681 aaKnown RBP17.47■□□□□ 0.39
COL16A1-208ENST00000468459 PRKAR2AP13861 404 aaKnown RBP17.47■□□□□ 0.39
COL16A1-208ENST00000468459 KIAA1755Q5JYT7 1200 aa17.47■□□□□ 0.39
COL16A1-208ENST00000468459 CHRDL2Q6WN34 429 aa17.47■□□□□ 0.39
COL16A1-208ENST00000468459 TMEM179Q6ZVK1 233 aa17.47■□□□□ 0.39
COL16A1-208ENST00000468459 OGDHLQ9ULD0 1010 aa17.47■□□□□ 0.39
COL16A1-208ENST00000468459 TAF6LQ9Y6J9 622 aa17.47■□□□□ 0.39
COL16A1-208ENST00000468459 TRIOBPQ9H2D6 2365 aa17.47■□□□□ 0.39
COL16A1-208ENST00000468459 LAMA4Q16363 1823 aa17.47■□□□□ 0.39
COL16A1-208ENST00000468459 RGS2P41220 211 aa17.46■□□□□ 0.39
COL16A1-208ENST00000468459 CCL14Q16627 93 aa17.46■□□□□ 0.39
COL16A1-208ENST00000468459 MKNK2Q9HBH9 465 aa17.46■□□□□ 0.39
COL16A1-208ENST00000468459 RBM27Q9P2N5 1060 aaKnown RBP17.46■□□□□ 0.39
COL16A1-208ENST00000468459 RBM8AQ9Y5S9 174 aaKnown RBP17.46■□□□□ 0.39
COL16A1-208ENST00000468459 NEDD4P46934 1319 aa17.46■□□□□ 0.38
COL16A1-208ENST00000468459 PLXNB2O15031 1838 aa17.45■□□□□ 0.38
COL16A1-208ENST00000468459 IGHA2P01877 340 aa17.45■□□□□ 0.38
COL16A1-208ENST00000468459 CCNA1P78396 465 aa17.45■□□□□ 0.38
COL16A1-208ENST00000468459 CACNB2Q08289 660 aaPredicted RBP17.45■□□□□ 0.38
COL16A1-208ENST00000468459 MAP2K5Q13163 448 aa17.45■□□□□ 0.38
COL16A1-208ENST00000468459 KIAA1211Q6ZU35 1233 aa17.45■□□□□ 0.38
COL16A1-208ENST00000468459 NECAB2Q7Z6G3 386 aa17.45■□□□□ 0.38
COL16A1-208ENST00000468459 TRMT44Q8IYL2 757 aaKnown RBP17.45■□□□□ 0.38
COL16A1-208ENST00000468459 MAP4K1Q92918 833 aa17.45■□□□□ 0.38
COL16A1-208ENST00000468459 APBA2Q99767 749 aa17.45■□□□□ 0.38
COL16A1-208ENST00000468459 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.45■□□□□ 0.38
COL16A1-208ENST00000468459 NR2E3Q9Y5X4 410 aa17.45■□□□□ 0.38
COL16A1-208ENST00000468459 U3KPZ7 1027 aaPredicted RBP17.45■□□□□ 0.38
COL16A1-208ENST00000468459 ZNF213O14771 459 aa17.44■□□□□ 0.38
COL16A1-208ENST00000468459 SLC3A2P08195 630 aaKnown RBP17.44■□□□□ 0.38
COL16A1-208ENST00000468459 HOXC6P09630 235 aa17.44■□□□□ 0.38
COL16A1-208ENST00000468459 ZKSCAN1P17029 563 aaPredicted RBP17.44■□□□□ 0.38
COL16A1-208ENST00000468459 PTPREP23469 700 aa17.44■□□□□ 0.38
COL16A1-208ENST00000468459 PDE4BQ07343 736 aa17.44■□□□□ 0.38
COL16A1-208ENST00000468459 COG2Q14746 738 aa17.44■□□□□ 0.38
COL16A1-208ENST00000468459 FAM47AQ5JRC9 791 aa17.44■□□□□ 0.38
COL16A1-208ENST00000468459 LHX8Q68G74 356 aa17.44■□□□□ 0.38
COL16A1-208ENST00000468459 CCAR1Q8IX12 1150 aaKnown RBP17.44■□□□□ 0.38
COL16A1-208ENST00000468459 STAG1Q8WVM7 1258 aa17.44■□□□□ 0.38
COL16A1-208ENST00000468459 CCDC17Q96LX7 622 aa17.44■□□□□ 0.38
COL16A1-208ENST00000468459 CTNNA3Q9UI47 895 aa17.44■□□□□ 0.38
COL16A1-208ENST00000468459 TMX2Q9Y320 296 aa17.44■□□□□ 0.38
COL16A1-208ENST00000468459 MYH8P13535 1937 aa17.44■□□□□ 0.38
COL16A1-208ENST00000468459 SLC15A5A6NIM6 579 aa17.43■□□□□ 0.38
COL16A1-208ENST00000468459 CYP21A2P08686 494 aa17.43■□□□□ 0.38
COL16A1-208ENST00000468459 GRB14Q14449 540 aa17.43■□□□□ 0.38
COL16A1-208ENST00000468459 IMMTQ16891 758 aaKnown RBP17.43■□□□□ 0.38
COL16A1-208ENST00000468459 RRP12Q5JTH9 1297 aaKnown RBP17.43■□□□□ 0.38
COL16A1-208ENST00000468459 TOMM22Q9NS69 142 aa17.43■□□□□ 0.38
COL16A1-208ENST00000468459 HOXC10Q9NYD6 342 aa17.43■□□□□ 0.38
COL16A1-208ENST00000468459 FLRT1Q9NZU1 646 aa17.43■□□□□ 0.38
COL16A1-208ENST00000468459 ORC4O43929 436 aa17.42■□□□□ 0.38
COL16A1-208ENST00000468459 EVI5O60447 810 aa17.42■□□□□ 0.38
COL16A1-208ENST00000468459 FGRP09769 529 aa17.42■□□□□ 0.38
COL16A1-208ENST00000468459 CCND3P30281 292 aaPredicted RBP17.42■□□□□ 0.38
COL16A1-208ENST00000468459 AKNAD1Q5T1N1 836 aa17.42■□□□□ 0.38
COL16A1-208ENST00000468459 LPAR1Q92633 364 aa17.42■□□□□ 0.38
COL16A1-208ENST00000468459 VCPKMTQ9H867 229 aa17.42■□□□□ 0.38
COL16A1-208ENST00000468459 GREB1LQ9C091 1923 aaPredicted RBP17.42■□□□□ 0.38
COL16A1-208ENST00000468459 COL6A1P12109 1028 aa17.41■□□□□ 0.38
COL16A1-208ENST00000468459 DSG3P32926 999 aa17.41■□□□□ 0.38
COL16A1-208ENST00000468459 ICA1Q05084 483 aa17.41■□□□□ 0.38
COL16A1-208ENST00000468459 STOX1Q6ZVD7 989 aa17.41■□□□□ 0.38
COL16A1-208ENST00000468459 ZNF444Q8N0Y2 327 aaPredicted RBP17.41■□□□□ 0.38
COL16A1-208ENST00000468459 NPLOC4Q8TAT6 608 aa17.41■□□□□ 0.38
COL16A1-208ENST00000468459 MOV10L1Q9BXT6 1211 aaKnown RBP17.41■□□□□ 0.38
COL16A1-208ENST00000468459 ZNF287Q9HBT7 754 aa17.41■□□□□ 0.38
COL16A1-208ENST00000468459 PLIN4Q96Q06 1357 aa17.4■□□□□ 0.38
COL16A1-208ENST00000468459 IGKV6D-41A0A0C4DH26 115 aa17.4■□□□□ 0.38
COL16A1-208ENST00000468459 SLC27A2O14975 620 aa17.4■□□□□ 0.38
COL16A1-208ENST00000468459 RANBP6O60518 1105 aaKnown RBP17.4■□□□□ 0.38
COL16A1-208ENST00000468459 NMT2O60551 498 aa17.4■□□□□ 0.38
COL16A1-208ENST00000468459 TSPY3P0CV98 308 aa17.4■□□□□ 0.38
COL16A1-208ENST00000468459 TSPY8P0CW00 308 aa17.4■□□□□ 0.38
COL16A1-208ENST00000468459 TFAP4Q01664 338 aa17.4■□□□□ 0.38
COL16A1-208ENST00000468459 CREB3L3Q68CJ9 461 aa17.4■□□□□ 0.38
COL16A1-208ENST00000468459 MFSD6Q6ZSS7 791 aa17.4■□□□□ 0.38
COL16A1-208ENST00000468459 SPATC1LQ9H0A9 340 aa17.4■□□□□ 0.38
COL16A1-208ENST00000468459 C11orf49Q9H6J7 331 aa17.4■□□□□ 0.38
COL16A1-208ENST00000468459 ADAMTS5Q9UNA0 930 aa17.4■□□□□ 0.38
COL16A1-208ENST00000468459 PFASO15067 1338 aa17.4■□□□□ 0.38
COL16A1-208ENST00000468459 TSPY2A6NKD2 308 aa17.39■□□□□ 0.37
COL16A1-208ENST00000468459 EEF2P13639 858 aaKnown RBP17.39■□□□□ 0.37
COL16A1-208ENST00000468459 ATP2B2Q01814 1243 aa17.39■□□□□ 0.37
COL16A1-208ENST00000468459 COL9A3Q14050 684 aaPredicted RBP17.39■□□□□ 0.37
COL16A1-208ENST00000468459 WDR78Q5VTH9 848 aa17.39■□□□□ 0.37
COL16A1-208ENST00000468459 SPICE1Q8N0Z3 855 aa17.39■□□□□ 0.37
COL16A1-208ENST00000468459 MB21D1Q8N884 522 aa17.39■□□□□ 0.37
COL16A1-208ENST00000468459 SHCBP1Q8NEM2 672 aa17.39■□□□□ 0.37
COL16A1-208ENST00000468459 NEDD1Q8NHV4 660 aa17.39■□□□□ 0.37
COL16A1-208ENST00000468459 CEP95Q96GE4 821 aa17.39■□□□□ 0.37
COL16A1-208ENST00000468459 TANGO6Q9C0B7 1094 aa17.39■□□□□ 0.37
COL16A1-208ENST00000468459 RNF41Q9H4P4 317 aaPredicted RBP17.39■□□□□ 0.37
COL16A1-208ENST00000468459 KANSL2Q9H9L4 492 aa17.39■□□□□ 0.37
COL16A1-208ENST00000468459 ARHGEF10LQ9HCE6 1279 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms