RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 FEM1BQ9UK73 627 aa23.58■■□□□ 1.37
NPHP4-206ENST00000468253 PPP1R9AQ9ULJ8 1098 aa23.58■■□□□ 1.37
NPHP4-206ENST00000468253 E7EWF7 191 aa23.57■■□□□ 1.36
NPHP4-206ENST00000468253 RAD21O60216 631 aa23.57■■□□□ 1.36
NPHP4-206ENST00000468253 CNMDO75829 334 aa23.57■■□□□ 1.36
NPHP4-206ENST00000468253 BMP3P12645 472 aa23.57■■□□□ 1.36
NPHP4-206ENST00000468253 MAPK4P31152 587 aa23.57■■□□□ 1.36
NPHP4-206ENST00000468253 NKX2-3Q8TAU0 364 aa23.57■■□□□ 1.36
NPHP4-206ENST00000468253 COA7Q96BR5 231 aa23.57■■□□□ 1.36
NPHP4-206ENST00000468253 ZSCAN10Q96SZ4 725 aaPredicted RBP23.57■■□□□ 1.36
NPHP4-206ENST00000468253 MYH8P13535 1937 aa23.57■■□□□ 1.36
NPHP4-206ENST00000468253 FDX1P10109 184 aa23.56■■□□□ 1.36
NPHP4-206ENST00000468253 NCOA7Q8NI08 942 aa23.56■■□□□ 1.36
NPHP4-206ENST00000468253 CHURC1Q8WUH1 139 aa23.56■■□□□ 1.36
NPHP4-206ENST00000468253 ABHD8Q96I13 439 aa23.56■■□□□ 1.36
NPHP4-206ENST00000468253 PAGR1Q9BTK6 254 aa23.56■■□□□ 1.36
NPHP4-206ENST00000468253 BTBD7Q9P203 1132 aa23.56■■□□□ 1.36
NPHP4-206ENST00000468253 TNPO2O14787 897 aaKnown RBP23.55■■□□□ 1.36
NPHP4-206ENST00000468253 EPB41L2O43491 1005 aaKnown RBP23.55■■□□□ 1.36
NPHP4-206ENST00000468253 MCCP23508 829 aa23.55■■□□□ 1.36
NPHP4-206ENST00000468253 SLC1A4P43007 532 aa23.55■■□□□ 1.36
NPHP4-206ENST00000468253 RNF20Q5VTR2 975 aa23.55■■□□□ 1.36
NPHP4-206ENST00000468253 DCAF4Q8WV16 495 aa23.55■■□□□ 1.36
NPHP4-206ENST00000468253 NUP88Q99567 741 aaPredicted RBP23.55■■□□□ 1.36
NPHP4-206ENST00000468253 SLF1Q9BQI6 1058 aa23.55■■□□□ 1.36
NPHP4-206ENST00000468253 FBXO28Q9NVF7 368 aa23.55■■□□□ 1.36
NPHP4-206ENST00000468253 VWA5AO00534 786 aa23.54■■□□□ 1.36
NPHP4-206ENST00000468253 SLC27A2O14975 620 aa23.54■■□□□ 1.36
NPHP4-206ENST00000468253 TSGA10IPQ3SY00 556 aa23.54■■□□□ 1.36
NPHP4-206ENST00000468253 CREB3L3Q68CJ9 461 aa23.54■■□□□ 1.36
NPHP4-206ENST00000468253 FAM160B2Q86V87 743 aa23.54■■□□□ 1.36
NPHP4-206ENST00000468253 ATG4CQ96DT6 458 aa23.54■■□□□ 1.36
NPHP4-206ENST00000468253 MTA3Q9BTC8 594 aa23.54■■□□□ 1.36
NPHP4-206ENST00000468253 GJD2Q9UKL4 321 aa23.54■■□□□ 1.36
NPHP4-206ENST00000468253 HPS5Q9UPZ3 1129 aa23.54■■□□□ 1.36
NPHP4-206ENST00000468253 IRF5Q13568 498 aa23.53■■□□□ 1.36
NPHP4-206ENST00000468253 RALYLQ86SE5 291 aaKnown RBP23.53■■□□□ 1.36
NPHP4-206ENST00000468253 CCAR1Q8IX12 1150 aaKnown RBP23.53■■□□□ 1.36
NPHP4-206ENST00000468253 SHCBP1Q8NEM2 672 aa23.53■■□□□ 1.36
NPHP4-206ENST00000468253 UBAC1Q9BSL1 405 aa23.53■■□□□ 1.36
NPHP4-206ENST00000468253 SPATC1LQ9H0A9 340 aa23.53■■□□□ 1.36
NPHP4-206ENST00000468253 PEX10O60683 326 aa23.52■■□□□ 1.36
NPHP4-206ENST00000468253 REC8O95072 547 aa23.52■■□□□ 1.36
NPHP4-206ENST00000468253 ENAHQ8N8S7 591 aaPredicted RBP23.52■■□□□ 1.36
NPHP4-206ENST00000468253 ZKSCAN3Q9BRR0 538 aa23.52■■□□□ 1.36
NPHP4-206ENST00000468253 TAF6LQ9Y6J9 622 aa23.52■■□□□ 1.36
NPHP4-206ENST00000468253 TMEM232C9JQI7 657 aa23.51■■□□□ 1.35
NPHP4-206ENST00000468253 ATP2A1O14983 1001 aa23.51■■□□□ 1.35
NPHP4-206ENST00000468253 STRNO43815 780 aa23.51■■□□□ 1.35
NPHP4-206ENST00000468253 ZBED4O75132 1171 aa23.51■■□□□ 1.35
NPHP4-206ENST00000468253 SLC25A27O95847 323 aa23.51■■□□□ 1.35
NPHP4-206ENST00000468253 SNHG28P0DPA3 235 aa23.51■■□□□ 1.35
NPHP4-206ENST00000468253 STAT2P52630 851 aa23.51■■□□□ 1.35
NPHP4-206ENST00000468253 TMEM132BQ14DG7 1078 aa23.51■■□□□ 1.35
NPHP4-206ENST00000468253 BTNL9Q6UXG8 535 aa23.51■■□□□ 1.35
NPHP4-206ENST00000468253 STOX1Q6ZVD7 989 aa23.51■■□□□ 1.35
NPHP4-206ENST00000468253 CYB5R4Q7L1T6 521 aa23.51■■□□□ 1.35
NPHP4-206ENST00000468253 PLEKHH3Q7Z736 793 aa23.51■■□□□ 1.35
NPHP4-206ENST00000468253 NBPF11Q86T75 865 aa23.51■■□□□ 1.35
NPHP4-206ENST00000468253 REPS2Q8NFH8 660 aa23.51■■□□□ 1.35
NPHP4-206ENST00000468253 PORCNQ9H237 461 aa23.51■■□□□ 1.35
NPHP4-206ENST00000468253 MROH8Q9H579 483 aa23.51■■□□□ 1.35
NPHP4-206ENST00000468253 COPB2P35606 906 aa23.5■■□□□ 1.35
NPHP4-206ENST00000468253 FLT3LGP49771 235 aa23.5■■□□□ 1.35
NPHP4-206ENST00000468253 PRKCZQ05513 592 aa23.5■■□□□ 1.35
NPHP4-206ENST00000468253 SEC23AQ15436 765 aa23.5■■□□□ 1.35
NPHP4-206ENST00000468253 RAET1EQ8TD07 263 aa23.5■■□□□ 1.35
NPHP4-206ENST00000468253 PXYLP1Q8TE99 480 aa23.5■■□□□ 1.35
NPHP4-206ENST00000468253 KCNB2Q92953 911 aa23.5■■□□□ 1.35
NPHP4-206ENST00000468253 ARMC5Q96C12 935 aa23.5■■□□□ 1.35
NPHP4-206ENST00000468253 MOV10L1Q9BXT6 1211 aaKnown RBP23.5■■□□□ 1.35
NPHP4-206ENST00000468253 KAT14Q9H8E8 782 aa23.5■■□□□ 1.35
NPHP4-206ENST00000468253 SLC38A10Q9HBR0 1119 aa23.5■■□□□ 1.35
NPHP4-206ENST00000468253 PTCH2Q9Y6C5 1203 aa23.5■■□□□ 1.35
NPHP4-206ENST00000468253 TNKSO95271 1327 aa23.5■■□□□ 1.35
NPHP4-206ENST00000468253 STAT3P40763 770 aa23.49■■□□□ 1.35
NPHP4-206ENST00000468253 OAZ1P54368 228 aa23.49■■□□□ 1.35
NPHP4-206ENST00000468253 SART3Q15020 963 aaKnown RBP23.49■■□□□ 1.35
NPHP4-206ENST00000468253 GPR142Q7Z601 462 aa23.49■■□□□ 1.35
NPHP4-206ENST00000468253 RIOX2Q8IUF8 465 aa23.49■■□□□ 1.35
NPHP4-206ENST00000468253 MB21D2Q8IYB1 491 aaPredicted RBP23.49■■□□□ 1.35
NPHP4-206ENST00000468253 PNMA1Q8ND90 353 aa23.49■■□□□ 1.35
NPHP4-206ENST00000468253 KIFC2Q96AC6 838 aa23.49■■□□□ 1.35
NPHP4-206ENST00000468253 GABRQQ9UN88 632 aa23.49■■□□□ 1.35
NPHP4-206ENST00000468253 ECM2O94769 699 aaPredicted RBP23.48■■□□□ 1.35
NPHP4-206ENST00000468253 PDHBP11177 359 aa23.48■■□□□ 1.35
NPHP4-206ENST00000468253 XRCC5P13010 732 aaKnown RBP23.48■■□□□ 1.35
NPHP4-206ENST00000468253 ZKSCAN1P17029 563 aaPredicted RBP23.48■■□□□ 1.35
NPHP4-206ENST00000468253 MORN1Q5T089 497 aa23.48■■□□□ 1.35
NPHP4-206ENST00000468253 GPATCH4Q5T3I0 446 aaKnown RBP23.48■■□□□ 1.35
NPHP4-206ENST00000468253 IFIT1BQ5T764 474 aaKnown RBP23.48■■□□□ 1.35
NPHP4-206ENST00000468253 KCTD1Q719H9 257 aa23.48■■□□□ 1.35
NPHP4-206ENST00000468253 TMTC2Q8N394 836 aa23.48■■□□□ 1.35
NPHP4-206ENST00000468253 SOCS4Q8WXH5 440 aa23.48■■□□□ 1.35
NPHP4-206ENST00000468253 USP6NLQ92738 828 aa23.48■■□□□ 1.35
NPHP4-206ENST00000468253 NUDT12Q9BQG2 462 aa23.48■■□□□ 1.35
NPHP4-206ENST00000468253 ZNF214Q9UL59 606 aaPredicted RBP23.48■■□□□ 1.35
NPHP4-206ENST00000468253 ERICH2A1L162 156 aa23.47■■□□□ 1.35
NPHP4-206ENST00000468253 SLC15A5A6NIM6 579 aa23.47■■□□□ 1.35
NPHP4-206ENST00000468253 IFIT3O14879 490 aaKnown RBP23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 492 ms