RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 SHISA3A0PJX4 238 aa7.77□□□□□ -1.17
XRN1-206ENST00000467077 NOTOA8MTQ0 251 aa7.77□□□□□ -1.17
XRN1-206ENST00000467077 PNLIPP16233 465 aa7.77□□□□□ -1.17
XRN1-206ENST00000467077 YBX1P67809 324 aaKnown RBP7.77□□□□□ -1.17
XRN1-206ENST00000467077 FMR1Q06787 632 aaKnown RBP eCLIP7.77□□□□□ -1.17
XRN1-206ENST00000467077 TMEFF1Q8IYR6 380 aa7.77□□□□□ -1.17
XRN1-206ENST00000467077 MAP6Q96JE9 813 aa7.77□□□□□ -1.17
XRN1-206ENST00000467077 SDHBP21912 280 aa7.76□□□□□ -1.17
XRN1-206ENST00000467077 ARL4AP40617 200 aa7.76□□□□□ -1.17
XRN1-206ENST00000467077 RTP5Q14D33 572 aa7.76□□□□□ -1.17
XRN1-206ENST00000467077 ZNF827Q17R98 1081 aa7.76□□□□□ -1.17
XRN1-206ENST00000467077 KREMEN1Q96MU8 473 aa7.76□□□□□ -1.17
XRN1-206ENST00000467077 K7ESM1 405 aa7.75□□□□□ -1.17
XRN1-206ENST00000467077 MPOP05164 745 aa7.75□□□□□ -1.17
XRN1-206ENST00000467077 LIG3P49916 1009 aa7.75□□□□□ -1.17
XRN1-206ENST00000467077 HHIPL2Q6UWX4 724 aa7.75□□□□□ -1.17
XRN1-206ENST00000467077 AGMOQ6ZNB7 445 aa7.75□□□□□ -1.17
XRN1-206ENST00000467077 TMC6Q7Z403 805 aa7.75□□□□□ -1.17
XRN1-206ENST00000467077 ZSCAN29Q8IWY8 852 aaPredicted RBP7.75□□□□□ -1.17
XRN1-206ENST00000467077 CNOT11Q9UKZ1 510 aaKnown RBP7.75□□□□□ -1.17
XRN1-206ENST00000467077 UPK3BL1B0FP48 263 aa7.74□□□□□ -1.17
XRN1-206ENST00000467077 UPK3BL2E5RIL1 263 aa7.74□□□□□ -1.17
XRN1-206ENST00000467077 EFEMP2O95967 443 aa7.74□□□□□ -1.17
XRN1-206ENST00000467077 KCNC1P48547 511 aa7.74□□□□□ -1.17
XRN1-206ENST00000467077 ERVFRD-1P60508 538 aa7.74□□□□□ -1.17
XRN1-206ENST00000467077 MAP3K11Q16584 847 aa7.74□□□□□ -1.17
XRN1-206ENST00000467077 WWC3Q9ULE0 1092 aa7.74□□□□□ -1.17
XRN1-206ENST00000467077 ZNF281Q9Y2X9 895 aa7.74□□□□□ -1.17
XRN1-206ENST00000467077 SUV39H1O43463 412 aa7.73□□□□□ -1.17
XRN1-206ENST00000467077 PCBP3P57721 371 aaKnown RBP7.73□□□□□ -1.17
XRN1-206ENST00000467077 NMIQ13287 307 aaPredicted RBP7.73□□□□□ -1.17
XRN1-206ENST00000467077 LDHDQ86WU2 507 aa7.73□□□□□ -1.17
XRN1-206ENST00000467077 IGDCC3Q8IVU1 814 aa7.73□□□□□ -1.17
XRN1-206ENST00000467077 NLGN1Q8N2Q7 840 aa7.73□□□□□ -1.17
XRN1-206ENST00000467077 ENOX1Q8TC92 643 aaKnown RBP7.73□□□□□ -1.17
XRN1-206ENST00000467077 SYTL5Q8TDW5 730 aaPredicted RBP7.73□□□□□ -1.17
XRN1-206ENST00000467077 FRMD6Q96NE9 622 aa7.73□□□□□ -1.17
XRN1-206ENST00000467077 FOXP3Q9BZS1 431 aa7.73□□□□□ -1.17
XRN1-206ENST00000467077 TAF6LQ9Y6J9 622 aa7.73□□□□□ -1.17
XRN1-206ENST00000467077 BPNT1O95861 308 aa7.72□□□□□ -1.17
XRN1-206ENST00000467077 EIF4BP23588 611 aaKnown RBP7.72□□□□□ -1.17
XRN1-206ENST00000467077 RAB3GAP1Q15042 981 aa7.72□□□□□ -1.17
XRN1-206ENST00000467077 UBXN11Q5T124 520 aa7.72□□□□□ -1.17
XRN1-206ENST00000467077 SLFN12Q8IYM2 578 aa7.72□□□□□ -1.17
XRN1-206ENST00000467077 USP40Q9NVE5 1235 aa7.72□□□□□ -1.17
XRN1-206ENST00000467077 TCFL5Q9UL49 500 aa7.72□□□□□ -1.17
XRN1-206ENST00000467077 CORINQ9Y5Q5 1042 aa7.72□□□□□ -1.17
XRN1-206ENST00000467077 BUB1BO60566 1050 aaPredicted RBP7.71□□□□□ -1.18
XRN1-206ENST00000467077 RTP1P59025 263 aa7.71□□□□□ -1.18
XRN1-206ENST00000467077 PDE4CQ08493 712 aa7.71□□□□□ -1.18
XRN1-206ENST00000467077 JARID2Q92833 1246 aaPredicted RBP7.71□□□□□ -1.18
XRN1-206ENST00000467077 HHIPL1Q96JK4 782 aa7.71□□□□□ -1.18
XRN1-206ENST00000467077 CCDC74BQ96LY2 380 aa7.71□□□□□ -1.18
XRN1-206ENST00000467077 PRICKLE3O43900 615 aaPredicted RBP7.7□□□□□ -1.18
XRN1-206ENST00000467077 TMEM201Q5SNT2 666 aa7.7□□□□□ -1.18
XRN1-206ENST00000467077 GALNT18Q6P9A2 607 aa7.7□□□□□ -1.18
XRN1-206ENST00000467077 PHACTR4Q8IZ21 702 aa7.7□□□□□ -1.18
XRN1-206ENST00000467077 TP53I13Q8NBR0 393 aaPredicted RBP7.7□□□□□ -1.18
XRN1-206ENST00000467077 PLCD4Q9BRC7 762 aa7.7□□□□□ -1.18
XRN1-206ENST00000467077 HDAC8Q9BY41 377 aa7.7□□□□□ -1.18
XRN1-206ENST00000467077 SRRDQ9UH36 339 aa7.7□□□□□ -1.18
XRN1-206ENST00000467077 KLHL3Q9UH77 587 aa7.7□□□□□ -1.18
XRN1-206ENST00000467077 FKTNO75072 461 aa7.69□□□□□ -1.18
XRN1-206ENST00000467077 TFE3P19532 575 aaPredicted RBP7.69□□□□□ -1.18
XRN1-206ENST00000467077 LAPTM5Q13571 262 aa7.69□□□□□ -1.18
XRN1-206ENST00000467077 C1orf115Q9H7X2 142 aa7.69□□□□□ -1.18
XRN1-206ENST00000467077 KLHL14Q9P2G3 628 aa7.69□□□□□ -1.18
XRN1-206ENST00000467077 NUDT19A8MXV4 375 aa7.68□□□□□ -1.18
XRN1-206ENST00000467077 AKAP8O43823 692 aaKnown RBP7.68□□□□□ -1.18
XRN1-206ENST00000467077 RLBP1P12271 317 aa7.68□□□□□ -1.18
XRN1-206ENST00000467077 SLURP1P55000 103 aa7.68□□□□□ -1.18
XRN1-206ENST00000467077 ZFYVE27Q5T4F4 411 aa7.68□□□□□ -1.18
XRN1-206ENST00000467077 USHBP1Q8N6Y0 703 aa7.68□□□□□ -1.18
XRN1-206ENST00000467077 ZNF655Q8N720 491 aaPredicted RBP7.68□□□□□ -1.18
XRN1-206ENST00000467077 DAGLBQ8NCG7 672 aa7.68□□□□□ -1.18
XRN1-206ENST00000467077 TCTN2Q96GX1 697 aa7.68□□□□□ -1.18
XRN1-206ENST00000467077 FCRL2Q96LA5 508 aaPredicted RBP7.68□□□□□ -1.18
XRN1-206ENST00000467077 PCDHA5Q9Y5H7 936 aa7.68□□□□□ -1.18
XRN1-206ENST00000467077 TMEM82A0PJX8 343 aa7.67□□□□□ -1.18
XRN1-206ENST00000467077 WTIPA6NIX2 430 aaPredicted RBP7.67□□□□□ -1.18
XRN1-206ENST00000467077 SYPP08247 313 aa7.67□□□□□ -1.18
XRN1-206ENST00000467077 PFKLP17858 780 aa7.67□□□□□ -1.18
XRN1-206ENST00000467077 RNF4P78317 190 aa7.67□□□□□ -1.18
XRN1-206ENST00000467077 ZXDAP98168 799 aa7.67□□□□□ -1.18
XRN1-206ENST00000467077 CAP1Q01518 475 aa7.67□□□□□ -1.18
XRN1-206ENST00000467077 VWCEQ96DN2 955 aa7.67□□□□□ -1.18
XRN1-206ENST00000467077 TNFRSF10DQ9UBN6 386 aa7.67□□□□□ -1.18
XRN1-206ENST00000467077 GRIN3BO60391 1043 aa7.66□□□□□ -1.18
XRN1-206ENST00000467077 GBP1P32455 592 aa7.66□□□□□ -1.18
XRN1-206ENST00000467077 NCKAP1LP55160 1127 aa7.66□□□□□ -1.18
XRN1-206ENST00000467077 HSF5Q4G112 596 aaPredicted RBP7.66□□□□□ -1.18
XRN1-206ENST00000467077 RETREG2Q8NC44 543 aa7.66□□□□□ -1.18
XRN1-206ENST00000467077 CRELD1Q96HD1 420 aa7.66□□□□□ -1.18
XRN1-206ENST00000467077 GPR55Q9Y2T6 319 aaPredicted RBP7.66□□□□□ -1.18
XRN1-206ENST00000467077 FFAR3O14843 346 aa7.65□□□□□ -1.18
XRN1-206ENST00000467077 LDHBP07195 334 aaKnown RBP7.65□□□□□ -1.18
XRN1-206ENST00000467077 GNA15P30679 374 aa7.65□□□□□ -1.18
XRN1-206ENST00000467077 MAGEA10P43363 369 aaPredicted RBP7.65□□□□□ -1.18
XRN1-206ENST00000467077 LIMS1P48059 325 aa7.65□□□□□ -1.18
XRN1-206ENST00000467077 LINC00116Q8NCU8 138 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms