RNA–Protein interactions for RNA: ENST00000467044.1

NUP188-204, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 584 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-204ENST00000467044 CCDC196A0A1B0GTZ2 297 aa12.51□□□□□ -0.41
NUP188-204ENST00000467044 DTNBO60941 627 aa12.51□□□□□ -0.41
NUP188-204ENST00000467044 BMP3P12645 472 aa12.51□□□□□ -0.41
NUP188-204ENST00000467044 RCAN1P53805 252 aa12.51□□□□□ -0.41
NUP188-204ENST00000467044 HMGCS2P54868 508 aa12.51□□□□□ -0.41
NUP188-204ENST00000467044 IKQ13123 557 aaPredicted RBP12.51□□□□□ -0.41
NUP188-204ENST00000467044 PPP2R5BQ15173 497 aa12.51□□□□□ -0.41
NUP188-204ENST00000467044 ASPRV1Q53RT3 343 aa12.51□□□□□ -0.41
NUP188-204ENST00000467044 RGMBQ6NW40 437 aa12.51□□□□□ -0.41
NUP188-204ENST00000467044 CPLX2Q6PUV4 134 aaKnown RBP12.51□□□□□ -0.41
NUP188-204ENST00000467044 GADL1Q6ZQY3 521 aa12.51□□□□□ -0.41
NUP188-204ENST00000467044 CMTR1Q8N1G2 835 aaKnown RBP12.51□□□□□ -0.41
NUP188-204ENST00000467044 STAG2Q8N3U4 1231 aa12.51□□□□□ -0.41
NUP188-204ENST00000467044 CCDC82Q8N4S0 544 aa12.51□□□□□ -0.41
NUP188-204ENST00000467044 WNK4Q96J92 1243 aa12.51□□□□□ -0.41
NUP188-204ENST00000467044 MAP3K14Q99558 947 aa12.51□□□□□ -0.41
NUP188-204ENST00000467044 EMILIN3Q9NT22 766 aa12.51□□□□□ -0.41
NUP188-204ENST00000467044 MAD2L2Q9UI95 211 aa12.51□□□□□ -0.41
NUP188-204ENST00000467044 TLL2Q9Y6L7 1015 aa12.51□□□□□ -0.41
NUP188-204ENST00000467044 PALM3A6NDB9 673 aaPredicted RBP12.5□□□□□ -0.41
NUP188-204ENST00000467044 KLRF2D3W0D1 207 aa12.5□□□□□ -0.41
NUP188-204ENST00000467044 CXCL11O14625 94 aa12.5□□□□□ -0.41
NUP188-204ENST00000467044 PPFIA3O75145 1194 aa12.5□□□□□ -0.41
NUP188-204ENST00000467044 PLEKHA8P1O95397 391 aa12.5□□□□□ -0.41
NUP188-204ENST00000467044 SNHG28P0DPA3 235 aa12.5□□□□□ -0.41
NUP188-204ENST00000467044 GJA5P36382 358 aa12.5□□□□□ -0.41
NUP188-204ENST00000467044 GNAQP50148 359 aa12.5□□□□□ -0.41
NUP188-204ENST00000467044 ZNF543Q08ER8 600 aa12.5□□□□□ -0.41
NUP188-204ENST00000467044 ST3GAL1Q11201 340 aa12.5□□□□□ -0.41
NUP188-204ENST00000467044 FAM83BQ5T0W9 1011 aa12.5□□□□□ -0.41
NUP188-204ENST00000467044 GPATCH4Q5T3I0 446 aaKnown RBP12.5□□□□□ -0.41
NUP188-204ENST00000467044 TTBK2Q6IQ55 1244 aa12.5□□□□□ -0.41
NUP188-204ENST00000467044 SAMD1Q6SPF0 538 aaPredicted RBP12.5□□□□□ -0.41
NUP188-204ENST00000467044 PAXIP1Q6ZW49 1069 aaPredicted RBP12.5□□□□□ -0.41
NUP188-204ENST00000467044 LPAR1Q92633 364 aa12.5□□□□□ -0.41
NUP188-204ENST00000467044 GMCL1Q96IK5 515 aa12.5□□□□□ -0.41
NUP188-204ENST00000467044 UBA5Q9GZZ9 404 aa12.5□□□□□ -0.41
NUP188-204ENST00000467044 FAM217BQ9NTX9 383 aaPredicted RBP12.5□□□□□ -0.41
NUP188-204ENST00000467044 BAZ2BQ9UIF8 2168 aaKnown RBP12.49□□□□□ -0.41
NUP188-204ENST00000467044 TMEM232C9JQI7 657 aa12.49□□□□□ -0.41
NUP188-204ENST00000467044 WDR46O15213 610 aaKnown RBP12.49□□□□□ -0.41
NUP188-204ENST00000467044 SLC16A2P36021 539 aa12.49□□□□□ -0.41
NUP188-204ENST00000467044 APLP1P51693 650 aa12.49□□□□□ -0.41
NUP188-204ENST00000467044 GRM1Q13255 1194 aa12.49□□□□□ -0.41
NUP188-204ENST00000467044 SNAPC2Q13487 334 aa12.49□□□□□ -0.41
NUP188-204ENST00000467044 CUL4AQ13619 759 aa12.49□□□□□ -0.41
NUP188-204ENST00000467044 SH3D19Q5HYK7 790 aa12.49□□□□□ -0.41
NUP188-204ENST00000467044 SPRYD7Q5W111 196 aa12.49□□□□□ -0.41
NUP188-204ENST00000467044 TMTC3Q6ZXV5 915 aa12.49□□□□□ -0.41
NUP188-204ENST00000467044 PIBF1Q8WXW3 757 aa12.49□□□□□ -0.41
NUP188-204ENST00000467044 LZTS2Q9BRK4 669 aa12.49□□□□□ -0.41
NUP188-204ENST00000467044 TANGO6Q9C0B7 1094 aa12.49□□□□□ -0.41
NUP188-204ENST00000467044 CPVLQ9H3G5 476 aa12.49□□□□□ -0.41
NUP188-204ENST00000467044 VAT1LQ9HCJ6 419 aa12.49□□□□□ -0.41
NUP188-204ENST00000467044 KCNH4Q9UQ05 1017 aa12.49□□□□□ -0.41
NUP188-204ENST00000467044 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.49□□□□□ -0.41
NUP188-204ENST00000467044 NID2Q14112 1375 aa12.48□□□□□ -0.41
NUP188-204ENST00000467044 A0A0G2JLL6 359 aaPredicted RBP12.48□□□□□ -0.41
NUP188-204ENST00000467044 CDKL5O76039 1030 aa12.48□□□□□ -0.41
NUP188-204ENST00000467044 VCAM1P19320 739 aa12.48□□□□□ -0.41
NUP188-204ENST00000467044 AKAP17AQ02040 695 aaKnown RBP12.48□□□□□ -0.41
NUP188-204ENST00000467044 SSRP1Q08945 709 aaKnown RBP12.48□□□□□ -0.41
NUP188-204ENST00000467044 PRRT2Q7Z6L0 340 aaPredicted RBP12.48□□□□□ -0.41
NUP188-204ENST00000467044 RASAL3Q86YV0 1011 aa12.48□□□□□ -0.41
NUP188-204ENST00000467044 SRBD1Q8N5C6 995 aaKnown RBP12.48□□□□□ -0.41
NUP188-204ENST00000467044 CHURC1Q8WUH1 139 aa12.48□□□□□ -0.41
NUP188-204ENST00000467044 PHKBQ93100 1093 aa12.48□□□□□ -0.41
NUP188-204ENST00000467044 DDX11Q96FC9 970 aa12.48□□□□□ -0.41
NUP188-204ENST00000467044 C12orf42Q96LP6 360 aa12.48□□□□□ -0.41
NUP188-204ENST00000467044 IPO9Q96P70 1041 aaKnown RBP12.48□□□□□ -0.41
NUP188-204ENST00000467044 SLC26A6Q9BXS9 759 aa12.48□□□□□ -0.41
NUP188-204ENST00000467044 RPAP3Q9H6T3 665 aaPredicted RBP12.48□□□□□ -0.41
NUP188-204ENST00000467044 SMC3Q9UQE7 1217 aa12.48□□□□□ -0.41
NUP188-204ENST00000467044 PTPRFP10586 1907 aa12.48□□□□□ -0.41
NUP188-204ENST00000467044 JAK2O60674 1132 aa12.47□□□□□ -0.41
NUP188-204ENST00000467044 CTDNEP1O95476 244 aa12.47□□□□□ -0.41
NUP188-204ENST00000467044 ZBTB48P10074 688 aaPredicted RBP12.47□□□□□ -0.41
NUP188-204ENST00000467044 IFNAR1P17181 557 aa12.47□□□□□ -0.41
NUP188-204ENST00000467044 STAT2P52630 851 aa12.47□□□□□ -0.41
NUP188-204ENST00000467044 GTF2A2P52657 109 aa12.47□□□□□ -0.41
NUP188-204ENST00000467044 NTRK3Q16288 839 aa12.47□□□□□ -0.41
NUP188-204ENST00000467044 FASTKD5Q7L8L6 764 aaKnown RBP12.47□□□□□ -0.41
NUP188-204ENST00000467044 NBPF11Q86T75 865 aa12.47□□□□□ -0.41
NUP188-204ENST00000467044 TRIM22Q8IYM9 498 aa12.47□□□□□ -0.41
NUP188-204ENST00000467044 NSUN7Q8NE18 718 aaKnown RBP12.47□□□□□ -0.41
NUP188-204ENST00000467044 CCDC102AQ96A19 550 aa12.47□□□□□ -0.41
NUP188-204ENST00000467044 KIFC2Q96AC6 838 aa12.47□□□□□ -0.41
NUP188-204ENST00000467044 LLPHQ9BRT6 129 aaKnown RBP12.47□□□□□ -0.41
NUP188-204ENST00000467044 CREBZFQ9NS37 354 aa12.47□□□□□ -0.41
NUP188-204ENST00000467044 FEM1BQ9UK73 627 aa12.47□□□□□ -0.41
NUP188-204ENST00000467044 CCL15-CCL14A0A0B4J2E2 113 aa12.46□□□□□ -0.41
NUP188-204ENST00000467044 hCG_1642624A0A1W2PR95 340 aa12.46□□□□□ -0.41
NUP188-204ENST00000467044 PTPDC1A2A3K4 754 aa12.46□□□□□ -0.41
NUP188-204ENST00000467044 USP17L15C9J2P7 530 aa12.46□□□□□ -0.41
NUP188-204ENST00000467044 USP17L13C9JLJ4 530 aa12.46□□□□□ -0.41
NUP188-204ENST00000467044 USP17L11C9JVI0 530 aa12.46□□□□□ -0.41
NUP188-204ENST00000467044 USP17L18D6R9N7 530 aa12.46□□□□□ -0.41
NUP188-204ENST00000467044 USP17L22D6RA61 530 aa12.46□□□□□ -0.41
NUP188-204ENST00000467044 USP17L17D6RBQ6 530 aa12.46□□□□□ -0.41
NUP188-204ENST00000467044 USP17L19D6RCP7 530 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms