RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 ANP32BQ92688 251 aaKnown RBP7.16□□□□□ -1.26
LRCH3-212ENST00000466845 ACSF2Q96CM8 615 aaPredicted RBP7.16□□□□□ -1.26
LRCH3-212ENST00000466845 ZNF830Q96NB3 372 aaPredicted RBP7.16□□□□□ -1.26
LRCH3-212ENST00000466845 SEMA3GQ9NS98 782 aa7.16□□□□□ -1.26
LRCH3-212ENST00000466845 GNL3LQ9NVN8 582 aaKnown RBP7.16□□□□□ -1.26
LRCH3-212ENST00000466845 GOLGA6AQ9NYA3 693 aa7.16□□□□□ -1.26
LRCH3-212ENST00000466845 CFTRP13569 1480 aa7.16□□□□□ -1.26
LRCH3-212ENST00000466845 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.15□□□□□ -1.26
LRCH3-212ENST00000466845 RRP9O43818 475 aaKnown RBP7.15□□□□□ -1.26
LRCH3-212ENST00000466845 DHX16O60231 1041 aaKnown RBP7.15□□□□□ -1.26
LRCH3-212ENST00000466845 PAPLNO95428 1278 aa7.15□□□□□ -1.26
LRCH3-212ENST00000466845 ZNF16P17020 682 aaPredicted RBP7.15□□□□□ -1.26
LRCH3-212ENST00000466845 SNAP47Q5SQN1 464 aa7.15□□□□□ -1.26
LRCH3-212ENST00000466845 ZKSCAN2Q63HK3 967 aa7.15□□□□□ -1.26
LRCH3-212ENST00000466845 BNC2Q6ZN30 1099 aaPredicted RBP7.15□□□□□ -1.26
LRCH3-212ENST00000466845 GET4Q7L5D6 327 aaPredicted RBP7.15□□□□□ -1.26
LRCH3-212ENST00000466845 TMPRSS7Q7RTY8 843 aa7.15□□□□□ -1.26
LRCH3-212ENST00000466845 ERMP1Q7Z2K6 904 aa7.15□□□□□ -1.26
LRCH3-212ENST00000466845 C11orf96Q7Z7L8 435 aa7.15□□□□□ -1.26
LRCH3-212ENST00000466845 SLFN12Q8IYM2 578 aa7.15□□□□□ -1.26
LRCH3-212ENST00000466845 RIN3Q8TB24 985 aa7.15□□□□□ -1.26
LRCH3-212ENST00000466845 CYB5D2Q8WUJ1 264 aa7.15□□□□□ -1.26
LRCH3-212ENST00000466845 HSPA12BQ96MM6 686 aa7.15□□□□□ -1.26
LRCH3-212ENST00000466845 TRIT1Q9H3H1 467 aaKnown RBP7.15□□□□□ -1.26
LRCH3-212ENST00000466845 KCNQ5Q9NR82 932 aa7.15□□□□□ -1.26
LRCH3-212ENST00000466845 FAM53CQ9NYF3 392 aa7.15□□□□□ -1.26
LRCH3-212ENST00000466845 PRDM4Q9UKN5 801 aa7.15□□□□□ -1.26
LRCH3-212ENST00000466845 KCNH3Q9ULD8 1083 aa7.15□□□□□ -1.26
LRCH3-212ENST00000466845 ST14Q9Y5Y6 855 aa7.15□□□□□ -1.26
LRCH3-212ENST00000466845 RPGRIP1LQ68CZ1 1315 aa7.15□□□□□ -1.26
LRCH3-212ENST00000466845 PRDM2Q13029 1718 aa7.15□□□□□ -1.27
LRCH3-212ENST00000466845 F13A1P00488 732 aa7.14□□□□□ -1.27
LRCH3-212ENST00000466845 SCP2P22307 547 aa7.14□□□□□ -1.27
LRCH3-212ENST00000466845 AFMP43652 599 aa7.14□□□□□ -1.27
LRCH3-212ENST00000466845 IRX3P78415 501 aaPredicted RBP7.14□□□□□ -1.27
LRCH3-212ENST00000466845 HDAC1Q13547 482 aaPredicted RBP7.14□□□□□ -1.27
LRCH3-212ENST00000466845 DDX46Q7L014 1031 aaKnown RBP7.14□□□□□ -1.27
LRCH3-212ENST00000466845 CDH24Q86UP0 819 aa7.14□□□□□ -1.27
LRCH3-212ENST00000466845 FAM13CQ8NE31 585 aa7.14□□□□□ -1.27
LRCH3-212ENST00000466845 SENP7Q9BQF6 1050 aa7.14□□□□□ -1.27
LRCH3-212ENST00000466845 CHPF2Q9P2E5 772 aa7.14□□□□□ -1.27
LRCH3-212ENST00000466845 GABBR1Q9UBS5 961 aa7.14□□□□□ -1.27
LRCH3-212ENST00000466845 FEZ2Q9UHY8 353 aaPredicted RBP7.14□□□□□ -1.27
LRCH3-212ENST00000466845 FRMD4BQ9Y2L6 1034 aa7.14□□□□□ -1.27
LRCH3-212ENST00000466845 KRTAP9-6A0A140TA67 174 aa7.13□□□□□ -1.27
LRCH3-212ENST00000466845 CFAP69A5D8W1 941 aa7.13□□□□□ -1.27
LRCH3-212ENST00000466845 CBX7O95931 251 aa7.13□□□□□ -1.27
LRCH3-212ENST00000466845 APPP05067 770 aa7.13□□□□□ -1.27
LRCH3-212ENST00000466845 IGBP1P78318 339 aa7.13□□□□□ -1.27
LRCH3-212ENST00000466845 TAGLNQ01995 201 aaKnown RBP7.13□□□□□ -1.27
LRCH3-212ENST00000466845 MRPL58Q14197 206 aaKnown RBP7.13□□□□□ -1.27
LRCH3-212ENST00000466845 CDKAL1Q5VV42 579 aa7.13□□□□□ -1.27
LRCH3-212ENST00000466845 FAM196AQ6ZSG2 479 aa7.13□□□□□ -1.27
LRCH3-212ENST00000466845 HS2ST1Q7LGA3 356 aa7.13□□□□□ -1.27
LRCH3-212ENST00000466845 MSL3Q8N5Y2 521 aaKnown RBP7.13□□□□□ -1.27
LRCH3-212ENST00000466845 POU5F2Q8N7G0 328 aa7.13□□□□□ -1.27
LRCH3-212ENST00000466845 GOLM1Q8NBJ4 401 aa7.13□□□□□ -1.27
LRCH3-212ENST00000466845 LRRN4CLQ8ND94 238 aa7.13□□□□□ -1.27
LRCH3-212ENST00000466845 DNAJB8Q8NHS0 232 aa7.13□□□□□ -1.27
LRCH3-212ENST00000466845 PNISRQ8TF01 805 aaKnown RBP7.13□□□□□ -1.27
LRCH3-212ENST00000466845 GIPC2Q8TF65 315 aa7.13□□□□□ -1.27
LRCH3-212ENST00000466845 XAGE3Q8WTP9 111 aa7.13□□□□□ -1.27
LRCH3-212ENST00000466845 KRTAP4-12Q9BQ66 201 aa7.13□□□□□ -1.27
LRCH3-212ENST00000466845 LRRC3Q9BY71 257 aa7.13□□□□□ -1.27
LRCH3-212ENST00000466845 ADAMTS6Q9UKP5 1117 aa7.13□□□□□ -1.27
LRCH3-212ENST00000466845 PRR33A8MZF0 331 aa7.12□□□□□ -1.27
LRCH3-212ENST00000466845 WDHD1O75717 1129 aaPredicted RBP7.12□□□□□ -1.27
LRCH3-212ENST00000466845 COPB2P35606 906 aa7.12□□□□□ -1.27
LRCH3-212ENST00000466845 CD96P40200 585 aa7.12□□□□□ -1.27
LRCH3-212ENST00000466845 PTPROQ16827 1216 aa7.12□□□□□ -1.27
LRCH3-212ENST00000466845 CWF19L2Q2TBE0 894 aaKnown RBP7.12□□□□□ -1.27
LRCH3-212ENST00000466845 REC114Q7Z4M0 266 aa7.12□□□□□ -1.27
LRCH3-212ENST00000466845 NOP9Q86U38 636 aaKnown RBP7.12□□□□□ -1.27
LRCH3-212ENST00000466845 CCDC74BQ96LY2 380 aa7.12□□□□□ -1.27
LRCH3-212ENST00000466845 NRBP1Q9UHY1 535 aa7.12□□□□□ -1.27
LRCH3-212ENST00000466845 SUPT16HQ9Y5B9 1047 aaKnown RBP7.12□□□□□ -1.27
LRCH3-212ENST00000466845 CNTNAP4Q9C0A0 1308 aa7.11□□□□□ -1.27
LRCH3-212ENST00000466845 hCG_2014768A0A024R1R8 64 aa7.11□□□□□ -1.27
LRCH3-212ENST00000466845 MINDY4BA8MYZ0 360 aa7.11□□□□□ -1.27
LRCH3-212ENST00000466845 STK10O94804 968 aaKnown RBP7.11□□□□□ -1.27
LRCH3-212ENST00000466845 EIF4A3P38919 411 aaKnown RBP7.11□□□□□ -1.27
LRCH3-212ENST00000466845 CALD1Q05682 793 aaKnown RBP7.11□□□□□ -1.27
LRCH3-212ENST00000466845 TNK2Q07912 1038 aa7.11□□□□□ -1.27
LRCH3-212ENST00000466845 HSP90AB2PQ58FF8 381 aa7.11□□□□□ -1.27
LRCH3-212ENST00000466845 EGFLAMQ63HQ2 1017 aa7.11□□□□□ -1.27
LRCH3-212ENST00000466845 CREBRFQ8IUR6 639 aa7.11□□□□□ -1.27
LRCH3-212ENST00000466845 RNF141Q8WVD5 230 aa7.11□□□□□ -1.27
LRCH3-212ENST00000466845 FAM168AQ92567 244 aa7.11□□□□□ -1.27
LRCH3-212ENST00000466845 UBE2FQ969M7 185 aa7.11□□□□□ -1.27
LRCH3-212ENST00000466845 GPR62Q9BZJ7 368 aa7.11□□□□□ -1.27
LRCH3-212ENST00000466845 ATP13A1Q9HD20 1204 aa7.11□□□□□ -1.27
LRCH3-212ENST00000466845 KBTBD4Q9NVX7 518 aa7.11□□□□□ -1.27
LRCH3-212ENST00000466845 GPATCH2Q9NW75 528 aa7.11□□□□□ -1.27
LRCH3-212ENST00000466845 FBXO9Q9UK97 447 aaPredicted RBP7.11□□□□□ -1.27
LRCH3-212ENST00000466845 CCDC88BA6NC98 1476 aa7.11□□□□□ -1.27
LRCH3-212ENST00000466845 H3BS24 57 aa7.1□□□□□ -1.27
LRCH3-212ENST00000466845 GREM1O60565 184 aa7.1□□□□□ -1.27
LRCH3-212ENST00000466845 HTR3BO95264 441 aa7.1□□□□□ -1.27
LRCH3-212ENST00000466845 GARTP22102 1010 aa7.1□□□□□ -1.27
LRCH3-212ENST00000466845 GDNFP39905 211 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms