RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 TBC1D32Q96NH3 1257 aa6.37□□□□□ -1.39
CDC42BPA-211ENST00000466538 C7orf69Q9H7B7 122 aa6.37□□□□□ -1.39
CDC42BPA-211ENST00000466538 LRP2BPQ9P2M1 347 aa6.37□□□□□ -1.39
CDC42BPA-211ENST00000466538 FBXL21Q9UKT6 434 aa6.37□□□□□ -1.39
CDC42BPA-211ENST00000466538 A0A1W2PQU0 124 aa6.36□□□□□ -1.39
CDC42BPA-211ENST00000466538 ESYT3A0FGR9 886 aa6.36□□□□□ -1.39
CDC42BPA-211ENST00000466538 HMX2A2RU54 273 aa6.36□□□□□ -1.39
CDC42BPA-211ENST00000466538 ANKRD62A6NC57 917 aa6.36□□□□□ -1.39
CDC42BPA-211ENST00000466538 ADCY3O60266 1144 aa6.36□□□□□ -1.39
CDC42BPA-211ENST00000466538 HMGB1P09429 215 aaKnown RBP6.36□□□□□ -1.39
CDC42BPA-211ENST00000466538 FAM153BP0C7A2 387 aa6.36□□□□□ -1.39
CDC42BPA-211ENST00000466538 TCEA2Q15560 299 aa6.36□□□□□ -1.39
CDC42BPA-211ENST00000466538 TMEM67Q5HYA8 995 aa6.36□□□□□ -1.39
CDC42BPA-211ENST00000466538 NOL9Q5SY16 702 aaKnown RBP6.36□□□□□ -1.39
CDC42BPA-211ENST00000466538 DUSP27Q5VZP5 1158 aa6.36□□□□□ -1.39
CDC42BPA-211ENST00000466538 RNF43Q68DV7 783 aa6.36□□□□□ -1.39
CDC42BPA-211ENST00000466538 PRR23CQ6ZRP0 262 aa6.36□□□□□ -1.39
CDC42BPA-211ENST00000466538 KIAA0907Q7Z7F0 614 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-211ENST00000466538 SLC51AQ86UW1 340 aa6.36□□□□□ -1.39
CDC42BPA-211ENST00000466538 LRRN4CLQ8ND94 238 aa6.36□□□□□ -1.39
CDC42BPA-211ENST00000466538 PIWIL2Q8TC59 973 aaKnown RBP6.36□□□□□ -1.39
CDC42BPA-211ENST00000466538 ENOX1Q8TC92 643 aaKnown RBP6.36□□□□□ -1.39
CDC42BPA-211ENST00000466538 SYTL5Q8TDW5 730 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-211ENST00000466538 FGD4Q96M96 766 aa6.36□□□□□ -1.39
CDC42BPA-211ENST00000466538 ASCC2Q9H1I8 757 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-211ENST00000466538 SLKQ9H2G2 1235 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-211ENST00000466538 KANSL2Q9H9L4 492 aa6.36□□□□□ -1.39
CDC42BPA-211ENST00000466538 FAM86C1Q9NVL1 165 aa6.36□□□□□ -1.39
CDC42BPA-211ENST00000466538 SUGT1Q9Y2Z0 365 aa6.36□□□□□ -1.39
CDC42BPA-211ENST00000466538 FHOD1Q9Y613 1164 aa6.36□□□□□ -1.39
CDC42BPA-211ENST00000466538 SHOXO15266 292 aa6.35□□□□□ -1.39
CDC42BPA-211ENST00000466538 GSC2O15499 205 aa6.35□□□□□ -1.39
CDC42BPA-211ENST00000466538 LEFTY1O75610 366 aa6.35□□□□□ -1.39
CDC42BPA-211ENST00000466538 ZNF865P0CJ78 1059 aaPredicted RBP6.35□□□□□ -1.39
CDC42BPA-211ENST00000466538 ZNF662Q6ZS27 426 aa6.35□□□□□ -1.39
CDC42BPA-211ENST00000466538 SCUBE1Q8IWY4 988 aa6.35□□□□□ -1.39
CDC42BPA-211ENST00000466538 CCDC140Q96MF4 163 aa6.35□□□□□ -1.39
CDC42BPA-211ENST00000466538 IPO9Q96P70 1041 aaKnown RBP6.35□□□□□ -1.39
CDC42BPA-211ENST00000466538 PRDM14Q9GZV8 571 aa6.35□□□□□ -1.39
CDC42BPA-211ENST00000466538 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.35□□□□□ -1.39
CDC42BPA-211ENST00000466538 AKT3Q9Y243 479 aa6.35□□□□□ -1.39
CDC42BPA-211ENST00000466538 LEMD3Q9Y2U8 911 aa6.35□□□□□ -1.39
CDC42BPA-211ENST00000466538 PTCH2Q9Y6C5 1203 aa6.35□□□□□ -1.39
CDC42BPA-211ENST00000466538 TRAV20A0A0B4J274 112 aa6.34□□□□□ -1.39
CDC42BPA-211ENST00000466538 CAPNS1P04632 268 aa6.34□□□□□ -1.39
CDC42BPA-211ENST00000466538 ITGAVP06756 1048 aa6.34□□□□□ -1.39
CDC42BPA-211ENST00000466538 ADMP35318 185 aa6.34□□□□□ -1.39
CDC42BPA-211ENST00000466538 ZNF445P59923 1031 aa6.34□□□□□ -1.39
CDC42BPA-211ENST00000466538 RASSF7Q02833 373 aa6.34□□□□□ -1.39
CDC42BPA-211ENST00000466538 CPSF6Q16630 551 aaKnown RBP eCLIP6.34□□□□□ -1.39
CDC42BPA-211ENST00000466538 DTWD2Q8NBA8 298 aa6.34□□□□□ -1.39
CDC42BPA-211ENST00000466538 MRGPRX3Q96LB0 322 aa6.34□□□□□ -1.39
CDC42BPA-211ENST00000466538 HEXIM2Q96MH2 286 aaKnown RBP6.34□□□□□ -1.39
CDC42BPA-211ENST00000466538 FEZ1Q99689 392 aa6.34□□□□□ -1.39
CDC42BPA-211ENST00000466538 AARSD1Q9BTE6 412 aaKnown RBP6.34□□□□□ -1.39
CDC42BPA-211ENST00000466538 DHRS4Q9BTZ2 278 aa6.34□□□□□ -1.39
CDC42BPA-211ENST00000466538 METTL22Q9BUU2 404 aaPredicted RBP6.34□□□□□ -1.39
CDC42BPA-211ENST00000466538 MKNK2Q9HBH9 465 aa6.34□□□□□ -1.39
CDC42BPA-211ENST00000466538 EMC9Q9Y3B6 208 aa6.34□□□□□ -1.39
CDC42BPA-211ENST00000466538 PRKAB1Q9Y478 270 aa6.34□□□□□ -1.39
CDC42BPA-211ENST00000466538 CNTNAP4Q9C0A0 1308 aa6.33□□□□□ -1.4
CDC42BPA-211ENST00000466538 LRRN2O75325 713 aa6.33□□□□□ -1.4
CDC42BPA-211ENST00000466538 H2AFB1P0C5Y9 115 aa6.33□□□□□ -1.4
CDC42BPA-211ENST00000466538 H2AFB2P0C5Z0 115 aa6.33□□□□□ -1.4
CDC42BPA-211ENST00000466538 FGFR1P11362 822 aa6.33□□□□□ -1.4
CDC42BPA-211ENST00000466538 PPP2R2AP63151 447 aa6.33□□□□□ -1.4
CDC42BPA-211ENST00000466538 RNF187Q5TA31 235 aaPredicted RBP6.33□□□□□ -1.4
CDC42BPA-211ENST00000466538 GPAT2Q6NUI2 795 aa6.33□□□□□ -1.4
CDC42BPA-211ENST00000466538 ZNF227Q86WZ6 799 aa6.33□□□□□ -1.4
CDC42BPA-211ENST00000466538 PPP1R14AQ96A00 147 aa6.33□□□□□ -1.4
CDC42BPA-211ENST00000466538 Q96M66 194 aa6.33□□□□□ -1.4
CDC42BPA-211ENST00000466538 CDC6Q99741 560 aa6.33□□□□□ -1.4
CDC42BPA-211ENST00000466538 APEX2Q9UBZ4 518 aa6.33□□□□□ -1.4
CDC42BPA-211ENST00000466538 SF3B6Q9Y3B4 125 aaKnown RBP6.33□□□□□ -1.4
CDC42BPA-211ENST00000466538 DNAJC25-GNG10A0A024R161 153 aa6.32□□□□□ -1.4
CDC42BPA-211ENST00000466538 GNAT3A8MTJ3 354 aa6.32□□□□□ -1.4
CDC42BPA-211ENST00000466538 PPP1R12AO14974 1030 aaPredicted RBP6.32□□□□□ -1.4
CDC42BPA-211ENST00000466538 SIGLEC6O43699 453 aa6.32□□□□□ -1.4
CDC42BPA-211ENST00000466538 HOXC12P31275 282 aa6.32□□□□□ -1.4
CDC42BPA-211ENST00000466538 GRB10Q13322 594 aa6.32□□□□□ -1.4
CDC42BPA-211ENST00000466538 TRIM59Q8IWR1 403 aa6.32□□□□□ -1.4
CDC42BPA-211ENST00000466538 KISS1RQ969F8 398 aaPredicted RBP6.32□□□□□ -1.4
CDC42BPA-211ENST00000466538 DBNDD2Q9BQY9 259 aa6.32□□□□□ -1.4
CDC42BPA-211ENST00000466538 GPR62Q9BZJ7 368 aa6.32□□□□□ -1.4
CDC42BPA-211ENST00000466538 ARHGEF4Q9NR80 690 aa6.32□□□□□ -1.4
CDC42BPA-211ENST00000466538 CHST7Q9NS84 486 aa6.32□□□□□ -1.4
CDC42BPA-211ENST00000466538 RFPL3O75679 317 aa6.31□□□□□ -1.4
CDC42BPA-211ENST00000466538 CBX7O95931 251 aa6.31□□□□□ -1.4
CDC42BPA-211ENST00000466538 SRFP11831 508 aa6.31□□□□□ -1.4
CDC42BPA-211ENST00000466538 GYS2P54840 703 aa6.31□□□□□ -1.4
CDC42BPA-211ENST00000466538 NFIAQ12857 509 aa6.31□□□□□ -1.4
CDC42BPA-211ENST00000466538 NMIQ13287 307 aaPredicted RBP6.31□□□□□ -1.4
CDC42BPA-211ENST00000466538 NSMFQ6X4W1 530 aa6.31□□□□□ -1.4
CDC42BPA-211ENST00000466538 MFSD4AQ8N468 514 aa6.31□□□□□ -1.4
CDC42BPA-211ENST00000466538 FBXL6Q8N531 539 aa6.31□□□□□ -1.4
CDC42BPA-211ENST00000466538 FIBCD1Q8N539 461 aa6.31□□□□□ -1.4
CDC42BPA-211ENST00000466538 ZNF655Q8N720 491 aaPredicted RBP6.31□□□□□ -1.4
CDC42BPA-211ENST00000466538 DAGLBQ8NCG7 672 aa6.31□□□□□ -1.4
CDC42BPA-211ENST00000466538 BRF1Q92994 677 aa6.31□□□□□ -1.4
CDC42BPA-211ENST00000466538 MFSD14AQ96MC6 490 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms