RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 E7EWF7 191 aa11.62□□□□□ -0.55
PMF1-204ENST00000466489 PDHXO00330 501 aa11.62□□□□□ -0.55
PMF1-204ENST00000466489 SLC27A2O14975 620 aa11.62□□□□□ -0.55
PMF1-204ENST00000466489 WDR46O15213 610 aaKnown RBP11.62□□□□□ -0.55
PMF1-204ENST00000466489 TRPA1O75762 1119 aa11.62□□□□□ -0.55
PMF1-204ENST00000466489 GUCY1A2P33402 732 aa11.62□□□□□ -0.55
PMF1-204ENST00000466489 UBE2HP62256 183 aa11.62□□□□□ -0.55
PMF1-204ENST00000466489 JAG1P78504 1218 aa11.62□□□□□ -0.55
PMF1-204ENST00000466489 NECTIN1Q15223 517 aa11.62□□□□□ -0.55
PMF1-204ENST00000466489 SHROOM1Q2M3G4 852 aaPredicted RBP11.62□□□□□ -0.55
PMF1-204ENST00000466489 CAVIN1Q6NZI2 390 aaKnown RBP11.62□□□□□ -0.55
PMF1-204ENST00000466489 GTF3C2Q8WUA4 911 aaPredicted RBP11.62□□□□□ -0.55
PMF1-204ENST00000466489 C12orf42Q96LP6 360 aa11.62□□□□□ -0.55
PMF1-204ENST00000466489 TTC14Q96N46 770 aa11.62□□□□□ -0.55
PMF1-204ENST00000466489 TANGO6Q9C0B7 1094 aa11.62□□□□□ -0.55
PMF1-204ENST00000466489 NBPF3Q9H094 633 aa11.62□□□□□ -0.55
PMF1-204ENST00000466489 TSPY26PQ9H489 355 aa11.62□□□□□ -0.55
PMF1-204ENST00000466489 VCPKMTQ9H867 229 aa11.62□□□□□ -0.55
PMF1-204ENST00000466489 RNF186Q9NXI6 227 aa11.62□□□□□ -0.55
PMF1-204ENST00000466489 CLIP2Q9UDT6 1046 aa11.62□□□□□ -0.55
PMF1-204ENST00000466489 IGKV6D-41A0A0C4DH26 115 aa11.61□□□□□ -0.55
PMF1-204ENST00000466489 USP17L15C9J2P7 530 aa11.61□□□□□ -0.55
PMF1-204ENST00000466489 USP17L13C9JLJ4 530 aa11.61□□□□□ -0.55
PMF1-204ENST00000466489 USP17L11C9JVI0 530 aa11.61□□□□□ -0.55
PMF1-204ENST00000466489 USP17L18D6R9N7 530 aa11.61□□□□□ -0.55
PMF1-204ENST00000466489 USP17L22D6RA61 530 aa11.61□□□□□ -0.55
PMF1-204ENST00000466489 USP17L17D6RBQ6 530 aa11.61□□□□□ -0.55
PMF1-204ENST00000466489 USP17L19D6RCP7 530 aa11.61□□□□□ -0.55
PMF1-204ENST00000466489 USP17L20D6RJB6 530 aa11.61□□□□□ -0.55
PMF1-204ENST00000466489 IGF2BP3O00425 579 aaKnown RBP eCLIP11.61□□□□□ -0.55
PMF1-204ENST00000466489 HMGB1P09429 215 aaKnown RBP11.61□□□□□ -0.55
PMF1-204ENST00000466489 HSPA1AP0DMV8 641 aaKnown RBP11.61□□□□□ -0.55
PMF1-204ENST00000466489 HSPA1BP0DMV9 641 aaKnown RBP11.61□□□□□ -0.55
PMF1-204ENST00000466489 TOP1P11387 765 aaKnown RBP11.61□□□□□ -0.55
PMF1-204ENST00000466489 CTCFP49711 727 aaPredicted RBP11.61□□□□□ -0.55
PMF1-204ENST00000466489 USP17L24Q0WX57 530 aa11.61□□□□□ -0.55
PMF1-204ENST00000466489 HSP90AA2PQ14568 343 aaPredicted RBP11.61□□□□□ -0.55
PMF1-204ENST00000466489 ACER1Q8TDN7 264 aa11.61□□□□□ -0.55
PMF1-204ENST00000466489 ZSCAN10Q96SZ4 725 aaPredicted RBP11.61□□□□□ -0.55
PMF1-204ENST00000466489 CYP46A1Q9Y6A2 500 aa11.61□□□□□ -0.55
PMF1-204ENST00000466489 VCAM1P19320 739 aa11.6□□□□□ -0.55
PMF1-204ENST00000466489 HOXA7P31268 230 aaPredicted RBP11.6□□□□□ -0.55
PMF1-204ENST00000466489 GCLCP48506 637 aaPredicted RBP11.6□□□□□ -0.55
PMF1-204ENST00000466489 ARHGEF6Q15052 776 aa11.6□□□□□ -0.55
PMF1-204ENST00000466489 CCDC183Q5T5S1 534 aa11.6□□□□□ -0.55
PMF1-204ENST00000466489 DGKHQ86XP1 1220 aa11.6□□□□□ -0.55
PMF1-204ENST00000466489 CLEC10AQ8IUN9 316 aa11.6□□□□□ -0.55
PMF1-204ENST00000466489 LRRC47Q8N1G4 583 aaKnown RBP11.6□□□□□ -0.55
PMF1-204ENST00000466489 GMCL1P1Q8NEA9 526 aa11.6□□□□□ -0.55
PMF1-204ENST00000466489 MKL1Q969V6 931 aa11.6□□□□□ -0.55
PMF1-204ENST00000466489 PTPN18Q99952 460 aa11.6□□□□□ -0.55
PMF1-204ENST00000466489 MTA3Q9BTC8 594 aa11.6□□□□□ -0.55
PMF1-204ENST00000466489 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.6□□□□□ -0.55
PMF1-204ENST00000466489 CFHR5Q9BXR6 569 aa11.6□□□□□ -0.55
PMF1-204ENST00000466489 PDCL3Q9H2J4 239 aa11.6□□□□□ -0.55
PMF1-204ENST00000466489 KAT14Q9H8E8 782 aa11.6□□□□□ -0.55
PMF1-204ENST00000466489 INCENPQ9NQS7 918 aa11.6□□□□□ -0.55
PMF1-204ENST00000466489 ZSWIM5Q9P217 1185 aa11.6□□□□□ -0.55
PMF1-204ENST00000466489 SMC3Q9UQE7 1217 aa11.6□□□□□ -0.55
PMF1-204ENST00000466489 A0A1W2PRG0 241 aa11.59□□□□□ -0.55
PMF1-204ENST00000466489 F5H6K3 240 aa11.59□□□□□ -0.55
PMF1-204ENST00000466489 IFIT3O14879 490 aaKnown RBP11.59□□□□□ -0.55
PMF1-204ENST00000466489 SLC1A4P43007 532 aa11.59□□□□□ -0.55
PMF1-204ENST00000466489 FGD1P98174 961 aa11.59□□□□□ -0.55
PMF1-204ENST00000466489 KLRC3Q07444 240 aa11.59□□□□□ -0.55
PMF1-204ENST00000466489 CRHR2Q13324 411 aa11.59□□□□□ -0.55
PMF1-204ENST00000466489 KIF22Q14807 665 aa11.59□□□□□ -0.55
PMF1-204ENST00000466489 NOM1Q5C9Z4 860 aaKnown RBP11.59□□□□□ -0.55
PMF1-204ENST00000466489 TREML2Q5T2D2 321 aa11.59□□□□□ -0.55
PMF1-204ENST00000466489 IFIT1BQ5T764 474 aaKnown RBP11.59□□□□□ -0.55
PMF1-204ENST00000466489 ATL3Q6DD88 541 aa11.59□□□□□ -0.55
PMF1-204ENST00000466489 SPICE1Q8N0Z3 855 aa11.59□□□□□ -0.55
PMF1-204ENST00000466489 TMTC2Q8N394 836 aa11.59□□□□□ -0.55
PMF1-204ENST00000466489 RGS22Q8NE09 1264 aa11.59□□□□□ -0.55
PMF1-204ENST00000466489 TMEM87BQ96K49 555 aa11.59□□□□□ -0.55
PMF1-204ENST00000466489 NEK1Q96PY6 1258 aa11.59□□□□□ -0.55
PMF1-204ENST00000466489 SCAND2PQ9GZW5 306 aaPredicted RBP11.59□□□□□ -0.55
PMF1-204ENST00000466489 RPAP3Q9H6T3 665 aaPredicted RBP11.59□□□□□ -0.55
PMF1-204ENST00000466489 RRAGDQ9NQL2 400 aaPredicted RBP11.59□□□□□ -0.55
PMF1-204ENST00000466489 IL17RBQ9NRM6 502 aa11.59□□□□□ -0.55
PMF1-204ENST00000466489 EMILIN3Q9NT22 766 aa11.59□□□□□ -0.55
PMF1-204ENST00000466489 HOXC10Q9NYD6 342 aa11.59□□□□□ -0.55
PMF1-204ENST00000466489 CTDP1Q9Y5B0 961 aaPredicted RBP11.59□□□□□ -0.55
PMF1-204ENST00000466489 TNKSO95271 1327 aa11.59□□□□□ -0.55
PMF1-204ENST00000466489 NMT2O60551 498 aa11.58□□□□□ -0.56
PMF1-204ENST00000466489 TLR2O60603 784 aa11.58□□□□□ -0.56
PMF1-204ENST00000466489 FLOT1O75955 427 aa11.58□□□□□ -0.56
PMF1-204ENST00000466489 CD2BP2O95400 341 aaKnown RBP11.58□□□□□ -0.56
PMF1-204ENST00000466489 ZSCAN22P10073 491 aaPredicted RBP11.58□□□□□ -0.56
PMF1-204ENST00000466489 IKQ13123 557 aaPredicted RBP11.58□□□□□ -0.56
PMF1-204ENST00000466489 MOGSQ13724 837 aa11.58□□□□□ -0.56
PMF1-204ENST00000466489 COG2Q14746 738 aa11.58□□□□□ -0.56
PMF1-204ENST00000466489 WTAPQ15007 396 aa11.58□□□□□ -0.56
PMF1-204ENST00000466489 CCDC96Q2M329 555 aa11.58□□□□□ -0.56
PMF1-204ENST00000466489 TSGA10IPQ3SY00 556 aa11.58□□□□□ -0.56
PMF1-204ENST00000466489 TMEM67Q5HYA8 995 aa11.58□□□□□ -0.56
PMF1-204ENST00000466489 SLFN13Q68D06 897 aa11.58□□□□□ -0.56
PMF1-204ENST00000466489 GPAT2Q6NUI2 795 aa11.58□□□□□ -0.56
PMF1-204ENST00000466489 CCAR1Q8IX12 1150 aaKnown RBP11.58□□□□□ -0.56
PMF1-204ENST00000466489 KCNB2Q92953 911 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms