RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 MAPTP10636 758 aaKnown RBP4.31□□□□□ -1.72
SORT1-202ENST00000466471 ITGB7P26010 798 aa4.31□□□□□ -1.72
SORT1-202ENST00000466471 HMGB2P26583 209 aaKnown RBP4.31□□□□□ -1.72
SORT1-202ENST00000466471 ADH6P28332 368 aa4.31□□□□□ -1.72
SORT1-202ENST00000466471 PCBP4P57723 403 aaKnown RBP4.31□□□□□ -1.72
SORT1-202ENST00000466471 TNP2Q05952 138 aa4.31□□□□□ -1.72
SORT1-202ENST00000466471 DALRD3Q5D0E6 543 aaKnown RBP4.31□□□□□ -1.72
SORT1-202ENST00000466471 KIAA0319Q5VV43 1072 aa4.31□□□□□ -1.72
SORT1-202ENST00000466471 NUTM2GQ5VZR2 741 aa4.31□□□□□ -1.72
SORT1-202ENST00000466471 SV2BQ7L1I2 683 aa4.31□□□□□ -1.72
SORT1-202ENST00000466471 FCHSD1Q86WN1 690 aa4.31□□□□□ -1.72
SORT1-202ENST00000466471 NGEFQ8N5V2 710 aa4.31□□□□□ -1.72
SORT1-202ENST00000466471 NGDNQ8NEJ9 315 aaKnown RBP4.31□□□□□ -1.72
SORT1-202ENST00000466471 RHPN1Q8TCX5 695 aa4.31□□□□□ -1.72
SORT1-202ENST00000466471 C7orf43Q8WVR3 580 aa4.31□□□□□ -1.72
SORT1-202ENST00000466471 TMEM74Q96NL1 305 aa4.31□□□□□ -1.72
SORT1-202ENST00000466471 BCO2Q9BYV7 579 aa4.31□□□□□ -1.72
SORT1-202ENST00000466471 KBTBD4Q9NVX7 518 aa4.31□□□□□ -1.72
SORT1-202ENST00000466471 NOP53Q9NZM5 478 aaKnown RBP4.31□□□□□ -1.72
SORT1-202ENST00000466471 PIM2Q9P1W9 311 aa4.31□□□□□ -1.72
SORT1-202ENST00000466471 RAPGEFL1Q9UHV5 662 aa4.31□□□□□ -1.72
SORT1-202ENST00000466471 RCAN3Q9UKA8 241 aa4.31□□□□□ -1.72
SORT1-202ENST00000466471 ABT1Q9ULW3 272 aaKnown RBP4.31□□□□□ -1.72
SORT1-202ENST00000466471 FAM208AQ9UK61 1670 aaKnown RBP4.31□□□□□ -1.72
SORT1-202ENST00000466471 IQCA1LA6NCM1 817 aa4.3□□□□□ -1.72
SORT1-202ENST00000466471 INPP5BP32019 993 aa4.3□□□□□ -1.72
SORT1-202ENST00000466471 EIF4A3P38919 411 aaKnown RBP4.3□□□□□ -1.72
SORT1-202ENST00000466471 IDH3AP50213 366 aa4.3□□□□□ -1.72
SORT1-202ENST00000466471 TERF1P54274 439 aa4.3□□□□□ -1.72
SORT1-202ENST00000466471 RASA3Q14644 834 aa4.3□□□□□ -1.72
SORT1-202ENST00000466471 GLIPR1L2Q4G1C9 344 aa4.3□□□□□ -1.72
SORT1-202ENST00000466471 L1TD1Q5T7N2 865 aaKnown RBP4.3□□□□□ -1.72
SORT1-202ENST00000466471 SH3PXD2AQ5TCZ1 1133 aa4.3□□□□□ -1.72
SORT1-202ENST00000466471 SMIM5Q71RC9 77 aa4.3□□□□□ -1.72
SORT1-202ENST00000466471 CENPQQ7L2Z9 268 aaPredicted RBP4.3□□□□□ -1.72
SORT1-202ENST00000466471 NLRP13Q86W25 1043 aa4.3□□□□□ -1.72
SORT1-202ENST00000466471 NLRP8Q86W28 1048 aa4.3□□□□□ -1.72
SORT1-202ENST00000466471 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.3□□□□□ -1.72
SORT1-202ENST00000466471 TRMT2AQ8IZ69 625 aaKnown RBP4.3□□□□□ -1.72
SORT1-202ENST00000466471 FAM9BQ8IZU0 186 aa4.3□□□□□ -1.72
SORT1-202ENST00000466471 SYNPOQ8N3V7 929 aa4.3□□□□□ -1.72
SORT1-202ENST00000466471 TRPM4Q8TD43 1214 aa4.3□□□□□ -1.72
SORT1-202ENST00000466471 EPS8L3Q8TE67 593 aaKnown RBP4.3□□□□□ -1.72
SORT1-202ENST00000466471 FRAT1Q92837 279 aaPredicted RBP4.3□□□□□ -1.72
SORT1-202ENST00000466471 TRIM11Q96F44 468 aa4.3□□□□□ -1.72
SORT1-202ENST00000466471 SRPK1Q96SB4 655 aaKnown RBP4.3□□□□□ -1.72
SORT1-202ENST00000466471 POLR3GLQ9BT43 218 aa4.3□□□□□ -1.72
SORT1-202ENST00000466471 PLVAPQ9BX97 442 aa4.3□□□□□ -1.72
SORT1-202ENST00000466471 KRTAP4-8Q9BYQ9 185 aa4.3□□□□□ -1.72
SORT1-202ENST00000466471 TAF1DQ9H5J8 278 aaPredicted RBP4.3□□□□□ -1.72
SORT1-202ENST00000466471 ELP3Q9H9T3 547 aa4.3□□□□□ -1.72
SORT1-202ENST00000466471 NPHS2Q9NP85 383 aa4.3□□□□□ -1.72
SORT1-202ENST00000466471 PCDH12Q9NPG4 1184 aa4.3□□□□□ -1.72
SORT1-202ENST00000466471 SAGE1Q9NXZ1 904 aa4.3□□□□□ -1.72
SORT1-202ENST00000466471 PRKAG3Q9UGI9 489 aa4.3□□□□□ -1.72
SORT1-202ENST00000466471 PRR12Q9ULL5 1215 aa4.3□□□□□ -1.72
SORT1-202ENST00000466471 MSRB2Q9Y3D2 182 aa4.3□□□□□ -1.72
SORT1-202ENST00000466471 COL4A3BPQ9Y5P4 624 aa4.3□□□□□ -1.72
SORT1-202ENST00000466471 NFAT5O94916 1531 aa4.3□□□□□ -1.72
SORT1-202ENST00000466471 ZDBF2Q9HCK1 2354 aa4.29□□□□□ -1.72
SORT1-202ENST00000466471 NRXN2Q9P2S2 1712 aa4.29□□□□□ -1.72
SORT1-202ENST00000466471 USP47Q96K76 1375 aa4.29□□□□□ -1.72
SORT1-202ENST00000466471 ADGRF5Q8IZF2 1346 aa4.29□□□□□ -1.72
SORT1-202ENST00000466471 ZNF521Q96K83 1311 aa4.29□□□□□ -1.72
SORT1-202ENST00000466471 ADGRB1O14514 1584 aa4.29□□□□□ -1.72
SORT1-202ENST00000466471 EDN3P14138 238 aa4.29□□□□□ -1.72
SORT1-202ENST00000466471 TATP17735 454 aaPredicted RBP4.29□□□□□ -1.72
SORT1-202ENST00000466471 NASPP49321 788 aaPredicted RBP4.29□□□□□ -1.72
SORT1-202ENST00000466471 PKN2Q16513 984 aaKnown RBP4.29□□□□□ -1.72
SORT1-202ENST00000466471 HSP90AB2PQ58FF8 381 aa4.29□□□□□ -1.72
SORT1-202ENST00000466471 NXPE4Q6UWF7 544 aa4.29□□□□□ -1.72
SORT1-202ENST00000466471 ANKS3Q6ZW76 656 aa4.29□□□□□ -1.72
SORT1-202ENST00000466471 FILIP1Q7Z7B0 1213 aa4.29□□□□□ -1.72
SORT1-202ENST00000466471 CCDC84Q86UT8 332 aaPredicted RBP4.29□□□□□ -1.72
SORT1-202ENST00000466471 C3orf58Q8NDZ4 430 aa4.29□□□□□ -1.72
SORT1-202ENST00000466471 OR6P1Q8NGX9 317 aa4.29□□□□□ -1.72
SORT1-202ENST00000466471 EXOC6Q8TAG9 804 aa4.29□□□□□ -1.72
SORT1-202ENST00000466471 APPBP2Q92624 585 aa4.29□□□□□ -1.72
SORT1-202ENST00000466471 HHIPL1Q96JK4 782 aa4.29□□□□□ -1.72
SORT1-202ENST00000466471 SUSD3Q96L08 255 aa4.29□□□□□ -1.72
SORT1-202ENST00000466471 RHOVQ96L33 236 aa4.29□□□□□ -1.72
SORT1-202ENST00000466471 RNPC3Q96LT9 517 aaKnown RBP4.29□□□□□ -1.72
SORT1-202ENST00000466471 ZIC5Q96T25 663 aa4.29□□□□□ -1.72
SORT1-202ENST00000466471 CEP44Q9C0F1 390 aa4.29□□□□□ -1.72
SORT1-202ENST00000466471 PRO3102Q9H379 93 aa4.29□□□□□ -1.72
SORT1-202ENST00000466471 NEUROD4Q9HD90 331 aa4.29□□□□□ -1.72
SORT1-202ENST00000466471 DDX21Q9NR30 783 aaKnown RBP eCLIP4.29□□□□□ -1.72
SORT1-202ENST00000466471 IFT57Q9NWB7 429 aa4.29□□□□□ -1.72
SORT1-202ENST00000466471 MAGEC2Q9UBF1 373 aaPredicted RBP4.29□□□□□ -1.72
SORT1-202ENST00000466471 FOXD3Q9UJU5 478 aaPredicted RBP4.29□□□□□ -1.72
SORT1-202ENST00000466471 TTF2Q9UNY4 1162 aaKnown RBP4.29□□□□□ -1.72
SORT1-202ENST00000466471 STXBP5LQ9Y2K9 1186 aa4.29□□□□□ -1.72
SORT1-202ENST00000466471 R3HCC1Q9Y3T6 440 aaKnown RBP4.29□□□□□ -1.72
SORT1-202ENST00000466471 PARP3Q9Y6F1 533 aa4.29□□□□□ -1.72
SORT1-202ENST00000466471 GJA3Q9Y6H8 435 aa4.29□□□□□ -1.72
SORT1-202ENST00000466471 BCORQ6W2J9 1755 aa4.29□□□□□ -1.72
SORT1-202ENST00000466471 NUP155O75694 1391 aa4.28□□□□□ -1.72
SORT1-202ENST00000466471 EPG5Q9HCE0 2579 aa4.28□□□□□ -1.72
SORT1-202ENST00000466471 ITGB4P16144 1822 aa4.28□□□□□ -1.72
SORT1-202ENST00000466471 ARFGEF2Q9Y6D5 1785 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms