RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 FUT2Q10981 343 aa14.04□□□□□ -0.16
VPS16-206ENST00000466415 IKQ13123 557 aaPredicted RBP14.04□□□□□ -0.16
VPS16-206ENST00000466415 GNL2Q13823 731 aaKnown RBP14.04□□□□□ -0.16
VPS16-206ENST00000466415 ZYXQ15942 572 aaKnown RBP14.04□□□□□ -0.16
VPS16-206ENST00000466415 NOL9Q5SY16 702 aaKnown RBP14.04□□□□□ -0.16
VPS16-206ENST00000466415 KCTD1Q719H9 257 aa14.04□□□□□ -0.16
VPS16-206ENST00000466415 CCDC84Q86UT8 332 aaPredicted RBP14.04□□□□□ -0.16
VPS16-206ENST00000466415 SIAH1Q8IUQ4 282 aa14.04□□□□□ -0.16
VPS16-206ENST00000466415 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.04□□□□□ -0.16
VPS16-206ENST00000466415 ACER1Q8TDN7 264 aa14.04□□□□□ -0.16
VPS16-206ENST00000466415 PIBF1Q8WXW3 757 aa14.04□□□□□ -0.16
VPS16-206ENST00000466415 ZKSCAN4Q969J2 545 aaPredicted RBP14.04□□□□□ -0.16
VPS16-206ENST00000466415 RRP36Q96EU6 259 aaKnown RBP14.04□□□□□ -0.16
VPS16-206ENST00000466415 GMCL1Q96IK5 515 aa14.04□□□□□ -0.16
VPS16-206ENST00000466415 SPZ1Q9BXG8 430 aa14.04□□□□□ -0.16
VPS16-206ENST00000466415 FZD1Q9UP38 647 aa14.04□□□□□ -0.16
VPS16-206ENST00000466415 ATP6V1DQ9Y5K8 247 aa14.04□□□□□ -0.16
VPS16-206ENST00000466415 V9GY48 417 aaPredicted RBP14.04□□□□□ -0.16
VPS16-206ENST00000466415 A0A1W2PRG0 241 aa14.03□□□□□ -0.16
VPS16-206ENST00000466415 USP2O75604 605 aaPredicted RBP14.03□□□□□ -0.16
VPS16-206ENST00000466415 BMP3P12645 472 aa14.03□□□□□ -0.16
VPS16-206ENST00000466415 SMARCA1P28370 1054 aa14.03□□□□□ -0.16
VPS16-206ENST00000466415 USP14P54578 494 aa14.03□□□□□ -0.16
VPS16-206ENST00000466415 MAP3K9P80192 1104 aa14.03□□□□□ -0.16
VPS16-206ENST00000466415 SAFBQ15424 915 aaKnown RBP eCLIP14.03□□□□□ -0.16
VPS16-206ENST00000466415 MAP1SQ66K74 1059 aaPredicted RBP14.03□□□□□ -0.16
VPS16-206ENST00000466415 MCTP1Q6DN14 999 aa14.03□□□□□ -0.16
VPS16-206ENST00000466415 DLK2Q6UY11 383 aa14.03□□□□□ -0.16
VPS16-206ENST00000466415 ARMC9Q7Z3E5 817 aa14.03□□□□□ -0.16
VPS16-206ENST00000466415 HOMER1Q86YM7 354 aa14.03□□□□□ -0.16
VPS16-206ENST00000466415 VCPKMTQ9H867 229 aa14.03□□□□□ -0.16
VPS16-206ENST00000466415 NMRK2Q9NPI5 230 aa14.03□□□□□ -0.16
VPS16-206ENST00000466415 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.03□□□□□ -0.16
VPS16-206ENST00000466415 ZDHHC9Q9Y397 364 aa14.03□□□□□ -0.16
VPS16-206ENST00000466415 hCG_1642624A0A1W2PR95 340 aa14.02□□□□□ -0.17
VPS16-206ENST00000466415 POTEIP0CG38 1075 aa14.02□□□□□ -0.17
VPS16-206ENST00000466415 POTEJP0CG39 1038 aa14.02□□□□□ -0.17
VPS16-206ENST00000466415 SCG2P13521 617 aa14.02□□□□□ -0.17
VPS16-206ENST00000466415 SPICE1Q8N0Z3 855 aa14.02□□□□□ -0.17
VPS16-206ENST00000466415 RGS22Q8NE09 1264 aa14.02□□□□□ -0.17
VPS16-206ENST00000466415 FBXO18Q8NFZ0 1043 aa14.02□□□□□ -0.17
VPS16-206ENST00000466415 AIFM3Q96NN9 605 aa14.02□□□□□ -0.17
VPS16-206ENST00000466415 UBA5Q9GZZ9 404 aa14.02□□□□□ -0.17
VPS16-206ENST00000466415 ZNF408Q9H9D4 720 aa14.02□□□□□ -0.17
VPS16-206ENST00000466415 VAT1LQ9HCJ6 419 aa14.02□□□□□ -0.17
VPS16-206ENST00000466415 BRMS1Q9HCU9 246 aa14.02□□□□□ -0.17
VPS16-206ENST00000466415 USP17L10C9JJH3 530 aa14.01□□□□□ -0.17
VPS16-206ENST00000466415 GOLGA6L22H0YM25 854 aa14.01□□□□□ -0.17
VPS16-206ENST00000466415 PTPRAP18433 802 aa14.01□□□□□ -0.17
VPS16-206ENST00000466415 VGLL4Q14135 290 aa14.01□□□□□ -0.17
VPS16-206ENST00000466415 PFKFB3Q16875 520 aaPredicted RBP14.01□□□□□ -0.17
VPS16-206ENST00000466415 KRT40Q6A162 431 aa14.01□□□□□ -0.17
VPS16-206ENST00000466415 OTUD7BQ6GQQ9 843 aa14.01□□□□□ -0.17
VPS16-206ENST00000466415 HEATR3Q7Z4Q2 680 aa14.01□□□□□ -0.17
VPS16-206ENST00000466415 FERMT3Q86UX7 667 aa14.01□□□□□ -0.17
VPS16-206ENST00000466415 ANKRD13AQ8IZ07 590 aa14.01□□□□□ -0.17
VPS16-206ENST00000466415 ZNF280CQ8ND82 737 aa14.01□□□□□ -0.17
VPS16-206ENST00000466415 CCDC148Q8NFR7 591 aa14.01□□□□□ -0.17
VPS16-206ENST00000466415 LPAR1Q92633 364 aa14.01□□□□□ -0.17
VPS16-206ENST00000466415 NUP88Q99567 741 aaPredicted RBP14.01□□□□□ -0.17
VPS16-206ENST00000466415 WDR18Q9BV38 432 aa14.01□□□□□ -0.17
VPS16-206ENST00000466415 KIAA1683Q9H0B3 1180 aa14.01□□□□□ -0.17
VPS16-206ENST00000466415 CPVLQ9H3G5 476 aa14.01□□□□□ -0.17
VPS16-206ENST00000466415 ZSCAN16Q9H4T2 348 aaPredicted RBP14.01□□□□□ -0.17
VPS16-206ENST00000466415 SRCAPQ6ZRS2 3230 aa14.01□□□□□ -0.17
VPS16-206ENST00000466415 TMEM232C9JQI7 657 aa14□□□□□ -0.17
VPS16-206ENST00000466415 UBE2Q2LH0YL09 131 aa14□□□□□ -0.17
VPS16-206ENST00000466415 WDR46O15213 610 aaKnown RBP14□□□□□ -0.17
VPS16-206ENST00000466415 CYTH3O43739 400 aa14□□□□□ -0.17
VPS16-206ENST00000466415 SLC16A2P36021 539 aa14□□□□□ -0.17
VPS16-206ENST00000466415 STAT2P52630 851 aa14□□□□□ -0.17
VPS16-206ENST00000466415 SPP2Q13103 211 aa14□□□□□ -0.17
VPS16-206ENST00000466415 MTMR2Q13614 643 aa14□□□□□ -0.17
VPS16-206ENST00000466415 PKN1Q16512 942 aa14□□□□□ -0.17
VPS16-206ENST00000466415 FOXD4L6Q3SYB3 417 aaPredicted RBP14□□□□□ -0.17
VPS16-206ENST00000466415 FAM83BQ5T0W9 1011 aa14□□□□□ -0.17
VPS16-206ENST00000466415 SYDE2Q5VT97 1194 aa14□□□□□ -0.17
VPS16-206ENST00000466415 TTBK2Q6IQ55 1244 aa14□□□□□ -0.17
VPS16-206ENST00000466415 FOXD4L3Q6VB84 417 aaPredicted RBP14□□□□□ -0.17
VPS16-206ENST00000466415 CCDC12Q8WUD4 166 aaPredicted RBP14□□□□□ -0.17
VPS16-206ENST00000466415 PIGSQ96S52 555 aa14□□□□□ -0.17
VPS16-206ENST00000466415 RIOX1Q9H6W3 641 aa14□□□□□ -0.17
VPS16-206ENST00000466415 VPS54Q9P1Q0 977 aa14□□□□□ -0.17
VPS16-206ENST00000466415 SNCAIPQ9Y6H5 919 aa14□□□□□ -0.17
VPS16-206ENST00000466415 ZHX2Q9Y6X8 837 aa14□□□□□ -0.17
VPS16-206ENST00000466415 POLR2AP24928 1970 aaKnown RBP14□□□□□ -0.17
VPS16-206ENST00000466415 UTRNP46939 3433 aa13.99□□□□□ -0.17
VPS16-206ENST00000466415 TRIM75PA6NK02 468 aa13.99□□□□□ -0.17
VPS16-206ENST00000466415 hCG_1984214I3L0E3 225 aa13.99□□□□□ -0.17
VPS16-206ENST00000466415 TRAF5O00463 557 aa13.99□□□□□ -0.17
VPS16-206ENST00000466415 NLRP5P59047 1200 aa13.99□□□□□ -0.17
VPS16-206ENST00000466415 RESTQ13127 1097 aa13.99□□□□□ -0.17
VPS16-206ENST00000466415 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.99□□□□□ -0.17
VPS16-206ENST00000466415 FAM160B2Q86V87 743 aa13.99□□□□□ -0.17
VPS16-206ENST00000466415 ADGRF4Q8IZF3 695 aa13.99□□□□□ -0.17
VPS16-206ENST00000466415 ZNF713Q8N859 430 aaPredicted RBP13.99□□□□□ -0.17
VPS16-206ENST00000466415 CHURC1Q8WUH1 139 aa13.99□□□□□ -0.17
VPS16-206ENST00000466415 GPKOWQ92917 476 aaPredicted RBP eCLIP13.99□□□□□ -0.17
VPS16-206ENST00000466415 ELP3Q9H9T3 547 aa13.99□□□□□ -0.17
VPS16-206ENST00000466415 GJB4Q9NTQ9 266 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms