RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 SLC44A5Q8NCS7 719 aa17.56■□□□□ 0.4
CXCR4-203ENST00000466288 LENG1Q96BZ8 264 aaPredicted RBP17.56■□□□□ 0.4
CXCR4-203ENST00000466288 EAF2Q96CJ1 260 aaPredicted RBP17.56■□□□□ 0.4
CXCR4-203ENST00000466288 ASB2Q96Q27 587 aa17.56■□□□□ 0.4
CXCR4-203ENST00000466288 SLC25A27O95847 323 aa17.56■□□□□ 0.4
CXCR4-203ENST00000466288 TIMP1P01033 207 aa17.56■□□□□ 0.4
CXCR4-203ENST00000466288 PGK2P07205 417 aa17.56■□□□□ 0.4
CXCR4-203ENST00000466288 PBX2P40425 430 aa17.56■□□□□ 0.4
CXCR4-203ENST00000466288 ZNF792Q3KQV3 632 aa17.56■□□□□ 0.4
CXCR4-203ENST00000466288 AKNAD1Q5T1N1 836 aa17.56■□□□□ 0.4
CXCR4-203ENST00000466288 TMEM179Q6ZVK1 233 aa17.56■□□□□ 0.4
CXCR4-203ENST00000466288 C16orf59Q7L2K0 433 aa17.56■□□□□ 0.4
CXCR4-203ENST00000466288 SPICE1Q8N0Z3 855 aa17.56■□□□□ 0.4
CXCR4-203ENST00000466288 PPM1EQ8WY54 764 aa17.56■□□□□ 0.4
CXCR4-203ENST00000466288 TSEN34Q9BSV6 310 aaKnown RBP17.56■□□□□ 0.4
CXCR4-203ENST00000466288 PBX4Q9BYU1 374 aa17.56■□□□□ 0.4
CXCR4-203ENST00000466288 TBX21Q9UL17 535 aa17.56■□□□□ 0.4
CXCR4-203ENST00000466288 ADAMTS5Q9UNA0 930 aa17.56■□□□□ 0.4
CXCR4-203ENST00000466288 DIS3Q9Y2L1 958 aaKnown RBP17.56■□□□□ 0.4
CXCR4-203ENST00000466288 NOP58Q9Y2X3 529 aaKnown RBP17.56■□□□□ 0.4
CXCR4-203ENST00000466288 GRXCR1A8MXD5 290 aa17.55■□□□□ 0.4
CXCR4-203ENST00000466288 DCDC2CA8MYV0 355 aa17.55■□□□□ 0.4
CXCR4-203ENST00000466288 IPO8O15397 1037 aaKnown RBP17.55■□□□□ 0.4
CXCR4-203ENST00000466288 AKR1A1P14550 325 aa17.55■□□□□ 0.4
CXCR4-203ENST00000466288 ACLYP53396 1101 aa17.55■□□□□ 0.4
CXCR4-203ENST00000466288 ATP8B2P98198 1209 aa17.55■□□□□ 0.4
CXCR4-203ENST00000466288 RASIP1Q5U651 963 aa17.55■□□□□ 0.4
CXCR4-203ENST00000466288 GAS2L1Q99501 681 aaPredicted RBP17.55■□□□□ 0.4
CXCR4-203ENST00000466288 MMP19Q99542 508 aa17.55■□□□□ 0.4
CXCR4-203ENST00000466288 STARD7Q9NQZ5 370 aa17.55■□□□□ 0.4
CXCR4-203ENST00000466288 MCM9Q9NXL9 1143 aa17.55■□□□□ 0.4
CXCR4-203ENST00000466288 THEGQ9P2T0 379 aa17.55■□□□□ 0.4
CXCR4-203ENST00000466288 TMX2Q9Y320 296 aa17.55■□□□□ 0.4
CXCR4-203ENST00000466288 BCAR3O75815 825 aa17.54■□□□□ 0.4
CXCR4-203ENST00000466288 MFSD5Q6N075 450 aa17.54■□□□□ 0.4
CXCR4-203ENST00000466288 CLEC10AQ8IUN9 316 aa17.54■□□□□ 0.4
CXCR4-203ENST00000466288 KLHDC9Q8NEP7 349 aa17.54■□□□□ 0.4
CXCR4-203ENST00000466288 ADAMTS19Q8TE59 1207 aa17.54■□□□□ 0.4
CXCR4-203ENST00000466288 CLUAP1Q96AJ1 413 aa17.54■□□□□ 0.4
CXCR4-203ENST00000466288 PRDM12Q9H4Q4 367 aa17.54■□□□□ 0.4
CXCR4-203ENST00000466288 VCPKMTQ9H867 229 aa17.54■□□□□ 0.4
CXCR4-203ENST00000466288 MAGEB6P1A0A0J9YX57 407 aa17.53■□□□□ 0.4
CXCR4-203ENST00000466288 WDR46O15213 610 aaKnown RBP17.53■□□□□ 0.4
CXCR4-203ENST00000466288 PLA2G5P39877 138 aa17.53■□□□□ 0.4
CXCR4-203ENST00000466288 ADGRE1Q14246 886 aa17.53■□□□□ 0.4
CXCR4-203ENST00000466288 TMEM240Q5SV17 173 aa17.53■□□□□ 0.4
CXCR4-203ENST00000466288 CCSAPQ6IQ19 270 aaPredicted RBP17.53■□□□□ 0.4
CXCR4-203ENST00000466288 SAMD1Q6SPF0 538 aaPredicted RBP17.53■□□□□ 0.4
CXCR4-203ENST00000466288 RIOX2Q8IUF8 465 aa17.53■□□□□ 0.4
CXCR4-203ENST00000466288 NUP133Q8WUM0 1156 aa17.53■□□□□ 0.4
CXCR4-203ENST00000466288 SYNRGQ9UMZ2 1314 aa17.53■□□□□ 0.4
CXCR4-203ENST00000466288 SMCHD1A6NHR9 2005 aa17.53■□□□□ 0.4
CXCR4-203ENST00000466288 MOXD2PA6NHM9 499 aa17.52■□□□□ 0.4
CXCR4-203ENST00000466288 CYP2D6P10635 497 aa17.52■□□□□ 0.4
CXCR4-203ENST00000466288 KCTD2Q14681 263 aa17.52■□□□□ 0.4
CXCR4-203ENST00000466288 CRNKL1Q9BZJ0 848 aaKnown RBP17.52■□□□□ 0.4
CXCR4-203ENST00000466288 ARHGEF10LQ9HCE6 1279 aa17.52■□□□□ 0.4
CXCR4-203ENST00000466288 DCP1AQ9NPI6 582 aaPredicted RBP17.52■□□□□ 0.4
CXCR4-203ENST00000466288 AKR1B1P15121 316 aa17.51■□□□□ 0.39
CXCR4-203ENST00000466288 CDK7P50613 346 aa17.51■□□□□ 0.39
CXCR4-203ENST00000466288 MRPS5P82675 430 aaKnown RBP17.51■□□□□ 0.39
CXCR4-203ENST00000466288 ICA1Q05084 483 aa17.51■□□□□ 0.39
CXCR4-203ENST00000466288 PPIGQ13427 754 aaKnown RBP eCLIP17.51■□□□□ 0.39
CXCR4-203ENST00000466288 KCNA10Q16322 511 aa17.51■□□□□ 0.39
CXCR4-203ENST00000466288 CCDC129Q6ZRS4 1044 aa17.51■□□□□ 0.39
CXCR4-203ENST00000466288 TMEM57Q8N5G2 664 aa17.51■□□□□ 0.39
CXCR4-203ENST00000466288 SDR42E1Q8WUS8 393 aa17.51■□□□□ 0.39
CXCR4-203ENST00000466288 FRAT1Q92837 279 aaPredicted RBP17.51■□□□□ 0.39
CXCR4-203ENST00000466288 UHRF1Q96T88 793 aaPredicted RBP17.51■□□□□ 0.39
CXCR4-203ENST00000466288 SH2D4AQ9H788 454 aa17.51■□□□□ 0.39
CXCR4-203ENST00000466288 FBXO28Q9NVF7 368 aa17.51■□□□□ 0.39
CXCR4-203ENST00000466288 SWAP70Q9UH65 585 aa17.51■□□□□ 0.39
CXCR4-203ENST00000466288 ZNF214Q9UL59 606 aaPredicted RBP17.51■□□□□ 0.39
CXCR4-203ENST00000466288 STAT3P40763 770 aa17.5■□□□□ 0.39
CXCR4-203ENST00000466288 PPP4R3CPQ6ZMV5 832 aa17.5■□□□□ 0.39
CXCR4-203ENST00000466288 REPS2Q8NFH8 660 aa17.5■□□□□ 0.39
CXCR4-203ENST00000466288 DYNLL2Q96FJ2 89 aa17.5■□□□□ 0.39
CXCR4-203ENST00000466288 CNPY2Q9Y2B0 182 aa17.5■□□□□ 0.39
CXCR4-203ENST00000466288 MYADML2A6NDP7 307 aa17.5■□□□□ 0.39
CXCR4-203ENST00000466288 VWA5AO00534 786 aa17.5■□□□□ 0.39
CXCR4-203ENST00000466288 CSF2RAP15509 400 aa17.5■□□□□ 0.39
CXCR4-203ENST00000466288 PDE6AP16499 860 aa17.5■□□□□ 0.39
CXCR4-203ENST00000466288 IRX5P78411 483 aaPredicted RBP17.5■□□□□ 0.39
CXCR4-203ENST00000466288 CCDC174Q6PII3 467 aa17.5■□□□□ 0.39
CXCR4-203ENST00000466288 MIER1Q8N108 512 aa17.5■□□□□ 0.39
CXCR4-203ENST00000466288 C1orf115Q9H7X2 142 aa17.5■□□□□ 0.39
CXCR4-203ENST00000466288 ELP1O95163 1332 aa17.49■□□□□ 0.39
CXCR4-203ENST00000466288 BDP1A6H8Y1 2624 aa17.49■□□□□ 0.39
CXCR4-203ENST00000466288 SNAI1O95863 264 aaPredicted RBP17.49■□□□□ 0.39
CXCR4-203ENST00000466288 ACRP10323 421 aa17.49■□□□□ 0.39
CXCR4-203ENST00000466288 CCDC85BQ15834 202 aaPredicted RBP17.49■□□□□ 0.39
CXCR4-203ENST00000466288 SLC9C2Q5TAH2 1124 aa17.49■□□□□ 0.39
CXCR4-203ENST00000466288 ZNF365Q70YC5 407 aa17.49■□□□□ 0.39
CXCR4-203ENST00000466288 MSL3Q8N5Y2 521 aaKnown RBP17.49■□□□□ 0.39
CXCR4-203ENST00000466288 GLT1D1Q96MS3 346 aa17.49■□□□□ 0.39
CXCR4-203ENST00000466288 FAM184BQ9ULE4 1060 aa17.49■□□□□ 0.39
CXCR4-203ENST00000466288 PPP1R9AQ9ULJ8 1098 aa17.49■□□□□ 0.39
CXCR4-203ENST00000466288 MROH7Q68CQ1 1323 aa17.48■□□□□ 0.39
CXCR4-203ENST00000466288 TCRBV5S4A2TA0A5A2 114 aa17.48■□□□□ 0.39
CXCR4-203ENST00000466288 DUSP11O75319 330 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms