RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 SCRN1Q12765 414 aa13.01□□□□□ -0.33
VCP-204ENST00000466100 SLC35G1Q2M3R5 365 aa13.01□□□□□ -0.33
VCP-204ENST00000466100 SPICE1Q8N0Z3 855 aa13.01□□□□□ -0.33
VCP-204ENST00000466100 FANCBQ8NB91 859 aa13.01□□□□□ -0.33
VCP-204ENST00000466100 TMX3Q96JJ7 454 aa13.01□□□□□ -0.33
VCP-204ENST00000466100 ZSCAN31Q96LW9 406 aaPredicted RBP13.01□□□□□ -0.33
VCP-204ENST00000466100 NUP88Q99567 741 aaPredicted RBP13.01□□□□□ -0.33
VCP-204ENST00000466100 NCOA5Q9HCD5 579 aaKnown RBP13.01□□□□□ -0.33
VCP-204ENST00000466100 SH2B1Q9NRF2 756 aaPredicted RBP13.01□□□□□ -0.33
VCP-204ENST00000466100 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.01□□□□□ -0.33
VCP-204ENST00000466100 ABT1Q9ULW3 272 aaKnown RBP13.01□□□□□ -0.33
VCP-204ENST00000466100 K7ELQ4 463 aaPredicted RBP13□□□□□ -0.33
VCP-204ENST00000466100 FUT2Q10981 343 aa13□□□□□ -0.33
VCP-204ENST00000466100 STK3Q13188 491 aa13□□□□□ -0.33
VCP-204ENST00000466100 SNAPC2Q13487 334 aa13□□□□□ -0.33
VCP-204ENST00000466100 CUL4AQ13619 759 aa13□□□□□ -0.33
VCP-204ENST00000466100 NTRK3Q16288 839 aa13□□□□□ -0.33
VCP-204ENST00000466100 RTN1Q16799 776 aa13□□□□□ -0.33
VCP-204ENST00000466100 ASPRV1Q53RT3 343 aa13□□□□□ -0.33
VCP-204ENST00000466100 TMTC3Q6ZXV5 915 aa13□□□□□ -0.33
VCP-204ENST00000466100 CCDC144CPQ8IYA2 1237 aa13□□□□□ -0.33
VCP-204ENST00000466100 STAG2Q8N3U4 1231 aa13□□□□□ -0.33
VCP-204ENST00000466100 PROCA1Q8NCQ7 364 aaPredicted RBP13□□□□□ -0.33
VCP-204ENST00000466100 NUP133Q8WUM0 1156 aa13□□□□□ -0.33
VCP-204ENST00000466100 FRMPD2Q68DX3 1309 aaPredicted RBP12.99□□□□□ -0.33
VCP-204ENST00000466100 CNTNAP5Q8WYK1 1306 aa12.99□□□□□ -0.33
VCP-204ENST00000466100 TESPA1A2RU30 521 aaPredicted RBP12.99□□□□□ -0.33
VCP-204ENST00000466100 PLA2G6O60733 806 aa12.99□□□□□ -0.33
VCP-204ENST00000466100 PLEKHA8P1O95397 391 aa12.99□□□□□ -0.33
VCP-204ENST00000466100 CTDNEP1O95476 244 aa12.99□□□□□ -0.33
VCP-204ENST00000466100 PARP1P09874 1014 aaKnown RBP12.99□□□□□ -0.33
VCP-204ENST00000466100 GOLGA8HP0CJ92 632 aa12.99□□□□□ -0.33
VCP-204ENST00000466100 BMP3P12645 472 aa12.99□□□□□ -0.33
VCP-204ENST00000466100 ADD1P35611 737 aaKnown RBP12.99□□□□□ -0.33
VCP-204ENST00000466100 SLC1A4P43007 532 aa12.99□□□□□ -0.33
VCP-204ENST00000466100 GTF2A2P52657 109 aa12.99□□□□□ -0.33
VCP-204ENST00000466100 CCT2P78371 535 aaKnown RBP12.99□□□□□ -0.33
VCP-204ENST00000466100 PPP2R5BQ15173 497 aa12.99□□□□□ -0.33
VCP-204ENST00000466100 FAM83BQ5T0W9 1011 aa12.99□□□□□ -0.33
VCP-204ENST00000466100 TREML2Q5T2D2 321 aa12.99□□□□□ -0.33
VCP-204ENST00000466100 GPATCH4Q5T3I0 446 aaKnown RBP12.99□□□□□ -0.33
VCP-204ENST00000466100 GPAT2Q6NUI2 795 aa12.99□□□□□ -0.33
VCP-204ENST00000466100 BTNL9Q6UXG8 535 aa12.99□□□□□ -0.33
VCP-204ENST00000466100 SYNE3Q6ZMZ3 975 aa12.99□□□□□ -0.33
VCP-204ENST00000466100 KCTD1Q719H9 257 aa12.99□□□□□ -0.33
VCP-204ENST00000466100 NBPF11Q86T75 865 aa12.99□□□□□ -0.33
VCP-204ENST00000466100 NECAB1Q8N987 351 aa12.99□□□□□ -0.33
VCP-204ENST00000466100 CTCFLQ8NI51 663 aaPredicted RBP12.99□□□□□ -0.33
VCP-204ENST00000466100 BRI3BPQ8WY22 251 aa12.99□□□□□ -0.33
VCP-204ENST00000466100 CCDC102AQ96A19 550 aa12.99□□□□□ -0.33
VCP-204ENST00000466100 CHMP4CQ96CF2 233 aa12.99□□□□□ -0.33
VCP-204ENST00000466100 SLKQ9H2G2 1235 aaPredicted RBP12.99□□□□□ -0.33
VCP-204ENST00000466100 RBM28Q9NW13 759 aaKnown RBP12.99□□□□□ -0.33
VCP-204ENST00000466100 NAP1L2Q9ULW6 460 aaPredicted RBP12.99□□□□□ -0.33
VCP-204ENST00000466100 MTMR7Q9Y216 660 aa12.99□□□□□ -0.33
VCP-204ENST00000466100 KIF5BP33176 963 aa12.98□□□□□ -0.33
VCP-204ENST00000466100 MKRN3Q13064 507 aaKnown RBP12.98□□□□□ -0.33
VCP-204ENST00000466100 CCDC96Q2M329 555 aa12.98□□□□□ -0.33
VCP-204ENST00000466100 TTBK2Q6IQ55 1244 aa12.98□□□□□ -0.33
VCP-204ENST00000466100 HSCBQ8IWL3 235 aa12.98□□□□□ -0.33
VCP-204ENST00000466100 SRBD1Q8N5C6 995 aaKnown RBP12.98□□□□□ -0.33
VCP-204ENST00000466100 CPVLQ9H3G5 476 aa12.98□□□□□ -0.33
VCP-204ENST00000466100 RPAP3Q9H6T3 665 aaPredicted RBP12.98□□□□□ -0.33
VCP-204ENST00000466100 TMOD4Q9NZQ9 345 aa12.98□□□□□ -0.33
VCP-204ENST00000466100 AGTPBP1Q9UPW5 1226 aa12.98□□□□□ -0.33
VCP-204ENST00000466100 RBBP6Q7Z6E9 1792 aaKnown RBP12.97□□□□□ -0.33
VCP-204ENST00000466100 CCL15-CCL14A0A0B4J2E2 113 aa12.97□□□□□ -0.33
VCP-204ENST00000466100 KLRF2D3W0D1 207 aa12.97□□□□□ -0.33
VCP-204ENST00000466100 CYTH3O43739 400 aa12.97□□□□□ -0.33
VCP-204ENST00000466100 RAD21O60216 631 aa12.97□□□□□ -0.33
VCP-204ENST00000466100 CETPP11597 493 aa12.97□□□□□ -0.33
VCP-204ENST00000466100 IFNAR1P17181 557 aa12.97□□□□□ -0.33
VCP-204ENST00000466100 SMARCA1P28370 1054 aa12.97□□□□□ -0.33
VCP-204ENST00000466100 HOXA7P31268 230 aaPredicted RBP12.97□□□□□ -0.33
VCP-204ENST00000466100 CCL15Q16663 113 aa12.97□□□□□ -0.33
VCP-204ENST00000466100 CYP4F22Q6NT55 531 aa12.97□□□□□ -0.33
VCP-204ENST00000466100 GADL1Q6ZQY3 521 aa12.97□□□□□ -0.33
VCP-204ENST00000466100 CATSPERGQ6ZRH7 1159 aa12.97□□□□□ -0.33
VCP-204ENST00000466100 FASTKD5Q7L8L6 764 aaKnown RBP12.97□□□□□ -0.33
VCP-204ENST00000466100 CCDC83Q8IWF9 413 aa12.97□□□□□ -0.33
VCP-204ENST00000466100 NSUN7Q8NE18 718 aaKnown RBP12.97□□□□□ -0.33
VCP-204ENST00000466100 MTMR8Q96EF0 704 aa12.97□□□□□ -0.33
VCP-204ENST00000466100 PTPN18Q99952 460 aa12.97□□□□□ -0.33
VCP-204ENST00000466100 SPZ1Q9BXG8 430 aa12.97□□□□□ -0.33
VCP-204ENST00000466100 RIOX1Q9H6W3 641 aa12.97□□□□□ -0.33
VCP-204ENST00000466100 GPCPD1Q9NPB8 672 aa12.97□□□□□ -0.33
VCP-204ENST00000466100 FBXO28Q9NVF7 368 aa12.97□□□□□ -0.33
VCP-204ENST00000466100 CCDC196A0A1B0GTZ2 297 aa12.96□□□□□ -0.33
VCP-204ENST00000466100 MANSC4A6NHS7 340 aaPredicted RBP12.96□□□□□ -0.33
VCP-204ENST00000466100 USP17L15C9J2P7 530 aa12.96□□□□□ -0.33
VCP-204ENST00000466100 BTBD19C9JJ37 291 aa12.96□□□□□ -0.33
VCP-204ENST00000466100 USP17L13C9JLJ4 530 aa12.96□□□□□ -0.33
VCP-204ENST00000466100 TMEM232C9JQI7 657 aa12.96□□□□□ -0.33
VCP-204ENST00000466100 USP17L11C9JVI0 530 aa12.96□□□□□ -0.33
VCP-204ENST00000466100 USP17L18D6R9N7 530 aa12.96□□□□□ -0.33
VCP-204ENST00000466100 USP17L22D6RA61 530 aa12.96□□□□□ -0.33
VCP-204ENST00000466100 USP17L17D6RBQ6 530 aa12.96□□□□□ -0.33
VCP-204ENST00000466100 USP17L19D6RCP7 530 aa12.96□□□□□ -0.33
VCP-204ENST00000466100 USP17L20D6RJB6 530 aa12.96□□□□□ -0.33
VCP-204ENST00000466100 GNAQP50148 359 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms