RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 RHPN1Q8TCX5 695 aa10.32□□□□□ -0.76
DDR1-242ENST00000465966 MAML3Q96JK9 1138 aa10.32□□□□□ -0.76
DDR1-242ENST00000465966 SH2D4AQ9H788 454 aa10.32□□□□□ -0.76
DDR1-242ENST00000465966 IL1RAPL2Q9NP60 686 aa10.32□□□□□ -0.76
DDR1-242ENST00000465966 MAGEB6P1A0A0J9YX57 407 aa10.31□□□□□ -0.76
DDR1-242ENST00000465966 DCDC2CA8MYV0 355 aa10.31□□□□□ -0.76
DDR1-242ENST00000465966 KIAA0355O15063 1070 aa10.31□□□□□ -0.76
DDR1-242ENST00000465966 COL9A1P20849 921 aa10.31□□□□□ -0.76
DDR1-242ENST00000465966 DNAJB2P25686 324 aa10.31□□□□□ -0.76
DDR1-242ENST00000465966 DSG3P32926 999 aa10.31□□□□□ -0.76
DDR1-242ENST00000465966 GUCY1A2P33402 732 aa10.31□□□□□ -0.76
DDR1-242ENST00000465966 GRIN2CQ14957 1233 aa10.31□□□□□ -0.76
DDR1-242ENST00000465966 HSP90AB4PQ58FF6 505 aa10.31□□□□□ -0.76
DDR1-242ENST00000465966 TMEM179Q6ZVK1 233 aa10.31□□□□□ -0.76
DDR1-242ENST00000465966 NUP133Q8WUM0 1156 aa10.31□□□□□ -0.76
DDR1-242ENST00000465966 TIFAQ96CG3 184 aa10.31□□□□□ -0.76
DDR1-242ENST00000465966 KIF1BPQ96EK5 621 aa10.31□□□□□ -0.76
DDR1-242ENST00000465966 TOX2Q96NM4 488 aa10.31□□□□□ -0.76
DDR1-242ENST00000465966 GAS2L1Q99501 681 aaPredicted RBP10.31□□□□□ -0.76
DDR1-242ENST00000465966 BACH2Q9BYV9 841 aa10.31□□□□□ -0.76
DDR1-242ENST00000465966 BCL11AQ9H165 835 aa10.31□□□□□ -0.76
DDR1-242ENST00000465966 ZNF576Q9H609 170 aa10.31□□□□□ -0.76
DDR1-242ENST00000465966 ARHGEF10LQ9HCE6 1279 aa10.31□□□□□ -0.76
DDR1-242ENST00000465966 MCM9Q9NXL9 1143 aa10.31□□□□□ -0.76
DDR1-242ENST00000465966 ZBTB47Q9UFB7 747 aaPredicted RBP10.31□□□□□ -0.76
DDR1-242ENST00000465966 UNC80Q8N2C7 3258 aa10.31□□□□□ -0.76
DDR1-242ENST00000465966 ATAD5Q96QE3 1844 aa10.3□□□□□ -0.76
DDR1-242ENST00000465966 A0A1W2PQ45 241 aaPredicted RBP10.3□□□□□ -0.76
DDR1-242ENST00000465966 A0A1W2PQY0 241 aa10.3□□□□□ -0.76
DDR1-242ENST00000465966 A0A1W2PRG0 241 aa10.3□□□□□ -0.76
DDR1-242ENST00000465966 PGK1P00558 417 aa10.3□□□□□ -0.76
DDR1-242ENST00000465966 AKR1A1P14550 325 aa10.3□□□□□ -0.76
DDR1-242ENST00000465966 GSPT1P15170 499 aaKnown RBP10.3□□□□□ -0.76
DDR1-242ENST00000465966 ITGB8P26012 769 aa10.3□□□□□ -0.76
DDR1-242ENST00000465966 KCTD2Q14681 263 aa10.3□□□□□ -0.76
DDR1-242ENST00000465966 TTC22Q5TAA0 569 aa10.3□□□□□ -0.76
DDR1-242ENST00000465966 SAMD1Q6SPF0 538 aaPredicted RBP10.3□□□□□ -0.76
DDR1-242ENST00000465966 IL27Q8NEV9 243 aa10.3□□□□□ -0.76
DDR1-242ENST00000465966 ATXN2LQ8WWM7 1075 aaKnown RBP10.3□□□□□ -0.76
DDR1-242ENST00000465966 MMP19Q99542 508 aa10.3□□□□□ -0.76
DDR1-242ENST00000465966 TSEN34Q9BSV6 310 aaKnown RBP10.3□□□□□ -0.76
DDR1-242ENST00000465966 CRNKL1Q9BZJ0 848 aaKnown RBP10.3□□□□□ -0.76
DDR1-242ENST00000465966 CCDC8Q9H0W5 538 aaPredicted RBP10.3□□□□□ -0.76
DDR1-242ENST00000465966 STARD7Q9NQZ5 370 aa10.3□□□□□ -0.76
DDR1-242ENST00000465966 DBNLQ9UJU6 430 aaKnown RBP10.3□□□□□ -0.76
DDR1-242ENST00000465966 CNPY2Q9Y2B0 182 aa10.3□□□□□ -0.76
DDR1-242ENST00000465966 DIS3Q9Y2L1 958 aaKnown RBP10.3□□□□□ -0.76
DDR1-242ENST00000465966 MAST2Q6P0Q8 1798 aa10.29□□□□□ -0.76
DDR1-242ENST00000465966 COPB2P35606 906 aa10.29□□□□□ -0.76
DDR1-242ENST00000465966 EPHB4P54760 987 aa10.29□□□□□ -0.76
DDR1-242ENST00000465966 GABPAQ06546 454 aa10.29□□□□□ -0.76
DDR1-242ENST00000465966 TTF1Q15361 905 aaPredicted RBP10.29□□□□□ -0.76
DDR1-242ENST00000465966 BMP2KLQ5H9B9 411 aa10.29□□□□□ -0.76
DDR1-242ENST00000465966 TSHZ3Q63HK5 1081 aa10.29□□□□□ -0.76
DDR1-242ENST00000465966 CCDC129Q6ZRS4 1044 aa10.29□□□□□ -0.76
DDR1-242ENST00000465966 ANKRD33Q7Z3H0 272 aa10.29□□□□□ -0.76
DDR1-242ENST00000465966 ERC1Q8IUD2 1116 aa10.29□□□□□ -0.76
DDR1-242ENST00000465966 SPICE1Q8N0Z3 855 aa10.29□□□□□ -0.76
DDR1-242ENST00000465966 SLC44A5Q8NCS7 719 aa10.29□□□□□ -0.76
DDR1-242ENST00000465966 ATG4CQ96DT6 458 aa10.29□□□□□ -0.76
DDR1-242ENST00000465966 TINF2Q9BSI4 451 aa10.29□□□□□ -0.76
DDR1-242ENST00000465966 SWAP70Q9UH65 585 aa10.29□□□□□ -0.76
DDR1-242ENST00000465966 MOXD2PA6NHM9 499 aa10.28□□□□□ -0.76
DDR1-242ENST00000465966 WDR46O15213 610 aaKnown RBP10.28□□□□□ -0.76
DDR1-242ENST00000465966 TIMP1P01033 207 aa10.28□□□□□ -0.76
DDR1-242ENST00000465966 MX1P20591 662 aa10.28□□□□□ -0.76
DDR1-242ENST00000465966 PDE1AP54750 535 aa10.28□□□□□ -0.76
DDR1-242ENST00000465966 ICA1Q05084 483 aa10.28□□□□□ -0.76
DDR1-242ENST00000465966 FAAP100Q0VG06 881 aa10.28□□□□□ -0.76
DDR1-242ENST00000465966 PPIGQ13427 754 aaKnown RBP eCLIP10.28□□□□□ -0.76
DDR1-242ENST00000465966 SLC9C2Q5TAH2 1124 aa10.28□□□□□ -0.76
DDR1-242ENST00000465966 PPM1EQ8WY54 764 aa10.28□□□□□ -0.76
DDR1-242ENST00000465966 EAF2Q96CJ1 260 aaPredicted RBP10.28□□□□□ -0.76
DDR1-242ENST00000465966 RIOK1Q9BRS2 568 aaKnown RBP10.28□□□□□ -0.76
DDR1-242ENST00000465966 OSBPL3Q9H4L5 887 aa10.28□□□□□ -0.76
DDR1-242ENST00000465966 ANTXR1Q9H6X2 564 aa10.28□□□□□ -0.76
DDR1-242ENST00000465966 VCPKMTQ9H867 229 aa10.28□□□□□ -0.76
DDR1-242ENST00000465966 TLR7Q9NYK1 1049 aaKnown RBP10.28□□□□□ -0.76
DDR1-242ENST00000465966 TMX2Q9Y320 296 aa10.28□□□□□ -0.76
DDR1-242ENST00000465966 MROH7Q68CQ1 1323 aa10.28□□□□□ -0.76
DDR1-242ENST00000465966 SIPA1L1O43166 1804 aa10.28□□□□□ -0.76
DDR1-242ENST00000465966 PGK2P07205 417 aa10.27□□□□□ -0.77
DDR1-242ENST00000465966 STAT3P40763 770 aa10.27□□□□□ -0.77
DDR1-242ENST00000465966 ACLYP53396 1101 aa10.27□□□□□ -0.77
DDR1-242ENST00000465966 MRPS5P82675 430 aaKnown RBP10.27□□□□□ -0.77
DDR1-242ENST00000465966 TMEM132BQ14DG7 1078 aa10.27□□□□□ -0.77
DDR1-242ENST00000465966 AKNAD1Q5T1N1 836 aa10.27□□□□□ -0.77
DDR1-242ENST00000465966 MFSD5Q6N075 450 aa10.27□□□□□ -0.77
DDR1-242ENST00000465966 RIOX2Q8IUF8 465 aa10.27□□□□□ -0.77
DDR1-242ENST00000465966 AMOTL1Q8IY63 956 aa10.27□□□□□ -0.77
DDR1-242ENST00000465966 TMEM199Q8N511 208 aa10.27□□□□□ -0.77
DDR1-242ENST00000465966 MSL3Q8N5Y2 521 aaKnown RBP10.27□□□□□ -0.77
DDR1-242ENST00000465966 USP38Q8NB14 1042 aa10.27□□□□□ -0.77
DDR1-242ENST00000465966 VTI1AQ96AJ9 217 aa10.27□□□□□ -0.77
DDR1-242ENST00000465966 CCDC17Q96LX7 622 aa10.27□□□□□ -0.77
DDR1-242ENST00000465966 GLT1D1Q96MS3 346 aa10.27□□□□□ -0.77
DDR1-242ENST00000465966 ASB2Q96Q27 587 aa10.27□□□□□ -0.77
DDR1-242ENST00000465966 TSPYL2Q9H2G4 693 aaPredicted RBP10.27□□□□□ -0.77
DDR1-242ENST00000465966 SPC25Q9HBM1 224 aa10.27□□□□□ -0.77
DDR1-242ENST00000465966 THEGQ9P2T0 379 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms