RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 PRUNE2Q8WUY3 3088 aa12.48□□□□□ -0.41
GPNMB-206ENST00000465673 PQBP1O60828 265 aaKnown RBP12.47□□□□□ -0.41
GPNMB-206ENST00000465673 MBD4O95243 580 aa12.47□□□□□ -0.41
GPNMB-206ENST00000465673 IRX5P78411 483 aaPredicted RBP12.47□□□□□ -0.41
GPNMB-206ENST00000465673 TTF1Q15361 905 aaPredicted RBP12.47□□□□□ -0.41
GPNMB-206ENST00000465673 MB21D1Q8N884 522 aa12.47□□□□□ -0.41
GPNMB-206ENST00000465673 MMP19Q99542 508 aa12.47□□□□□ -0.41
GPNMB-206ENST00000465673 SLC5A4Q9NY91 659 aa12.47□□□□□ -0.41
GPNMB-206ENST00000465673 PHF24Q9UPV7 400 aa12.47□□□□□ -0.41
GPNMB-206ENST00000465673 USP17L12C9JPN9 530 aa12.46□□□□□ -0.41
GPNMB-206ENST00000465673 USP17L21D6R901 530 aa12.46□□□□□ -0.41
GPNMB-206ENST00000465673 RAD21O60216 631 aa12.46□□□□□ -0.41
GPNMB-206ENST00000465673 ZNF865P0CJ78 1059 aaPredicted RBP12.46□□□□□ -0.41
GPNMB-206ENST00000465673 RARBP10826 455 aa12.46□□□□□ -0.41
GPNMB-206ENST00000465673 EEF2P13639 858 aaKnown RBP12.46□□□□□ -0.41
GPNMB-206ENST00000465673 CDK8P49336 464 aa12.46□□□□□ -0.41
GPNMB-206ENST00000465673 SMAD3P84022 425 aaKnown RBP12.46□□□□□ -0.41
GPNMB-206ENST00000465673 ZNF792Q3KQV3 632 aa12.46□□□□□ -0.41
GPNMB-206ENST00000465673 ERC1Q8IUD2 1116 aa12.46□□□□□ -0.41
GPNMB-206ENST00000465673 ABRAQ8N0Z2 381 aa12.46□□□□□ -0.41
GPNMB-206ENST00000465673 RNPC3Q96LT9 517 aaKnown RBP12.46□□□□□ -0.41
GPNMB-206ENST00000465673 TINF2Q9BSI4 451 aa12.46□□□□□ -0.41
GPNMB-206ENST00000465673 BOLA2Q9H3K6 86 aa12.46□□□□□ -0.41
GPNMB-206ENST00000465673 ARHGEF10LQ9HCE6 1279 aa12.46□□□□□ -0.41
GPNMB-206ENST00000465673 TACC3Q9Y6A5 838 aa12.46□□□□□ -0.41
GPNMB-206ENST00000465673 SPTBN5Q9NRC6 3674 aaKnown RBP12.46□□□□□ -0.42
GPNMB-206ENST00000465673 ZNFX1Q9P2E3 1918 aaKnown RBP12.45□□□□□ -0.42
GPNMB-206ENST00000465673 A0A1W2PQ45 241 aaPredicted RBP12.45□□□□□ -0.42
GPNMB-206ENST00000465673 A0A1W2PQY0 241 aa12.45□□□□□ -0.42
GPNMB-206ENST00000465673 WDR46O15213 610 aaKnown RBP12.45□□□□□ -0.42
GPNMB-206ENST00000465673 CLTBP09497 229 aa12.45□□□□□ -0.42
GPNMB-206ENST00000465673 FOSL2P15408 326 aa12.45□□□□□ -0.42
GPNMB-206ENST00000465673 GRIN2CQ14957 1233 aa12.45□□□□□ -0.42
GPNMB-206ENST00000465673 FAM83BQ5T0W9 1011 aa12.45□□□□□ -0.42
GPNMB-206ENST00000465673 C12orf60Q5U649 245 aa12.45□□□□□ -0.42
GPNMB-206ENST00000465673 C1orf53Q5VUE5 145 aa12.45□□□□□ -0.42
GPNMB-206ENST00000465673 TMED8Q6PL24 325 aaPredicted RBP12.45□□□□□ -0.42
GPNMB-206ENST00000465673 STK11IPQ8N1F8 1099 aa12.45□□□□□ -0.42
GPNMB-206ENST00000465673 USP38Q8NB14 1042 aa12.45□□□□□ -0.42
GPNMB-206ENST00000465673 NUP88Q99567 741 aaPredicted RBP12.45□□□□□ -0.42
GPNMB-206ENST00000465673 SWAP70Q9UH65 585 aa12.45□□□□□ -0.42
GPNMB-206ENST00000465673 ADAMTS5Q9UNA0 930 aa12.45□□□□□ -0.42
GPNMB-206ENST00000465673 BAZ2AQ9UIF9 1905 aaKnown RBP12.45□□□□□ -0.42
GPNMB-206ENST00000465673 COL11A1P12107 1806 aaPredicted RBP12.44□□□□□ -0.42
GPNMB-206ENST00000465673 TTC28Q96AY4 2481 aa12.44□□□□□ -0.42
GPNMB-206ENST00000465673 MYADML2A6NDP7 307 aa12.44□□□□□ -0.42
GPNMB-206ENST00000465673 VWA5AO00534 786 aa12.44□□□□□ -0.42
GPNMB-206ENST00000465673 KIAA0355O15063 1070 aa12.44□□□□□ -0.42
GPNMB-206ENST00000465673 SLC25A27O95847 323 aa12.44□□□□□ -0.42
GPNMB-206ENST00000465673 IFIT2P09913 472 aaKnown RBP12.44□□□□□ -0.42
GPNMB-206ENST00000465673 RAG1P15918 1043 aa12.44□□□□□ -0.42
GPNMB-206ENST00000465673 ADD2P35612 726 aa12.44□□□□□ -0.42
GPNMB-206ENST00000465673 STAT3P40763 770 aa12.44□□□□□ -0.42
GPNMB-206ENST00000465673 FAAP100Q0VG06 881 aa12.44□□□□□ -0.42
GPNMB-206ENST00000465673 RIOX2Q8IUF8 465 aa12.44□□□□□ -0.42
GPNMB-206ENST00000465673 SIRT2Q8IXJ6 389 aa12.44□□□□□ -0.42
GPNMB-206ENST00000465673 REPS2Q8NFH8 660 aa12.44□□□□□ -0.42
GPNMB-206ENST00000465673 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.44□□□□□ -0.42
GPNMB-206ENST00000465673 TMEM39AQ9NV64 488 aa12.44□□□□□ -0.42
GPNMB-206ENST00000465673 ZNF214Q9UL59 606 aaPredicted RBP12.44□□□□□ -0.42
GPNMB-206ENST00000465673 RIPK3Q9Y572 518 aa12.44□□□□□ -0.42
GPNMB-206ENST00000465673 PARP14Q460N5 1801 aa12.44□□□□□ -0.42
GPNMB-206ENST00000465673 ADAMTS4O75173 837 aa12.43□□□□□ -0.42
GPNMB-206ENST00000465673 SLC4A3P48751 1232 aa12.43□□□□□ -0.42
GPNMB-206ENST00000465673 KCTD2Q14681 263 aa12.43□□□□□ -0.42
GPNMB-206ENST00000465673 C16orf86Q6ZW13 317 aa12.43□□□□□ -0.42
GPNMB-206ENST00000465673 RNF180Q86T96 592 aa12.43□□□□□ -0.42
GPNMB-206ENST00000465673 CLASRPQ8N2M8 674 aaKnown RBP12.43□□□□□ -0.42
GPNMB-206ENST00000465673 CCDC17Q96LX7 622 aa12.43□□□□□ -0.42
GPNMB-206ENST00000465673 SH2D4AQ9H788 454 aa12.43□□□□□ -0.42
GPNMB-206ENST00000465673 PRDM6Q9NQX0 595 aa12.43□□□□□ -0.42
GPNMB-206ENST00000465673 PAG1Q9NWQ8 432 aa12.43□□□□□ -0.42
GPNMB-206ENST00000465673 PPP1R9AQ9ULJ8 1098 aa12.43□□□□□ -0.42
GPNMB-206ENST00000465673 SYNRGQ9UMZ2 1314 aa12.42□□□□□ -0.42
GPNMB-206ENST00000465673 GRXCR1A8MXD5 290 aa12.42□□□□□ -0.42
GPNMB-206ENST00000465673 ADCY6O43306 1168 aa12.42□□□□□ -0.42
GPNMB-206ENST00000465673 SNAI1O95863 264 aaPredicted RBP12.42□□□□□ -0.42
GPNMB-206ENST00000465673 AKR1A1P14550 325 aa12.42□□□□□ -0.42
GPNMB-206ENST00000465673 ACLYP53396 1101 aa12.42□□□□□ -0.42
GPNMB-206ENST00000465673 HNRNPUQ00839 825 aaKnown RBP eCLIP12.42□□□□□ -0.42
GPNMB-206ENST00000465673 FPGSQ05932 587 aa12.42□□□□□ -0.42
GPNMB-206ENST00000465673 CTR9Q6PD62 1173 aa12.42□□□□□ -0.42
GPNMB-206ENST00000465673 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.42□□□□□ -0.42
GPNMB-206ENST00000465673 KIF1BPQ96EK5 621 aa12.42□□□□□ -0.42
GPNMB-206ENST00000465673 PUS7LQ9H0K6 701 aaKnown RBP12.42□□□□□ -0.42
GPNMB-206ENST00000465673 ATP8A2Q9NTI2 1148 aa12.42□□□□□ -0.42
GPNMB-206ENST00000465673 NRBP1Q9UHY1 535 aa12.42□□□□□ -0.42
GPNMB-206ENST00000465673 SLC4A4Q9Y6R1 1079 aa12.42□□□□□ -0.42
GPNMB-206ENST00000465673 DNAJB2P25686 324 aa12.41□□□□□ -0.42
GPNMB-206ENST00000465673 PBX2P40425 430 aa12.41□□□□□ -0.42
GPNMB-206ENST00000465673 KCNA10Q16322 511 aa12.41□□□□□ -0.42
GPNMB-206ENST00000465673 HSP90AB4PQ58FF6 505 aa12.41□□□□□ -0.42
GPNMB-206ENST00000465673 C16orf59Q7L2K0 433 aa12.41□□□□□ -0.42
GPNMB-206ENST00000465673 KLHDC9Q8NEP7 349 aa12.41□□□□□ -0.42
GPNMB-206ENST00000465673 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.41□□□□□ -0.42
GPNMB-206ENST00000465673 KANSL2Q9H9L4 492 aa12.41□□□□□ -0.42
GPNMB-206ENST00000465673 STARD7Q9NQZ5 370 aa12.41□□□□□ -0.42
GPNMB-206ENST00000465673 ZHX1Q9UKY1 873 aaPredicted RBP12.41□□□□□ -0.42
GPNMB-206ENST00000465673 DIS3Q9Y2L1 958 aaKnown RBP12.41□□□□□ -0.42
GPNMB-206ENST00000465673 MYH8P13535 1937 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms