RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 IGHA2P01877 340 aa16.34■□□□□ 0.21
HDAC6-215ENST00000465457 ASNSP08243 561 aa16.34■□□□□ 0.21
HDAC6-215ENST00000465457 ARID4AP29374 1257 aaPredicted RBP16.34■□□□□ 0.21
HDAC6-215ENST00000465457 NEK4P51957 841 aa16.34■□□□□ 0.21
HDAC6-215ENST00000465457 SNX17Q15036 470 aa16.34■□□□□ 0.21
HDAC6-215ENST00000465457 MFSD14CQ5VZR4 134 aa16.34■□□□□ 0.21
HDAC6-215ENST00000465457 SPTY2D1Q68D10 685 aaPredicted RBP16.34■□□□□ 0.21
HDAC6-215ENST00000465457 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.34■□□□□ 0.217e-7■■■□□ 15.7
HDAC6-215ENST00000465457 SLKQ9H2G2 1235 aaPredicted RBP16.34■□□□□ 0.21
HDAC6-215ENST00000465457 TMEM265A0A087WTH1 108 aa16.33■□□□□ 0.2
HDAC6-215ENST00000465457 RNF113AO15541 343 aaKnown RBP16.33■□□□□ 0.2
HDAC6-215ENST00000465457 MYCNP04198 464 aaPredicted RBP16.33■□□□□ 0.2
HDAC6-215ENST00000465457 PSMA5P28066 241 aa16.33■□□□□ 0.2
HDAC6-215ENST00000465457 PLA2G5P39877 138 aa16.33■□□□□ 0.2
HDAC6-215ENST00000465457 KRT32Q14532 448 aa16.33■□□□□ 0.2
HDAC6-215ENST00000465457 MAPKAPK5Q8IW41 473 aa16.33■□□□□ 0.2
HDAC6-215ENST00000465457 FERMT2Q96AC1 680 aa16.33■□□□□ 0.2
HDAC6-215ENST00000465457 CWC22Q9HCG8 908 aaKnown RBP16.33■□□□□ 0.2
HDAC6-215ENST00000465457 BTBD7Q9P203 1132 aa16.33■□□□□ 0.2
HDAC6-215ENST00000465457 PALD1Q9ULE6 856 aa16.33■□□□□ 0.2
HDAC6-215ENST00000465457 SNX14Q9Y5W7 946 aa16.33■□□□□ 0.2
HDAC6-215ENST00000465457 U3KPZ7 1027 aaPredicted RBP16.33■□□□□ 0.2
HDAC6-215ENST00000465457 C19orf81C9J6K1 198 aa16.32■□□□□ 0.2
HDAC6-215ENST00000465457 CD2BP2O95400 341 aaKnown RBP16.32■□□□□ 0.2
HDAC6-215ENST00000465457 FLT1P17948 1338 aa16.32■□□□□ 0.2
HDAC6-215ENST00000465457 PTPREP23469 700 aa16.32■□□□□ 0.2
HDAC6-215ENST00000465457 DDIT3P35638 169 aa16.32■□□□□ 0.2
HDAC6-215ENST00000465457 GRB14Q14449 540 aa16.32■□□□□ 0.2
HDAC6-215ENST00000465457 NECTIN1Q15223 517 aa16.32■□□□□ 0.2
HDAC6-215ENST00000465457 ZMYM1Q5SVZ6 1142 aa16.32■□□□□ 0.2
HDAC6-215ENST00000465457 ADGRA1Q86SQ6 560 aa16.32■□□□□ 0.2
HDAC6-215ENST00000465457 RNPC3Q96LT9 517 aaKnown RBP16.32■□□□□ 0.2
HDAC6-215ENST00000465457 RAI14Q9P0K7 980 aa16.32■□□□□ 0.2
HDAC6-215ENST00000465457 ZNFX1Q9P2E3 1918 aaKnown RBP16.32■□□□□ 0.2
HDAC6-215ENST00000465457 PI4KBQ9UBF8 816 aa16.32■□□□□ 0.2
HDAC6-215ENST00000465457 RBM8AQ9Y5S9 174 aaKnown RBP16.32■□□□□ 0.2
HDAC6-215ENST00000465457 CHD7Q9P2D1 2997 aa16.32■□□□□ 0.2
HDAC6-215ENST00000465457 PARP14Q460N5 1801 aa16.31■□□□□ 0.2
HDAC6-215ENST00000465457 SLC15A5A6NIM6 579 aa16.31■□□□□ 0.2
HDAC6-215ENST00000465457 MSCO60682 206 aa16.31■□□□□ 0.2
HDAC6-215ENST00000465457 HOXC6P09630 235 aa16.31■□□□□ 0.2
HDAC6-215ENST00000465457 ADCYAP1R1P41586 468 aa16.31■□□□□ 0.2
HDAC6-215ENST00000465457 ATP2B2Q01814 1243 aa16.31■□□□□ 0.2
HDAC6-215ENST00000465457 PTH1RQ03431 593 aa16.31■□□□□ 0.2
HDAC6-215ENST00000465457 TSGA10IPQ3SY00 556 aa16.31■□□□□ 0.2
HDAC6-215ENST00000465457 PPM1EQ8WY54 764 aa16.31■□□□□ 0.2
HDAC6-215ENST00000465457 DSCC1Q9BVC3 393 aa16.31■□□□□ 0.2
HDAC6-215ENST00000465457 AATFQ9NY61 560 aaKnown RBP eCLIP16.31■□□□□ 0.2
HDAC6-215ENST00000465457 XIRP2A4UGR9 3374 aa16.3■□□□□ 0.2
HDAC6-215ENST00000465457 DNAJB2P25686 324 aa16.3■□□□□ 0.2
HDAC6-215ENST00000465457 CREB3L3Q68CJ9 461 aa16.3■□□□□ 0.2
HDAC6-215ENST00000465457 SPATA5Q8NB90 893 aa16.3■□□□□ 0.2
HDAC6-215ENST00000465457 TGFBRAP1Q8WUH2 860 aa16.3■□□□□ 0.2
HDAC6-215ENST00000465457 SAP30BPQ9UHR5 308 aaKnown RBP16.3■□□□□ 0.2
HDAC6-215ENST00000465457 RABGAP1Q9Y3P9 1069 aa16.3■□□□□ 0.2
HDAC6-215ENST00000465457 COL11A1P12107 1806 aaPredicted RBP16.29■□□□□ 0.2
HDAC6-215ENST00000465457 KBTBD13C9JR72 458 aa16.29■□□□□ 0.2
HDAC6-215ENST00000465457 GH2P01242 217 aa16.29■□□□□ 0.2
HDAC6-215ENST00000465457 MCAMP43121 646 aa16.29■□□□□ 0.2
HDAC6-215ENST00000465457 TLE2Q04725 743 aa16.29■□□□□ 0.2
HDAC6-215ENST00000465457 FAM47AQ5JRC9 791 aa16.29■□□□□ 0.2
HDAC6-215ENST00000465457 PRAMEF19Q5SWL8 479 aa16.29■□□□□ 0.2
HDAC6-215ENST00000465457 USP17L2Q6R6M4 530 aa16.29■□□□□ 0.2
HDAC6-215ENST00000465457 METTL16Q86W50 562 aaKnown RBP16.29■□□□□ 0.2
HDAC6-215ENST00000465457 GTF3C2Q8WUA4 911 aaPredicted RBP16.29■□□□□ 0.2
HDAC6-215ENST00000465457 INTS4Q96HW7 963 aaKnown RBP16.29■□□□□ 0.2
HDAC6-215ENST00000465457 CYP46A1Q9Y6A2 500 aa16.29■□□□□ 0.2
HDAC6-215ENST00000465457 SPDYE16A6NNV3 312 aaPredicted RBP16.28■□□□□ 0.2
HDAC6-215ENST00000465457 VCAM1P19320 739 aa16.28■□□□□ 0.2
HDAC6-215ENST00000465457 GSTO1P78417 241 aa16.28■□□□□ 0.2
HDAC6-215ENST00000465457 ANKRD1Q15327 319 aa16.28■□□□□ 0.2
HDAC6-215ENST00000465457 VPS53Q5VIR6 699 aa16.28■□□□□ 0.2
HDAC6-215ENST00000465457 CRACR2BQ8N4Y2 399 aaPredicted RBP16.28■□□□□ 0.2
HDAC6-215ENST00000465457 ACER1Q8TDN7 264 aa16.28■□□□□ 0.2
HDAC6-215ENST00000465457 ADAMTS19Q8TE59 1207 aa16.28■□□□□ 0.2
HDAC6-215ENST00000465457 APPBP2Q92624 585 aa16.28■□□□□ 0.2
HDAC6-215ENST00000465457 C12orf42Q96LP6 360 aa16.28■□□□□ 0.2
HDAC6-215ENST00000465457 ZSWIM6Q9HCJ5 1215 aa16.28■□□□□ 0.2
HDAC6-215ENST00000465457 SLC27A2O14975 620 aa16.27■□□□□ 0.2
HDAC6-215ENST00000465457 LDHCP07864 332 aa16.27■□□□□ 0.2
HDAC6-215ENST00000465457 ZAP70P43403 619 aa16.27■□□□□ 0.2
HDAC6-215ENST00000465457 CCNA1P78396 465 aa16.27■□□□□ 0.2
HDAC6-215ENST00000465457 NUCB2P80303 420 aa16.27■□□□□ 0.2
HDAC6-215ENST00000465457 CUL4AQ13619 759 aa16.27■□□□□ 0.2
HDAC6-215ENST00000465457 LRRC41Q15345 812 aa16.27■□□□□ 0.2
HDAC6-215ENST00000465457 NFKBIBQ15653 356 aa16.27■□□□□ 0.2
HDAC6-215ENST00000465457 ZNF589Q86UQ0 364 aaPredicted RBP16.27■□□□□ 0.2
HDAC6-215ENST00000465457 ZSCAN31Q96LW9 406 aaPredicted RBP16.27■□□□□ 0.2
HDAC6-215ENST00000465457 NECAB3Q96P71 396 aaPredicted RBP16.27■□□□□ 0.2
HDAC6-215ENST00000465457 FEZ1Q99689 392 aa16.27■□□□□ 0.2
HDAC6-215ENST00000465457 DHX36Q9H2U1 1008 aaKnown RBP16.27■□□□□ 0.2
HDAC6-215ENST00000465457 ZNF576Q9H609 170 aa16.27■□□□□ 0.2
HDAC6-215ENST00000465457 CTNNA3Q9UI47 895 aa16.27■□□□□ 0.2
HDAC6-215ENST00000465457 IVNS1ABPQ9Y6Y0 642 aa16.27■□□□□ 0.2
HDAC6-215ENST00000465457 USP17L15C9J2P7 530 aa16.26■□□□□ 0.19
HDAC6-215ENST00000465457 USP17L13C9JLJ4 530 aa16.26■□□□□ 0.19
HDAC6-215ENST00000465457 USP17L11C9JVI0 530 aa16.26■□□□□ 0.19
HDAC6-215ENST00000465457 USP17L18D6R9N7 530 aa16.26■□□□□ 0.19
HDAC6-215ENST00000465457 USP17L22D6RA61 530 aa16.26■□□□□ 0.19
HDAC6-215ENST00000465457 USP17L17D6RBQ6 530 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms