RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 TOX2Q96NM4 488 aa18.34■□□□□ 0.53
HDAC6-214ENST00000465269 SERPINB13Q9UIV8 391 aa18.34■□□□□ 0.53
HDAC6-214ENST00000465269 MSRAQ9UJ68 235 aa18.34■□□□□ 0.53
HDAC6-214ENST00000465269 SYNRGQ9UMZ2 1314 aa18.33■□□□□ 0.53
HDAC6-214ENST00000465269 RFXAPO00287 272 aa18.33■□□□□ 0.52
HDAC6-214ENST00000465269 KCNA10Q16322 511 aa18.33■□□□□ 0.52
HDAC6-214ENST00000465269 ATF7IPQ6VMQ6 1270 aa18.33■□□□□ 0.52
HDAC6-214ENST00000465269 CLEC10AQ8IUN9 316 aa18.33■□□□□ 0.52
HDAC6-214ENST00000465269 SLC28A3Q9HAS3 691 aa18.33■□□□□ 0.52
HDAC6-214ENST00000465269 SLC5A4Q9NY91 659 aa18.33■□□□□ 0.52
HDAC6-214ENST00000465269 CYP7A1P22680 504 aa18.32■□□□□ 0.52
HDAC6-214ENST00000465269 CYP2C18P33260 490 aa18.32■□□□□ 0.52
HDAC6-214ENST00000465269 USP5P45974 858 aa18.32■□□□□ 0.52
HDAC6-214ENST00000465269 PLCD1P51178 756 aa18.32■□□□□ 0.52
HDAC6-214ENST00000465269 TMEM31Q5JXX7 168 aa18.32■□□□□ 0.52
HDAC6-214ENST00000465269 SPICE1Q8N0Z3 855 aa18.32■□□□□ 0.52
HDAC6-214ENST00000465269 TINF2Q9BSI4 451 aa18.32■□□□□ 0.52
HDAC6-214ENST00000465269 MROH8Q9H579 483 aa18.32■□□□□ 0.52
HDAC6-214ENST00000465269 SMC4Q9NTJ3 1288 aa18.32■□□□□ 0.52
HDAC6-214ENST00000465269 HOXC10Q9NYD6 342 aa18.32■□□□□ 0.52
HDAC6-214ENST00000465269 UQCRFS1P1P0C7P4 283 aa18.31■□□□□ 0.52
HDAC6-214ENST00000465269 FCER1AP12319 257 aa18.31■□□□□ 0.52
HDAC6-214ENST00000465269 ZAP70P43403 619 aa18.31■□□□□ 0.52
HDAC6-214ENST00000465269 TMEM132BQ14DG7 1078 aa18.31■□□□□ 0.52
HDAC6-214ENST00000465269 RAB30Q15771 203 aa18.31■□□□□ 0.52
HDAC6-214ENST00000465269 KRT40Q6A162 431 aa18.31■□□□□ 0.52
HDAC6-214ENST00000465269 DBNDD2Q9BQY9 259 aa18.31■□□□□ 0.52
HDAC6-214ENST00000465269 CABP5Q9NP86 173 aa18.31■□□□□ 0.52
HDAC6-214ENST00000465269 UMODL1Q5DID0 1318 aa18.3■□□□□ 0.52
HDAC6-214ENST00000465269 ZNF521Q96K83 1311 aa18.3■□□□□ 0.52
HDAC6-214ENST00000465269 MPHOSPH10O00566 681 aaKnown RBP18.3■□□□□ 0.52
HDAC6-214ENST00000465269 DSG3P32926 999 aa18.3■□□□□ 0.52
HDAC6-214ENST00000465269 TTC39AQ5SRH9 613 aa18.3■□□□□ 0.52
HDAC6-214ENST00000465269 CCSAPQ6IQ19 270 aaPredicted RBP18.3■□□□□ 0.52
HDAC6-214ENST00000465269 OTOP2Q7RTS6 562 aa18.3■□□□□ 0.52
HDAC6-214ENST00000465269 ABRAQ8N0Z2 381 aa18.3■□□□□ 0.52
HDAC6-214ENST00000465269 MMP19Q99542 508 aa18.3■□□□□ 0.52
HDAC6-214ENST00000465269 TSPYL2Q9H2G4 693 aaPredicted RBP18.3■□□□□ 0.52
HDAC6-214ENST00000465269 ADCY6O43306 1168 aa18.29■□□□□ 0.52
HDAC6-214ENST00000465269 FLOT1O75955 427 aa18.29■□□□□ 0.52
HDAC6-214ENST00000465269 AKR1A1P14550 325 aa18.29■□□□□ 0.52
HDAC6-214ENST00000465269 CDK7P50613 346 aa18.29■□□□□ 0.52
HDAC6-214ENST00000465269 ZNF792Q3KQV3 632 aa18.29■□□□□ 0.52
HDAC6-214ENST00000465269 PSRC1Q6PGN9 363 aaPredicted RBP18.29■□□□□ 0.52
HDAC6-214ENST00000465269 FAM9BQ8IZU0 186 aa18.29■□□□□ 0.52
HDAC6-214ENST00000465269 TMEM199Q8N511 208 aa18.29■□□□□ 0.52
HDAC6-214ENST00000465269 KLHDC9Q8NEP7 349 aa18.29■□□□□ 0.52
HDAC6-214ENST00000465269 NUP133Q8WUM0 1156 aa18.29■□□□□ 0.52
HDAC6-214ENST00000465269 VTI1AQ96AJ9 217 aa18.29■□□□□ 0.52
HDAC6-214ENST00000465269 TSEN34Q9BSV6 310 aaKnown RBP18.29■□□□□ 0.52
HDAC6-214ENST00000465269 CERS4Q9HA82 394 aa18.29■□□□□ 0.52
HDAC6-214ENST00000465269 NOB1Q9ULX3 412 aaKnown RBP18.29■□□□□ 0.52
HDAC6-214ENST00000465269 ARIH1Q9Y4X5 557 aaPredicted RBP18.29■□□□□ 0.52
HDAC6-214ENST00000465269 PPP2R2DQ66LE6 453 aa18.28■□□□□ 0.52
HDAC6-214ENST00000465269 HERVK_113Q902F9 699 aa18.28■□□□□ 0.52
HDAC6-214ENST00000465269 EHD4Q9H223 541 aa18.28■□□□□ 0.52
HDAC6-214ENST00000465269 IL23AQ9NPF7 189 aa18.28■□□□□ 0.52
HDAC6-214ENST00000465269 FBXO28Q9NVF7 368 aa18.28■□□□□ 0.52
HDAC6-214ENST00000465269 BRWD1Q9NSI6 2320 aa18.28■□□□□ 0.52
HDAC6-214ENST00000465269 COL11A1P12107 1806 aaPredicted RBP18.28■□□□□ 0.52
HDAC6-214ENST00000465269 ZNF316A6NFI3 1004 aaPredicted RBP18.27■□□□□ 0.52
HDAC6-214ENST00000465269 ERC2O15083 957 aa18.27■□□□□ 0.52
HDAC6-214ENST00000465269 CCDC174Q6PII3 467 aa18.27■□□□□ 0.52
HDAC6-214ENST00000465269 CD320Q9NPF0 282 aa18.27■□□□□ 0.52
HDAC6-214ENST00000465269 NRBP1Q9UHY1 535 aa18.27■□□□□ 0.52
HDAC6-214ENST00000465269 ROBO3Q96MS0 1386 aa18.27■□□□□ 0.51
HDAC6-214ENST00000465269 LRRC37A2A6NM11 1700 aa18.26■□□□□ 0.51
HDAC6-214ENST00000465269 PNMA6EA0A0J9YXQ4 647 aa18.26■□□□□ 0.51
HDAC6-214ENST00000465269 EPOPA6NHQ4 379 aa18.26■□□□□ 0.51
HDAC6-214ENST00000465269 TLL1O43897 1013 aa18.26■□□□□ 0.51
HDAC6-214ENST00000465269 IDH1O75874 414 aaKnown RBP18.26■□□□□ 0.51
HDAC6-214ENST00000465269 ASGR1P07306 291 aa18.26■□□□□ 0.51
HDAC6-214ENST00000465269 FAM126BQ8IXS8 530 aa18.26■□□□□ 0.51
HDAC6-214ENST00000465269 MB21D1Q8N884 522 aa18.26■□□□□ 0.51
HDAC6-214ENST00000465269 ZHX1Q9UKY1 873 aaPredicted RBP18.26■□□□□ 0.51
HDAC6-214ENST00000465269 MOXD2PA6NHM9 499 aa18.25■□□□□ 0.51
HDAC6-214ENST00000465269 SNAI1O95863 264 aaPredicted RBP18.25■□□□□ 0.51
HDAC6-214ENST00000465269 FGBP02675 491 aa18.25■□□□□ 0.51
HDAC6-214ENST00000465269 C6orf222P0C671 652 aaPredicted RBP18.25■□□□□ 0.51
HDAC6-214ENST00000465269 CCL23P55773 120 aa18.25■□□□□ 0.51
HDAC6-214ENST00000465269 AAK1Q2M2I8 961 aa18.25■□□□□ 0.51
HDAC6-214ENST00000465269 TTC6Q86TZ1 520 aa18.25■□□□□ 0.51
HDAC6-214ENST00000465269 SIAH1Q8IUQ4 282 aa18.25■□□□□ 0.51
HDAC6-214ENST00000465269 MAGEB6Q8N7X4 407 aa18.25■□□□□ 0.51
HDAC6-214ENST00000465269 GLT1D1Q96MS3 346 aa18.25■□□□□ 0.51
HDAC6-214ENST00000465269 CNPY2Q9Y2B0 182 aa18.25■□□□□ 0.51
HDAC6-214ENST00000465269 MTCH2Q9Y6C9 303 aa18.25■□□□□ 0.51
HDAC6-214ENST00000465269 PARP14Q460N5 1801 aa18.24■□□□□ 0.51
HDAC6-214ENST00000465269 ARVCFO00192 962 aa18.24■□□□□ 0.51
HDAC6-214ENST00000465269 CYP2D6P10635 497 aa18.24■□□□□ 0.51
HDAC6-214ENST00000465269 G3BP1Q13283 466 aaKnown RBP eCLIP18.24■□□□□ 0.518e-6■□□□□ 9
HDAC6-214ENST00000465269 MTX1Q13505 466 aa18.24■□□□□ 0.51
HDAC6-214ENST00000465269 KCTD2Q14681 263 aa18.24■□□□□ 0.51
HDAC6-214ENST00000465269 TLR7Q9NYK1 1049 aaKnown RBP18.24■□□□□ 0.51
HDAC6-214ENST00000465269 ELP1O95163 1332 aa18.23■□□□□ 0.51
HDAC6-214ENST00000465269 GPR37L1O60883 481 aa18.23■□□□□ 0.51
HDAC6-214ENST00000465269 POLR3DP05423 398 aaPredicted RBP18.23■□□□□ 0.51
HDAC6-214ENST00000465269 PTGS1P23219 599 aa18.23■□□□□ 0.51
HDAC6-214ENST00000465269 GABPAQ06546 454 aa18.23■□□□□ 0.51
HDAC6-214ENST00000465269 ALDH1L2Q3SY69 923 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms