RNA–Protein interactions for RNA: ENST00000464852.1

TNRC18-209, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 3

Gene TNRC18, Length 418 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-209ENST00000464852 PRAMEF18Q5VWM3 479 aa12.62□□□□□ -0.39
TNRC18-209ENST00000464852 CCDC83Q8IWF9 413 aa12.62□□□□□ -0.39
TNRC18-209ENST00000464852 FANCBQ8NB91 859 aa12.62□□□□□ -0.39
TNRC18-209ENST00000464852 SPRYD3Q8NCJ5 442 aa12.62□□□□□ -0.39
TNRC18-209ENST00000464852 ZNF333Q96JL9 665 aa12.62□□□□□ -0.39
TNRC18-209ENST00000464852 TMEM47Q9BQJ4 181 aa12.62□□□□□ -0.39
TNRC18-209ENST00000464852 LLPHQ9BRT6 129 aaKnown RBP12.62□□□□□ -0.39
TNRC18-209ENST00000464852 CLIP2Q9UDT6 1046 aa12.62□□□□□ -0.39
TNRC18-209ENST00000464852 ZNF112Q9UJU3 913 aa12.62□□□□□ -0.39
TNRC18-209ENST00000464852 PPP1R12BO60237 982 aaPredicted RBP12.61□□□□□ -0.39
TNRC18-209ENST00000464852 GDF11O95390 407 aa12.61□□□□□ -0.39
TNRC18-209ENST00000464852 GH2P01242 217 aa12.61□□□□□ -0.39
TNRC18-209ENST00000464852 ASNSP08243 561 aa12.61□□□□□ -0.39
TNRC18-209ENST00000464852 COL9A1P20849 921 aa12.61□□□□□ -0.39
TNRC18-209ENST00000464852 NF2P35240 595 aa12.61□□□□□ -0.39
TNRC18-209ENST00000464852 CCT2P78371 535 aaKnown RBP12.61□□□□□ -0.39
TNRC18-209ENST00000464852 SCRN1Q12765 414 aa12.61□□□□□ -0.39
TNRC18-209ENST00000464852 RRP1BQ14684 758 aaKnown RBP12.61□□□□□ -0.39
TNRC18-209ENST00000464852 CPLX2Q6PUV4 134 aaKnown RBP12.61□□□□□ -0.39
TNRC18-209ENST00000464852 PNMA1Q8ND90 353 aa12.61□□□□□ -0.39
TNRC18-209ENST00000464852 DPF3Q92784 378 aa12.61□□□□□ -0.39
TNRC18-209ENST00000464852 RAPGEFL1Q9UHV5 662 aa12.61□□□□□ -0.39
TNRC18-209ENST00000464852 SYNPO2Q9UMS6 1093 aa12.61□□□□□ -0.39
TNRC18-209ENST00000464852 SMC3Q9UQE7 1217 aa12.61□□□□□ -0.39
TNRC18-209ENST00000464852 STXBP5LQ9Y2K9 1186 aa12.61□□□□□ -0.39
TNRC18-209ENST00000464852 GOLGA8AA7E2F4 631 aa12.6□□□□□ -0.39
TNRC18-209ENST00000464852 CPLX1O14810 134 aa12.6□□□□□ -0.39
TNRC18-209ENST00000464852 CDKL5O76039 1030 aa12.6□□□□□ -0.39
TNRC18-209ENST00000464852 KIF5BP33176 963 aa12.6□□□□□ -0.39
TNRC18-209ENST00000464852 GUCY1A2P33402 732 aa12.6□□□□□ -0.39
TNRC18-209ENST00000464852 SEPT2Q15019 361 aa12.6□□□□□ -0.39
TNRC18-209ENST00000464852 RAB3GAP1Q15042 981 aa12.6□□□□□ -0.39
TNRC18-209ENST00000464852 MICU3Q86XE3 530 aa12.6□□□□□ -0.39
TNRC18-209ENST00000464852 NUP133Q8WUM0 1156 aa12.6□□□□□ -0.39
TNRC18-209ENST00000464852 RBM28Q9NW13 759 aaKnown RBP12.6□□□□□ -0.39
TNRC18-209ENST00000464852 ZBTB21Q9ULJ3 1066 aa12.6□□□□□ -0.39
TNRC18-209ENST00000464852 NID2Q14112 1375 aa12.59□□□□□ -0.39
TNRC18-209ENST00000464852 USP2O75604 605 aaPredicted RBP12.59□□□□□ -0.39
TNRC18-209ENST00000464852 EEF2P13639 858 aaKnown RBP12.59□□□□□ -0.39
TNRC18-209ENST00000464852 PDIA4P13667 645 aaKnown RBP12.59□□□□□ -0.39
TNRC18-209ENST00000464852 ADD1P35611 737 aaKnown RBP12.59□□□□□ -0.39
TNRC18-209ENST00000464852 FKBP1BP68106 108 aa12.59□□□□□ -0.39
TNRC18-209ENST00000464852 JAG1P78504 1218 aa12.59□□□□□ -0.39
TNRC18-209ENST00000464852 ATP2B2Q01814 1243 aa12.59□□□□□ -0.39
TNRC18-209ENST00000464852 RTN1Q16799 776 aa12.59□□□□□ -0.39
TNRC18-209ENST00000464852 Q7L0L9 218 aa12.59□□□□□ -0.39
TNRC18-209ENST00000464852 SIAH1Q8IUQ4 282 aa12.59□□□□□ -0.39
TNRC18-209ENST00000464852 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.59□□□□□ -0.39
TNRC18-209ENST00000464852 CTCFLQ8NI51 663 aaPredicted RBP12.59□□□□□ -0.39
TNRC18-209ENST00000464852 CD99L2Q8TCZ2 262 aa12.59□□□□□ -0.39
TNRC18-209ENST00000464852 NCOA5Q9HCD5 579 aaKnown RBP12.59□□□□□ -0.39
TNRC18-209ENST00000464852 ARHGEF10LQ9HCE6 1279 aa12.59□□□□□ -0.39
TNRC18-209ENST00000464852 GREB1LQ9C091 1923 aaPredicted RBP12.58□□□□□ -0.39
TNRC18-209ENST00000464852 RXRAP19793 462 aa12.58□□□□□ -0.4
TNRC18-209ENST00000464852 GNAQP50148 359 aa12.58□□□□□ -0.4
TNRC18-209ENST00000464852 MAP3K9P80192 1104 aa12.58□□□□□ -0.4
TNRC18-209ENST00000464852 HMGN5P82970 282 aaKnown RBP12.58□□□□□ -0.4
TNRC18-209ENST00000464852 ICA1Q05084 483 aa12.58□□□□□ -0.4
TNRC18-209ENST00000464852 ST3GAL1Q11201 340 aa12.58□□□□□ -0.4
TNRC18-209ENST00000464852 RAB11FIP4Q86YS3 637 aa12.58□□□□□ -0.4
TNRC18-209ENST00000464852 DEFB123Q8N688 67 aa12.58□□□□□ -0.4
TNRC18-209ENST00000464852 SMARCC2Q8TAQ2 1214 aa12.58□□□□□ -0.4
TNRC18-209ENST00000464852 LZTS2Q9BRK4 669 aa12.58□□□□□ -0.4
TNRC18-209ENST00000464852 MYL10Q9BUA6 226 aa12.58□□□□□ -0.4
TNRC18-209ENST00000464852 SH2D4AQ9H788 454 aa12.58□□□□□ -0.4
TNRC18-209ENST00000464852 FAM217BQ9NTX9 383 aaPredicted RBP12.58□□□□□ -0.4
TNRC18-209ENST00000464852 KIF3AQ9Y496 699 aa12.58□□□□□ -0.4
TNRC18-209ENST00000464852 USP17L5A8MUK1 530 aa12.57□□□□□ -0.4
TNRC18-209ENST00000464852 IFNAR1P17181 557 aa12.57□□□□□ -0.4
TNRC18-209ENST00000464852 PDCP20941 246 aa12.57□□□□□ -0.4
TNRC18-209ENST00000464852 SMARCA1P28370 1054 aa12.57□□□□□ -0.4
TNRC18-209ENST00000464852 CDC27P30260 824 aa12.57□□□□□ -0.4
TNRC18-209ENST00000464852 IREB2P48200 963 aaKnown RBP12.57□□□□□ -0.4
TNRC18-209ENST00000464852 GRM4Q14833 912 aa12.57□□□□□ -0.4
TNRC18-209ENST00000464852 NTRK3Q16288 839 aa12.57□□□□□ -0.4
TNRC18-209ENST00000464852 SHROOM1Q2M3G4 852 aaPredicted RBP12.57□□□□□ -0.4
TNRC18-209ENST00000464852 CCDC144CPQ8IYA2 1237 aa12.57□□□□□ -0.4
TNRC18-209ENST00000464852 SCYL3Q8IZE3 742 aa12.57□□□□□ -0.4
TNRC18-209ENST00000464852 NSUN7Q8NE18 718 aaKnown RBP12.57□□□□□ -0.4
TNRC18-209ENST00000464852 WRNIP1Q96S55 665 aa12.57□□□□□ -0.4
TNRC18-209ENST00000464852 PICK1Q9NRD5 415 aa12.57□□□□□ -0.4
TNRC18-209ENST00000464852 CIZ1Q9ULV3 898 aaPredicted RBP12.57□□□□□ -0.4
TNRC18-209ENST00000464852 TMX2Q9Y320 296 aa12.57□□□□□ -0.4
TNRC18-209ENST00000464852 A0A1W2PPC1 479 aa12.56□□□□□ -0.4
TNRC18-209ENST00000464852 PALM3A6NDB9 673 aaPredicted RBP12.56□□□□□ -0.4
TNRC18-209ENST00000464852 UNCXA6NJT0 531 aa12.56□□□□□ -0.4
TNRC18-209ENST00000464852 ABCB7O75027 752 aa12.56□□□□□ -0.4
TNRC18-209ENST00000464852 CTDNEP1O95476 244 aa12.56□□□□□ -0.4
TNRC18-209ENST00000464852 MYCP01106 439 aaPredicted RBP12.56□□□□□ -0.4
TNRC18-209ENST00000464852 PARP1P09874 1014 aaKnown RBP12.56□□□□□ -0.4
TNRC18-209ENST00000464852 SNHG28P0DPA3 235 aa12.56□□□□□ -0.4
TNRC18-209ENST00000464852 GJB2P29033 226 aa12.56□□□□□ -0.4
TNRC18-209ENST00000464852 INPP5BP32019 993 aa12.56□□□□□ -0.4
TNRC18-209ENST00000464852 SREBF2Q12772 1141 aa12.56□□□□□ -0.4
TNRC18-209ENST00000464852 NOL9Q5SY16 702 aaKnown RBP12.56□□□□□ -0.4
TNRC18-209ENST00000464852 CLEC10AQ8IUN9 316 aa12.56□□□□□ -0.4
TNRC18-209ENST00000464852 FAM184AQ8NB25 1140 aa12.56□□□□□ -0.4
TNRC18-209ENST00000464852 GMCL1P1Q8NEA9 526 aa12.56□□□□□ -0.4
TNRC18-209ENST00000464852 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.56□□□□□ -0.42e-6■■■□□ 15.6
TNRC18-209ENST00000464852 ZKSCAN4Q969J2 545 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms