RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 TCRBV5S4A2TA0A5A2 114 aa17.64■□□□□ 0.41
MCF2L-220ENST00000464800 CLTBP09497 229 aa17.64■□□□□ 0.41
MCF2L-220ENST00000464800 TMEM132BQ14DG7 1078 aa17.64■□□□□ 0.41
MCF2L-220ENST00000464800 RNF180Q86T96 592 aa17.64■□□□□ 0.41
MCF2L-220ENST00000464800 RHPN1Q8TCX5 695 aa17.64■□□□□ 0.41
MCF2L-220ENST00000464800 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.64■□□□□ 0.41
MCF2L-220ENST00000464800 MYLIPQ8WY64 445 aa17.64■□□□□ 0.41
MCF2L-220ENST00000464800 RNPC3Q96LT9 517 aaKnown RBP17.64■□□□□ 0.41
MCF2L-220ENST00000464800 MMP19Q99542 508 aa17.64■□□□□ 0.41
MCF2L-220ENST00000464800 TTYH1Q9H313 450 aaPredicted RBP17.64■□□□□ 0.41
MCF2L-220ENST00000464800 ARMT1Q9H993 441 aa17.64■□□□□ 0.41
MCF2L-220ENST00000464800 TACC3Q9Y6A5 838 aa17.64■□□□□ 0.41
MCF2L-220ENST00000464800 FOSL2P15408 326 aa17.63■□□□□ 0.41
MCF2L-220ENST00000464800 SIAH1Q8IUQ4 282 aa17.63■□□□□ 0.41
MCF2L-220ENST00000464800 AMOTL1Q8IY63 956 aa17.63■□□□□ 0.41
MCF2L-220ENST00000464800 CLASRPQ8N2M8 674 aaKnown RBP17.63■□□□□ 0.41
MCF2L-220ENST00000464800 CCDC17Q96LX7 622 aa17.63■□□□□ 0.41
MCF2L-220ENST00000464800 ATP8A2Q9NTI2 1148 aa17.63■□□□□ 0.41
MCF2L-220ENST00000464800 TMEM265A0A087WTH1 108 aa17.62■□□□□ 0.41
MCF2L-220ENST00000464800 MBD4O95243 580 aa17.62■□□□□ 0.41
MCF2L-220ENST00000464800 PGK1P00558 417 aa17.62■□□□□ 0.41
MCF2L-220ENST00000464800 PGK2P07205 417 aa17.62■□□□□ 0.41
MCF2L-220ENST00000464800 KCTD2Q14681 263 aa17.62■□□□□ 0.41
MCF2L-220ENST00000464800 RIOX2Q8IUF8 465 aa17.62■□□□□ 0.41
MCF2L-220ENST00000464800 TINF2Q9BSI4 451 aa17.62■□□□□ 0.41
MCF2L-220ENST00000464800 EYSQ5T1H1 3165 aa17.61■□□□□ 0.41
MCF2L-220ENST00000464800 A0A1W2PQ45 241 aaPredicted RBP17.61■□□□□ 0.41
MCF2L-220ENST00000464800 A0A1W2PQY0 241 aa17.61■□□□□ 0.41
MCF2L-220ENST00000464800 PQBP1O60828 265 aaKnown RBP17.61■□□□□ 0.41
MCF2L-220ENST00000464800 IFIT2P09913 472 aaKnown RBP17.61■□□□□ 0.41
MCF2L-220ENST00000464800 AKR1A1P14550 325 aa17.61■□□□□ 0.41
MCF2L-220ENST00000464800 RAG1P15918 1043 aa17.61■□□□□ 0.41
MCF2L-220ENST00000464800 ITGB8P26012 769 aa17.61■□□□□ 0.41
MCF2L-220ENST00000464800 COPB2P35606 906 aa17.61■□□□□ 0.41
MCF2L-220ENST00000464800 KIF1BPQ96EK5 621 aa17.61■□□□□ 0.41
MCF2L-220ENST00000464800 GOPCQ9HD26 462 aa17.61■□□□□ 0.41
MCF2L-220ENST00000464800 ADAMTS5Q9UNA0 930 aa17.61■□□□□ 0.41
MCF2L-220ENST00000464800 DIS3Q9Y2L1 958 aaKnown RBP17.61■□□□□ 0.41
MCF2L-220ENST00000464800 GREB1LQ9C091 1923 aaPredicted RBP17.6■□□□□ 0.41
MCF2L-220ENST00000464800 APBB1O00213 710 aa17.6■□□□□ 0.41
MCF2L-220ENST00000464800 KIAA0355O15063 1070 aa17.6■□□□□ 0.41
MCF2L-220ENST00000464800 PRKAB2O43741 272 aa17.6■□□□□ 0.41
MCF2L-220ENST00000464800 EEF2P13639 858 aaKnown RBP17.6■□□□□ 0.41
MCF2L-220ENST00000464800 CDK8P49336 464 aa17.6■□□□□ 0.41
MCF2L-220ENST00000464800 FPGSQ05932 587 aa17.6■□□□□ 0.41
MCF2L-220ENST00000464800 ZNF792Q3KQV3 632 aa17.6■□□□□ 0.41
MCF2L-220ENST00000464800 C12orf60Q5U649 245 aa17.6■□□□□ 0.41
MCF2L-220ENST00000464800 DDRGK1Q96HY6 314 aa17.6■□□□□ 0.41
MCF2L-220ENST00000464800 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.6■□□□□ 0.41
MCF2L-220ENST00000464800 FBXO28Q9NVF7 368 aa17.6■□□□□ 0.41
MCF2L-220ENST00000464800 PAG1Q9NWQ8 432 aa17.6■□□□□ 0.41
MCF2L-220ENST00000464800 CNPY2Q9Y2B0 182 aa17.6■□□□□ 0.41
MCF2L-220ENST00000464800 CYP2D7A0A087X1C5 515 aa17.59■□□□□ 0.41
MCF2L-220ENST00000464800 VWA5AO00534 786 aa17.59■□□□□ 0.41
MCF2L-220ENST00000464800 RAD21O60216 631 aa17.59■□□□□ 0.41
MCF2L-220ENST00000464800 TAL1P17542 331 aaPredicted RBP17.59■□□□□ 0.41
MCF2L-220ENST00000464800 ADD2P35612 726 aa17.59■□□□□ 0.41
MCF2L-220ENST00000464800 STAT3P40763 770 aa17.59■□□□□ 0.41
MCF2L-220ENST00000464800 EPHB4P54760 987 aa17.59■□□□□ 0.41
MCF2L-220ENST00000464800 C16orf86Q6ZW13 317 aa17.59■□□□□ 0.41
MCF2L-220ENST00000464800 LENG1Q96BZ8 264 aaPredicted RBP17.59■□□□□ 0.41
MCF2L-220ENST00000464800 BCL11AQ9H165 835 aa17.59■□□□□ 0.41
MCF2L-220ENST00000464800 KANSL2Q9H9L4 492 aa17.59■□□□□ 0.41
MCF2L-220ENST00000464800 TMEM39AQ9NV64 488 aa17.59■□□□□ 0.41
MCF2L-220ENST00000464800 PPP1R9AQ9ULJ8 1098 aa17.59■□□□□ 0.41
MCF2L-220ENST00000464800 USP17L12C9JPN9 530 aa17.58■□□□□ 0.4
MCF2L-220ENST00000464800 USP17L21D6R901 530 aa17.58■□□□□ 0.4
MCF2L-220ENST00000464800 ZNF865P0CJ78 1059 aaPredicted RBP17.58■□□□□ 0.4
MCF2L-220ENST00000464800 TSEN34Q9BSV6 310 aaKnown RBP17.58■□□□□ 0.4
MCF2L-220ENST00000464800 ZNF214Q9UL59 606 aaPredicted RBP17.58■□□□□ 0.4
MCF2L-220ENST00000464800 SYNRGQ9UMZ2 1314 aa17.57■□□□□ 0.4
MCF2L-220ENST00000464800 CDH23Q9H251 3354 aa17.57■□□□□ 0.4
MCF2L-220ENST00000464800 DCDC2CA8MYV0 355 aa17.57■□□□□ 0.4
MCF2L-220ENST00000464800 SMIM22K7EJ46 135 aa17.57■□□□□ 0.4
MCF2L-220ENST00000464800 ADAMTS4O75173 837 aa17.57■□□□□ 0.4
MCF2L-220ENST00000464800 SLFNL1Q499Z3 407 aa17.57■□□□□ 0.4
MCF2L-220ENST00000464800 FAM83BQ5T0W9 1011 aa17.57■□□□□ 0.4
MCF2L-220ENST00000464800 ANKRD33Q7Z3H0 272 aa17.57■□□□□ 0.4
MCF2L-220ENST00000464800 PANK1Q8TE04 598 aa17.57■□□□□ 0.4
MCF2L-220ENST00000464800 NUP133Q8WUM0 1156 aa17.57■□□□□ 0.4
MCF2L-220ENST00000464800 SYMPKQ92797 1274 aaKnown RBP17.57■□□□□ 0.4
MCF2L-220ENST00000464800 STARD7Q9NQZ5 370 aa17.57■□□□□ 0.4
MCF2L-220ENST00000464800 MYH4Q9Y623 1939 aa17.57■□□□□ 0.4
MCF2L-220ENST00000464800 HMMRO75330 724 aa17.56■□□□□ 0.4
MCF2L-220ENST00000464800 DNAJB2P25686 324 aa17.56■□□□□ 0.4
MCF2L-220ENST00000464800 ACLYP53396 1101 aa17.56■□□□□ 0.4
MCF2L-220ENST00000464800 FAAP100Q0VG06 881 aa17.56■□□□□ 0.4
MCF2L-220ENST00000464800 MSL3Q8N5Y2 521 aaKnown RBP17.56■□□□□ 0.4
MCF2L-220ENST00000464800 REPS2Q8NFH8 660 aa17.56■□□□□ 0.4
MCF2L-220ENST00000464800 TOX2Q96NM4 488 aa17.56■□□□□ 0.4
MCF2L-220ENST00000464800 BOLA2Q9H3K6 86 aa17.56■□□□□ 0.4
MCF2L-220ENST00000464800 SLC4A4Q9Y6R1 1079 aa17.56■□□□□ 0.4
MCF2L-220ENST00000464800 VCANP13611 3396 aa17.56■□□□□ 0.4
MCF2L-220ENST00000464800 MCM3APO60318 1980 aa17.55■□□□□ 0.4
MCF2L-220ENST00000464800 ZBED9Q6R2W3 1325 aa17.55■□□□□ 0.4
MCF2L-220ENST00000464800 SYNGAP1Q96PV0 1343 aa17.55■□□□□ 0.4
MCF2L-220ENST00000464800 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.55■□□□□ 0.4
MCF2L-220ENST00000464800 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.55■□□□□ 0.4
MCF2L-220ENST00000464800 MOXD2PA6NHM9 499 aa17.55■□□□□ 0.4
MCF2L-220ENST00000464800 HNRNPUQ00839 825 aaKnown RBP eCLIP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms