RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 KCNN1Q92952 543 aa7.31□□□□□ -1.24
ITGB1-208ENST00000464001 NKD1Q969G9 470 aa7.31□□□□□ -1.24
ITGB1-208ENST00000464001 ATG4CQ96DT6 458 aa7.31□□□□□ -1.24
ITGB1-208ENST00000464001 NT5C1AQ9BXI3 368 aa7.31□□□□□ -1.24
ITGB1-208ENST00000464001 HDAC8Q9BY41 377 aa7.31□□□□□ -1.24
ITGB1-208ENST00000464001 CLEC3AO75596 197 aa7.3□□□□□ -1.24
ITGB1-208ENST00000464001 RPL10P27635 214 aaKnown RBP7.3□□□□□ -1.24
ITGB1-208ENST00000464001 CFPP27918 469 aa7.3□□□□□ -1.24
ITGB1-208ENST00000464001 PCBP3P57721 371 aaKnown RBP7.3□□□□□ -1.24
ITGB1-208ENST00000464001 FBLN7Q53RD9 439 aa7.3□□□□□ -1.24
ITGB1-208ENST00000464001 SPOCD1Q6ZMY3 1216 aa7.3□□□□□ -1.24
ITGB1-208ENST00000464001 USHBP1Q8N6Y0 703 aa7.3□□□□□ -1.24
ITGB1-208ENST00000464001 LINC01599Q8WXQ3 324 aa7.3□□□□□ -1.24
ITGB1-208ENST00000464001 TCTN2Q96GX1 697 aa7.3□□□□□ -1.24
ITGB1-208ENST00000464001 KCNK12Q9HB15 430 aa7.3□□□□□ -1.24
ITGB1-208ENST00000464001 ZNF281Q9Y2X9 895 aa7.3□□□□□ -1.24
ITGB1-208ENST00000464001 KRT1P04264 644 aa7.29□□□□□ -1.24
ITGB1-208ENST00000464001 POLR2BP30876 1174 aaKnown RBP7.29□□□□□ -1.24
ITGB1-208ENST00000464001 TIGD5Q53EQ6 642 aa7.29□□□□□ -1.24
ITGB1-208ENST00000464001 ATG14Q6ZNE5 492 aa7.29□□□□□ -1.24
ITGB1-208ENST00000464001 WAPLQ7Z5K2 1190 aa7.29□□□□□ -1.24
ITGB1-208ENST00000464001 KIAA0825Q8IV33 1275 aa7.29□□□□□ -1.24
ITGB1-208ENST00000464001 SLITRK4Q8IW52 837 aa7.29□□□□□ -1.24
ITGB1-208ENST00000464001 LRRC56Q8IYG6 542 aaPredicted RBP7.29□□□□□ -1.24
ITGB1-208ENST00000464001 EBF1Q9UH73 591 aa7.29□□□□□ -1.24
ITGB1-208ENST00000464001 GPR160Q9UJ42 338 aa7.29□□□□□ -1.24
ITGB1-208ENST00000464001 ZMYM5Q9UJ78 669 aa7.29□□□□□ -1.24
ITGB1-208ENST00000464001 YBX2Q9Y2T7 364 aaKnown RBP7.29□□□□□ -1.24
ITGB1-208ENST00000464001 TCAF2A6NFQ2 919 aa7.28□□□□□ -1.24
ITGB1-208ENST00000464001 ETV2O00321 342 aaPredicted RBP7.28□□□□□ -1.24
ITGB1-208ENST00000464001 MED14OSP0DP75 135 aa7.28□□□□□ -1.24
ITGB1-208ENST00000464001 NME1P15531 152 aaKnown RBP7.28□□□□□ -1.24
ITGB1-208ENST00000464001 ZNF16P17020 682 aaPredicted RBP7.28□□□□□ -1.24
ITGB1-208ENST00000464001 GLDCP23378 1020 aa7.28□□□□□ -1.24
ITGB1-208ENST00000464001 TMCO4Q5TGY1 634 aa7.28□□□□□ -1.24
ITGB1-208ENST00000464001 TMC3Q7Z5M5 1100 aa7.28□□□□□ -1.24
ITGB1-208ENST00000464001 INTS4Q96HW7 963 aaKnown RBP7.28□□□□□ -1.24
ITGB1-208ENST00000464001 SPON2Q9BUD6 331 aa7.28□□□□□ -1.24
ITGB1-208ENST00000464001 FOXP3Q9BZS1 431 aa7.28□□□□□ -1.24
ITGB1-208ENST00000464001 TCFL5Q9UL49 500 aa7.28□□□□□ -1.24
ITGB1-208ENST00000464001 ZBTB7CA1YPR0 619 aa7.27□□□□□ -1.25
ITGB1-208ENST00000464001 MEIS3P2A8K0S8 358 aa7.27□□□□□ -1.25
ITGB1-208ENST00000464001 NPIPB6E9PJ23 425 aa7.27□□□□□ -1.25
ITGB1-208ENST00000464001 PDE6BP35913 854 aa7.27□□□□□ -1.25
ITGB1-208ENST00000464001 SIAH1Q8IUQ4 282 aa7.27□□□□□ -1.25
ITGB1-208ENST00000464001 LINC00116Q8NCU8 138 aa7.27□□□□□ -1.25
ITGB1-208ENST00000464001 EAF1Q96JC9 268 aaPredicted RBP7.27□□□□□ -1.25
ITGB1-208ENST00000464001 G6PC3Q9BUM1 346 aa7.27□□□□□ -1.25
ITGB1-208ENST00000464001 TNFRSF10CO14798 259 aa7.26□□□□□ -1.25
ITGB1-208ENST00000464001 SIGLEC6O43699 453 aa7.26□□□□□ -1.25
ITGB1-208ENST00000464001 PSPNO60542 156 aa7.26□□□□□ -1.25
ITGB1-208ENST00000464001 ZNF76P36508 570 aa7.26□□□□□ -1.25
ITGB1-208ENST00000464001 KIR2DL1P43626 348 aaPredicted RBP7.26□□□□□ -1.25
ITGB1-208ENST00000464001 KIR2DL2P43627 348 aaPredicted RBP7.26□□□□□ -1.25
ITGB1-208ENST00000464001 SNW1Q13573 536 aaKnown RBP7.26□□□□□ -1.25
ITGB1-208ENST00000464001 SLC14A2Q15849 920 aa7.26□□□□□ -1.25
ITGB1-208ENST00000464001 KCNA10Q16322 511 aa7.26□□□□□ -1.25
ITGB1-208ENST00000464001 C1QL4Q86Z23 238 aa7.26□□□□□ -1.25
ITGB1-208ENST00000464001 ZNF512BQ96KM6 892 aaPredicted RBP7.26□□□□□ -1.25
ITGB1-208ENST00000464001 PRDM14Q9GZV8 571 aa7.26□□□□□ -1.25
ITGB1-208ENST00000464001 ANTXR1Q9H6X2 564 aa7.26□□□□□ -1.25
ITGB1-208ENST00000464001 CD320Q9NPF0 282 aa7.26□□□□□ -1.25
ITGB1-208ENST00000464001 PEX10O60683 326 aa7.25□□□□□ -1.25
ITGB1-208ENST00000464001 PRAMEF1O95521 474 aa7.25□□□□□ -1.25
ITGB1-208ENST00000464001 SYPP08247 313 aa7.25□□□□□ -1.25
ITGB1-208ENST00000464001 LDLRAD1Q5T700 205 aa7.25□□□□□ -1.25
ITGB1-208ENST00000464001 LCE1DQ5T752 114 aa7.25□□□□□ -1.25
ITGB1-208ENST00000464001 TMEM132EQ6IEE7 984 aa7.25□□□□□ -1.25
ITGB1-208ENST00000464001 ZNF605Q86T29 641 aa7.25□□□□□ -1.25
ITGB1-208ENST00000464001 MAP6Q96JE9 813 aa7.25□□□□□ -1.25
ITGB1-208ENST00000464001 MKRN2Q9H000 416 aaKnown RBP7.25□□□□□ -1.25
ITGB1-208ENST00000464001 ZNF552Q9H707 407 aaPredicted RBP7.25□□□□□ -1.25
ITGB1-208ENST00000464001 CHST7Q9NS84 486 aa7.25□□□□□ -1.25
ITGB1-208ENST00000464001 FBXL21Q9UKT6 434 aa7.25□□□□□ -1.25
ITGB1-208ENST00000464001 SMG5Q9UPR3 1016 aaKnown RBP7.25□□□□□ -1.25
ITGB1-208ENST00000464001 ZSCAN22P10073 491 aaPredicted RBP7.24□□□□□ -1.25
ITGB1-208ENST00000464001 IMPDH2P12268 514 aa7.24□□□□□ -1.25
ITGB1-208ENST00000464001 ENDOUP21128 410 aaKnown RBP7.24□□□□□ -1.25
ITGB1-208ENST00000464001 INTS3Q68E01 1043 aaKnown RBP7.24□□□□□ -1.25
ITGB1-208ENST00000464001 CIAPIN1Q6FI81 312 aa7.24□□□□□ -1.25
ITGB1-208ENST00000464001 USP48Q86UV5 1035 aa7.24□□□□□ -1.25
ITGB1-208ENST00000464001 TMEM192Q8IY95 271 aa7.24□□□□□ -1.25
ITGB1-208ENST00000464001 SHISA4Q96DD7 197 aa7.24□□□□□ -1.25
ITGB1-208ENST00000464001 DHRS1Q96LJ7 313 aa7.24□□□□□ -1.25
ITGB1-208ENST00000464001 SLC6A18Q96N87 628 aa7.24□□□□□ -1.25
ITGB1-208ENST00000464001 BACH2Q9BYV9 841 aa7.24□□□□□ -1.25
ITGB1-208ENST00000464001 MCOLN1Q9GZU1 580 aa7.24□□□□□ -1.25
ITGB1-208ENST00000464001 METTL5Q9NRN9 209 aaKnown RBP7.24□□□□□ -1.25
ITGB1-208ENST00000464001 PCDHB12Q9Y5F1 795 aa7.24□□□□□ -1.25
ITGB1-208ENST00000464001 TMEM82A0PJX8 343 aa7.23□□□□□ -1.25
ITGB1-208ENST00000464001 OR14I1A6ND48 311 aa7.23□□□□□ -1.25
ITGB1-208ENST00000464001 NRDCO43847 1150 aa7.23□□□□□ -1.25
ITGB1-208ENST00000464001 FKTNO75072 461 aa7.23□□□□□ -1.25
ITGB1-208ENST00000464001 SEMA7AO75326 666 aa7.23□□□□□ -1.25
ITGB1-208ENST00000464001 USP2O75604 605 aaPredicted RBP7.23□□□□□ -1.25
ITGB1-208ENST00000464001 BBS9Q3SYG4 887 aa7.23□□□□□ -1.25
ITGB1-208ENST00000464001 CEP128Q6ZU80 1094 aa7.23□□□□□ -1.25
ITGB1-208ENST00000464001 NLRX1Q86UT6 975 aa7.23□□□□□ -1.25
ITGB1-208ENST00000464001 SLC9A7Q96T83 725 aa7.23□□□□□ -1.25
ITGB1-208ENST00000464001 NOTOA8MTQ0 251 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms