RNA–Protein interactions for RNA: ENST00000463936.1

RTN4R-204, Transcript of reticulon 4 receptor, humanhuman

TSL 4

Gene RTN4R, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-204ENST00000463936 CCDC17Q96LX7 622 aa17.29■□□□□ 0.36
RTN4R-204ENST00000463936 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.29■□□□□ 0.36
RTN4R-204ENST00000463936 DCTPP1Q9H773 170 aa17.29■□□□□ 0.36
RTN4R-204ENST00000463936 WDR46O15213 610 aaKnown RBP17.28■□□□□ 0.36
RTN4R-204ENST00000463936 PGK2P07205 417 aa17.28■□□□□ 0.36
RTN4R-204ENST00000463936 TAL1P17542 331 aaPredicted RBP17.28■□□□□ 0.36
RTN4R-204ENST00000463936 NCAPG2Q86XI2 1143 aa17.28■□□□□ 0.36
RTN4R-204ENST00000463936 MAML3Q96JK9 1138 aa17.28■□□□□ 0.36
RTN4R-204ENST00000463936 NUP88Q99567 741 aaPredicted RBP17.28■□□□□ 0.36
RTN4R-204ENST00000463936 UBE2OQ9C0C9 1292 aaKnown RBP17.28■□□□□ 0.36
RTN4R-204ENST00000463936 ARHGEF10LQ9HCE6 1279 aa17.28■□□□□ 0.36
RTN4R-204ENST00000463936 EPB41L4AQ9HCS5 686 aaPredicted RBP17.28■□□□□ 0.36
RTN4R-204ENST00000463936 DNM1LO00429 736 aa17.27■□□□□ 0.36
RTN4R-204ENST00000463936 MB21D1Q8N884 522 aa17.27■□□□□ 0.36
RTN4R-204ENST00000463936 OTUD7AQ8TE49 926 aaPredicted RBP17.27■□□□□ 0.36
RTN4R-204ENST00000463936 MROH8Q9H579 483 aa17.27■□□□□ 0.36
RTN4R-204ENST00000463936 KANSL2Q9H9L4 492 aa17.27■□□□□ 0.36
RTN4R-204ENST00000463936 ECHDC1Q9NTX5 307 aa17.27■□□□□ 0.36
RTN4R-204ENST00000463936 ZNF214Q9UL59 606 aaPredicted RBP17.27■□□□□ 0.36
RTN4R-204ENST00000463936 SUPT16HQ9Y5B9 1047 aaKnown RBP17.27■□□□□ 0.36
RTN4R-204ENST00000463936 LTBP2Q14767 1821 aa17.26■□□□□ 0.35
RTN4R-204ENST00000463936 M0R2C6 588 aa17.26■□□□□ 0.35
RTN4R-204ENST00000463936 VWA5AO00534 786 aa17.26■□□□□ 0.35
RTN4R-204ENST00000463936 SBK1Q52WX2 424 aa17.26■□□□□ 0.35
RTN4R-204ENST00000463936 FAM83BQ5T0W9 1011 aa17.26■□□□□ 0.35
RTN4R-204ENST00000463936 ABRAQ8N0Z2 381 aa17.26■□□□□ 0.35
RTN4R-204ENST00000463936 KBTBD3Q8NAB2 608 aa17.26■□□□□ 0.35
RTN4R-204ENST00000463936 SEC62Q99442 399 aaKnown RBP17.26■□□□□ 0.35
RTN4R-204ENST00000463936 RIPK3Q9Y572 518 aa17.26■□□□□ 0.35
RTN4R-204ENST00000463936 IGKV6D-41A0A0C4DH26 115 aa17.25■□□□□ 0.35
RTN4R-204ENST00000463936 SEPT4O43236 478 aa17.25■□□□□ 0.35
RTN4R-204ENST00000463936 RTP1P59025 263 aa17.25■□□□□ 0.35
RTN4R-204ENST00000463936 ZNF792Q3KQV3 632 aa17.25■□□□□ 0.35
RTN4R-204ENST00000463936 FAM47AQ5JRC9 791 aa17.25■□□□□ 0.35
RTN4R-204ENST00000463936 SLC39A5Q6ZMH5 540 aa17.25■□□□□ 0.35
RTN4R-204ENST00000463936 RIOX2Q8IUF8 465 aa17.25■□□□□ 0.35
RTN4R-204ENST00000463936 DEFB123Q8N688 67 aa17.25■□□□□ 0.35
RTN4R-204ENST00000463936 MTMR10Q9NXD2 777 aa17.25■□□□□ 0.35
RTN4R-204ENST00000463936 PPP1R9AQ9ULJ8 1098 aa17.25■□□□□ 0.35
RTN4R-204ENST00000463936 PLXNA1Q9UIW2 1896 aa17.24■□□□□ 0.35
RTN4R-204ENST00000463936 MSCO60682 206 aa17.24■□□□□ 0.35
RTN4R-204ENST00000463936 AAMPQ13685 434 aa17.24■□□□□ 0.35
RTN4R-204ENST00000463936 LRRC41Q15345 812 aa17.24■□□□□ 0.35
RTN4R-204ENST00000463936 SH3RF1Q7Z6J0 888 aa17.24■□□□□ 0.35
RTN4R-204ENST00000463936 LENG1Q96BZ8 264 aaPredicted RBP17.24■□□□□ 0.35
RTN4R-204ENST00000463936 A0A0C4DFX4 3053 aa17.24■□□□□ 0.35
RTN4R-204ENST00000463936 MINDY4BA8MYZ0 360 aa17.23■□□□□ 0.35
RTN4R-204ENST00000463936 RNF113AO15541 343 aaKnown RBP17.23■□□□□ 0.35
RTN4R-204ENST00000463936 PRDM1O75626 825 aa17.23■□□□□ 0.35
RTN4R-204ENST00000463936 ZNF865P0CJ78 1059 aaPredicted RBP17.23■□□□□ 0.35
RTN4R-204ENST00000463936 FCER1AP12319 257 aa17.23■□□□□ 0.35
RTN4R-204ENST00000463936 ITGB8P26012 769 aa17.23■□□□□ 0.35
RTN4R-204ENST00000463936 STAT3P40763 770 aa17.23■□□□□ 0.35
RTN4R-204ENST00000463936 ADCYAP1R1P41586 468 aa17.23■□□□□ 0.35
RTN4R-204ENST00000463936 SNX17Q15036 470 aa17.23■□□□□ 0.35
RTN4R-204ENST00000463936 GPR153Q6NV75 609 aa17.23■□□□□ 0.35
RTN4R-204ENST00000463936 FERMT2Q96AC1 680 aa17.23■□□□□ 0.35
RTN4R-204ENST00000463936 TACC3Q9Y6A5 838 aa17.23■□□□□ 0.35
RTN4R-204ENST00000463936 ROBO3Q96MS0 1386 aa17.23■□□□□ 0.35
RTN4R-204ENST00000463936 F5H6K3 240 aa17.22■□□□□ 0.35
RTN4R-204ENST00000463936 FOXP2O15409 715 aa17.22■□□□□ 0.35
RTN4R-204ENST00000463936 GPAA1O43292 621 aa17.22■□□□□ 0.35
RTN4R-204ENST00000463936 NDUFB10O96000 172 aa17.22■□□□□ 0.35
RTN4R-204ENST00000463936 IRX5P78411 483 aaPredicted RBP17.22■□□□□ 0.35
RTN4R-204ENST00000463936 KLRC3Q07444 240 aa17.22■□□□□ 0.35
RTN4R-204ENST00000463936 TRIM60Q495X7 471 aa17.22■□□□□ 0.35
RTN4R-204ENST00000463936 ZSCAN25Q6NSZ9 544 aa17.22■□□□□ 0.35
RTN4R-204ENST00000463936 EXOC6Q8TAG9 804 aa17.22■□□□□ 0.35
RTN4R-204ENST00000463936 PI4K2BQ8TCG2 481 aa17.22■□□□□ 0.35
RTN4R-204ENST00000463936 APPBP2Q92624 585 aa17.22■□□□□ 0.35
RTN4R-204ENST00000463936 MMP19Q99542 508 aa17.22■□□□□ 0.35
RTN4R-204ENST00000463936 SH2D4AQ9H788 454 aa17.22■□□□□ 0.35
RTN4R-204ENST00000463936 NYAP2Q9P242 653 aa17.22■□□□□ 0.35
RTN4R-204ENST00000463936 ARPP21Q9UBL0 812 aaPredicted RBP17.22■□□□□ 0.35
RTN4R-204ENST00000463936 ATP11BQ9Y2G3 1177 aa17.22■□□□□ 0.35
RTN4R-204ENST00000463936 TRIM43BA6NCK2 446 aa17.21■□□□□ 0.35
RTN4R-204ENST00000463936 POTEB2H3BUK9 544 aa17.21■□□□□ 0.35
RTN4R-204ENST00000463936 RAD21O60216 631 aa17.21■□□□□ 0.35
RTN4R-204ENST00000463936 SLC25A27O95847 323 aa17.21■□□□□ 0.35
RTN4R-204ENST00000463936 HDAC1Q13547 482 aaPredicted RBP17.21■□□□□ 0.35
RTN4R-204ENST00000463936 C9orf50Q5SZB4 431 aa17.21■□□□□ 0.35
RTN4R-204ENST00000463936 GIMAP6Q6P9H5 292 aa17.21■□□□□ 0.35
RTN4R-204ENST00000463936 ARRDC4Q8NCT1 418 aa17.21■□□□□ 0.35
RTN4R-204ENST00000463936 TRIM43Q96BQ3 446 aaPredicted RBP17.21■□□□□ 0.35
RTN4R-204ENST00000463936 FGD4Q96M96 766 aa17.21■□□□□ 0.35
RTN4R-204ENST00000463936 TINF2Q9BSI4 451 aa17.21■□□□□ 0.35
RTN4R-204ENST00000463936 INCENPQ9NQS7 918 aa17.21■□□□□ 0.35
RTN4R-204ENST00000463936 CLIP2Q9UDT6 1046 aa17.21■□□□□ 0.35
RTN4R-204ENST00000463936 EYSQ5T1H1 3165 aa17.2■□□□□ 0.34
RTN4R-204ENST00000463936 MYH4Q9Y623 1939 aa17.2■□□□□ 0.34
RTN4R-204ENST00000463936 DNAJC25-GNG10A0A024R161 153 aa17.2■□□□□ 0.34
RTN4R-204ENST00000463936 ADCY6O43306 1168 aa17.2■□□□□ 0.34
RTN4R-204ENST00000463936 SNAI1O95863 264 aaPredicted RBP17.2■□□□□ 0.34
RTN4R-204ENST00000463936 PGK1P00558 417 aa17.2■□□□□ 0.34
RTN4R-204ENST00000463936 MYCNP04198 464 aaPredicted RBP17.2■□□□□ 0.34
RTN4R-204ENST00000463936 SLC17A8Q8NDX2 589 aa17.2■□□□□ 0.34
RTN4R-204ENST00000463936 CEP95Q96GE4 821 aa17.2■□□□□ 0.34
RTN4R-204ENST00000463936 GOPCQ9HD26 462 aa17.2■□□□□ 0.34
RTN4R-204ENST00000463936 SHHQ15465 462 aa17.19■□□□□ 0.34
RTN4R-204ENST00000463936 AMOTL1Q8IY63 956 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms