RNA–Protein interactions for RNA: ENST00000463914.1

TMEM54-203, Transcript of transmembrane protein 54, humanhuman

TSL 5

Gene TMEM54, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-203ENST00000463914 PAG1Q9NWQ8 432 aa12.36□□□□□ -0.43
TMEM54-203ENST00000463914 TMX2Q9Y320 296 aa12.36□□□□□ -0.43
TMEM54-203ENST00000463914 MCM3APO60318 1980 aa12.36□□□□□ -0.43
TMEM54-203ENST00000463914 WDR46O15213 610 aaKnown RBP12.35□□□□□ -0.43
TMEM54-203ENST00000463914 PGK2P07205 417 aa12.35□□□□□ -0.43
TMEM54-203ENST00000463914 ABRAQ8N0Z2 381 aa12.35□□□□□ -0.43
TMEM54-203ENST00000463914 LENG1Q96BZ8 264 aaPredicted RBP12.35□□□□□ -0.43
TMEM54-203ENST00000463914 SH2D4AQ9H788 454 aa12.35□□□□□ -0.43
TMEM54-203ENST00000463914 ROBO3Q96MS0 1386 aa12.34□□□□□ -0.43
TMEM54-203ENST00000463914 TRIM43BA6NCK2 446 aa12.34□□□□□ -0.43
TMEM54-203ENST00000463914 USP17L12C9JPN9 530 aa12.34□□□□□ -0.43
TMEM54-203ENST00000463914 USP17L21D6R901 530 aa12.34□□□□□ -0.43
TMEM54-203ENST00000463914 FCER1AP12319 257 aa12.34□□□□□ -0.43
TMEM54-203ENST00000463914 EEF2P13639 858 aaKnown RBP12.34□□□□□ -0.43
TMEM54-203ENST00000463914 TAL1P17542 331 aaPredicted RBP12.34□□□□□ -0.43
TMEM54-203ENST00000463914 CDK8P49336 464 aa12.34□□□□□ -0.43
TMEM54-203ENST00000463914 C12orf60Q5U649 245 aa12.34□□□□□ -0.43
TMEM54-203ENST00000463914 C16orf86Q6ZW13 317 aa12.34□□□□□ -0.43
TMEM54-203ENST00000463914 TRIM43Q96BQ3 446 aaPredicted RBP12.34□□□□□ -0.43
TMEM54-203ENST00000463914 MMP19Q99542 508 aa12.34□□□□□ -0.43
TMEM54-203ENST00000463914 XPNPEP3Q9NQH7 507 aa12.34□□□□□ -0.43
TMEM54-203ENST00000463914 ATP8A2Q9NTI2 1148 aa12.34□□□□□ -0.43
TMEM54-203ENST00000463914 SLC5A4Q9NY91 659 aa12.34□□□□□ -0.43
TMEM54-203ENST00000463914 MYH4Q9Y623 1939 aa12.33□□□□□ -0.44
TMEM54-203ENST00000463914 PGK1P00558 417 aa12.33□□□□□ -0.44
TMEM54-203ENST00000463914 ITGB8P26012 769 aa12.33□□□□□ -0.44
TMEM54-203ENST00000463914 TLE2Q04725 743 aa12.33□□□□□ -0.44
TMEM54-203ENST00000463914 FAM83BQ5T0W9 1011 aa12.33□□□□□ -0.44
TMEM54-203ENST00000463914 RIOX2Q8IUF8 465 aa12.33□□□□□ -0.44
TMEM54-203ENST00000463914 CCDC17Q96LX7 622 aa12.33□□□□□ -0.44
TMEM54-203ENST00000463914 HAUS7Q99871 368 aa12.33□□□□□ -0.44
TMEM54-203ENST00000463914 ZNF214Q9UL59 606 aaPredicted RBP12.33□□□□□ -0.44
TMEM54-203ENST00000463914 PPP1R9AQ9ULJ8 1098 aa12.33□□□□□ -0.44
TMEM54-203ENST00000463914 ADAMTS5Q9UNA0 930 aa12.33□□□□□ -0.44
TMEM54-203ENST00000463914 PHF24Q9UPV7 400 aa12.33□□□□□ -0.44
TMEM54-203ENST00000463914 COG6Q9Y2V7 657 aa12.33□□□□□ -0.44
TMEM54-203ENST00000463914 ZBED9Q6R2W3 1325 aa12.33□□□□□ -0.44
TMEM54-203ENST00000463914 RAD21O60216 631 aa12.32□□□□□ -0.44
TMEM54-203ENST00000463914 HMMRO75330 724 aa12.32□□□□□ -0.44
TMEM54-203ENST00000463914 SLC25A27O95847 323 aa12.32□□□□□ -0.44
TMEM54-203ENST00000463914 RARBP10826 455 aa12.32□□□□□ -0.44
TMEM54-203ENST00000463914 ATP5JP18859 108 aa12.32□□□□□ -0.44
TMEM54-203ENST00000463914 EPHB4P54760 987 aa12.32□□□□□ -0.44
TMEM54-203ENST00000463914 REPS2Q8NFH8 660 aa12.32□□□□□ -0.44
TMEM54-203ENST00000463914 NUP88Q99567 741 aaPredicted RBP12.32□□□□□ -0.44
TMEM54-203ENST00000463914 CDX2Q99626 313 aaPredicted RBP12.32□□□□□ -0.44
TMEM54-203ENST00000463914 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.32□□□□□ -0.44
TMEM54-203ENST00000463914 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.32□□□□□ -0.44
TMEM54-203ENST00000463914 TTYH1Q9H313 450 aaPredicted RBP12.32□□□□□ -0.44
TMEM54-203ENST00000463914 ZBTB40Q9NUA8 1239 aa12.32□□□□□ -0.44
TMEM54-203ENST00000463914 DNAH12Q6ZR08 3092 aa12.31□□□□□ -0.44
TMEM54-203ENST00000463914 VWA5AO00534 786 aa12.31□□□□□ -0.44
TMEM54-203ENST00000463914 PQBP1O60828 265 aaKnown RBP12.31□□□□□ -0.44
TMEM54-203ENST00000463914 ZNF865P0CJ78 1059 aaPredicted RBP12.31□□□□□ -0.44
TMEM54-203ENST00000463914 KCTD2Q14681 263 aa12.31□□□□□ -0.44
TMEM54-203ENST00000463914 ZNF792Q3KQV3 632 aa12.31□□□□□ -0.44
TMEM54-203ENST00000463914 C1orf53Q5VUE5 145 aa12.31□□□□□ -0.44
TMEM54-203ENST00000463914 CTR9Q6PD62 1173 aa12.31□□□□□ -0.44
TMEM54-203ENST00000463914 RPAP2Q8IXW5 612 aaPredicted RBP12.31□□□□□ -0.44
TMEM54-203ENST00000463914 AMOTL1Q8IY63 956 aa12.31□□□□□ -0.44
TMEM54-203ENST00000463914 MIER1Q8N108 512 aa12.31□□□□□ -0.44
TMEM54-203ENST00000463914 STK11IPQ8N1F8 1099 aa12.31□□□□□ -0.44
TMEM54-203ENST00000463914 MAFAQ8NHW3 353 aaPredicted RBP12.31□□□□□ -0.44
TMEM54-203ENST00000463914 MYLIPQ8WY64 445 aa12.31□□□□□ -0.44
TMEM54-203ENST00000463914 TINF2Q9BSI4 451 aa12.31□□□□□ -0.44
TMEM54-203ENST00000463914 PUS7LQ9H0K6 701 aaKnown RBP12.31□□□□□ -0.44
TMEM54-203ENST00000463914 KANSL2Q9H9L4 492 aa12.31□□□□□ -0.44
TMEM54-203ENST00000463914 GOPCQ9HD26 462 aa12.31□□□□□ -0.44
TMEM54-203ENST00000463914 NRBP1Q9UHY1 535 aa12.31□□□□□ -0.44
TMEM54-203ENST00000463914 SLC4A4Q9Y6R1 1079 aa12.31□□□□□ -0.44
TMEM54-203ENST00000463914 A0A1W2PQ45 241 aaPredicted RBP12.3□□□□□ -0.44
TMEM54-203ENST00000463914 A0A1W2PQY0 241 aa12.3□□□□□ -0.44
TMEM54-203ENST00000463914 RAB11FIP3O75154 756 aa12.3□□□□□ -0.44
TMEM54-203ENST00000463914 ADAMTS4O75173 837 aa12.3□□□□□ -0.44
TMEM54-203ENST00000463914 CLTBP09497 229 aa12.3□□□□□ -0.44
TMEM54-203ENST00000463914 STAT3P40763 770 aa12.3□□□□□ -0.44
TMEM54-203ENST00000463914 UBE3CQ15386 1083 aa12.3□□□□□ -0.44
TMEM54-203ENST00000463914 DDRGK1Q96HY6 314 aa12.3□□□□□ -0.44
TMEM54-203ENST00000463914 RNPC3Q96LT9 517 aaKnown RBP12.3□□□□□ -0.44
TMEM54-203ENST00000463914 SEMA6BQ9H3T3 888 aa12.3□□□□□ -0.44
TMEM54-203ENST00000463914 MYADML2A6NDP7 307 aa12.29□□□□□ -0.44
TMEM54-203ENST00000463914 SMARCA5O60264 1052 aaPredicted RBP12.29□□□□□ -0.44
TMEM54-203ENST00000463914 NDUFB10O96000 172 aa12.29□□□□□ -0.44
TMEM54-203ENST00000463914 AKR1A1P14550 325 aa12.29□□□□□ -0.44
TMEM54-203ENST00000463914 RASA1P20936 1047 aa12.29□□□□□ -0.44
TMEM54-203ENST00000463914 IRX5P78411 483 aaPredicted RBP12.29□□□□□ -0.44
TMEM54-203ENST00000463914 SMAD3P84022 425 aaKnown RBP12.29□□□□□ -0.44
TMEM54-203ENST00000463914 RNF180Q86T96 592 aa12.29□□□□□ -0.44
TMEM54-203ENST00000463914 ARPP21Q9UBL0 812 aaPredicted RBP12.29□□□□□ -0.44
TMEM54-203ENST00000463914 DDX19BQ9UMR2 479 aa12.29□□□□□ -0.44
TMEM54-203ENST00000463914 DIS3Q9Y2L1 958 aaKnown RBP12.29□□□□□ -0.44
TMEM54-203ENST00000463914 RIPK3Q9Y572 518 aa12.29□□□□□ -0.44
TMEM54-203ENST00000463914 TACC3Q9Y6A5 838 aa12.29□□□□□ -0.44
TMEM54-203ENST00000463914 SYNRGQ9UMZ2 1314 aa12.29□□□□□ -0.44
TMEM54-203ENST00000463914 KIAA0355O15063 1070 aa12.28□□□□□ -0.44
TMEM54-203ENST00000463914 RAG1P15918 1043 aa12.28□□□□□ -0.44
TMEM54-203ENST00000463914 COPB2P35606 906 aa12.28□□□□□ -0.44
TMEM54-203ENST00000463914 SNRNP48Q6IEG0 339 aaKnown RBP12.28□□□□□ -0.44
TMEM54-203ENST00000463914 SLF1Q9BQI6 1058 aa12.28□□□□□ -0.44
TMEM54-203ENST00000463914 TEX13BQ9BXU2 312 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms