RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 SALL3Q9BXA9 1300 aa22.51■■□□□ 1.19
SF3A1-205ENST00000463818 IGHA2P01877 340 aa22.5■■□□□ 1.19
SF3A1-205ENST00000463818 CNGA1P29973 690 aa22.5■■□□□ 1.19
SF3A1-205ENST00000463818 HDAC1Q13547 482 aaPredicted RBP22.5■■□□□ 1.19
SF3A1-205ENST00000463818 ZNF287Q9HBT7 754 aa22.5■■□□□ 1.19
SF3A1-205ENST00000463818 CLIP2Q9UDT6 1046 aa22.5■■□□□ 1.19
SF3A1-205ENST00000463818 PPP1R9AQ9ULJ8 1098 aa22.5■■□□□ 1.19
SF3A1-205ENST00000463818 ROBO3Q96MS0 1386 aa22.5■■□□□ 1.19
SF3A1-205ENST00000463818 IGKV6D-41A0A0C4DH26 115 aa22.49■■□□□ 1.19
SF3A1-205ENST00000463818 F5H6K3 240 aa22.49■■□□□ 1.19
SF3A1-205ENST00000463818 SLC25A27O95847 323 aa22.49■■□□□ 1.19
SF3A1-205ENST00000463818 KLRC3Q07444 240 aa22.49■■□□□ 1.19
SF3A1-205ENST00000463818 OLFML2BQ68BL8 750 aa22.49■■□□□ 1.19
SF3A1-205ENST00000463818 ABRAQ8N0Z2 381 aa22.49■■□□□ 1.19
SF3A1-205ENST00000463818 PRO3102Q9H379 93 aa22.49■■□□□ 1.19
SF3A1-205ENST00000463818 SLC5A4Q9NY91 659 aa22.49■■□□□ 1.19
SF3A1-205ENST00000463818 PCDH10Q9P2E7 1040 aa22.49■■□□□ 1.19
SF3A1-205ENST00000463818 MYH7P12883 1935 aa22.49■■□□□ 1.19
SF3A1-205ENST00000463818 VWA5AO00534 786 aa22.48■■□□□ 1.19
SF3A1-205ENST00000463818 STAT3P40763 770 aa22.48■■□□□ 1.19
SF3A1-205ENST00000463818 C7orf61Q8IZ16 206 aa22.48■■□□□ 1.19
SF3A1-205ENST00000463818 TRPV1Q8NER1 839 aa22.48■■□□□ 1.19
SF3A1-205ENST00000463818 NUP88Q99567 741 aaPredicted RBP22.48■■□□□ 1.19
SF3A1-205ENST00000463818 NAPBQ9H115 298 aa22.48■■□□□ 1.19
SF3A1-205ENST00000463818 STAP2Q9UGK3 403 aa22.48■■□□□ 1.19
SF3A1-205ENST00000463818 DDX20Q9UHI6 824 aaKnown RBP22.48■■□□□ 1.19
SF3A1-205ENST00000463818 COL6A1P12109 1028 aa22.47■■□□□ 1.19
SF3A1-205ENST00000463818 FCER1AP12319 257 aa22.47■■□□□ 1.19
SF3A1-205ENST00000463818 PDE1AP54750 535 aa22.47■■□□□ 1.19
SF3A1-205ENST00000463818 RIOX2Q8IUF8 465 aa22.47■■□□□ 1.19
SF3A1-205ENST00000463818 PFASO15067 1338 aa22.47■■□□□ 1.19
SF3A1-205ENST00000463818 NDUFB10O96000 172 aa22.46■■□□□ 1.19
SF3A1-205ENST00000463818 SLC3A2P08195 630 aaKnown RBP22.46■■□□□ 1.19
SF3A1-205ENST00000463818 PDE4BQ07343 736 aa22.46■■□□□ 1.19
SF3A1-205ENST00000463818 PPARAQ07869 468 aa22.46■■□□□ 1.19
SF3A1-205ENST00000463818 CCDC129Q6ZRS4 1044 aa22.46■■□□□ 1.19
SF3A1-205ENST00000463818 REPS2Q8NFH8 660 aa22.46■■□□□ 1.19
SF3A1-205ENST00000463818 MKL1Q969V6 931 aa22.46■■□□□ 1.19
SF3A1-205ENST00000463818 EVI5LQ96CN4 794 aa22.46■■□□□ 1.19
SF3A1-205ENST00000463818 CEP95Q96GE4 821 aa22.46■■□□□ 1.19
SF3A1-205ENST00000463818 SLF1Q9BQI6 1058 aa22.46■■□□□ 1.19
SF3A1-205ENST00000463818 MTMR4Q9NYA4 1195 aa22.46■■□□□ 1.19
SF3A1-205ENST00000463818 ZMYND8Q9ULU4 1186 aaPredicted RBP22.46■■□□□ 1.19
SF3A1-205ENST00000463818 RLFQ13129 1914 aa22.45■■□□□ 1.18
SF3A1-205ENST00000463818 TRIOBPQ9H2D6 2365 aa22.45■■□□□ 1.18
SF3A1-205ENST00000463818 MSCO60682 206 aa22.45■■□□□ 1.18
SF3A1-205ENST00000463818 CYBAP13498 195 aa22.45■■□□□ 1.18
SF3A1-205ENST00000463818 FAM47AQ5JRC9 791 aa22.45■■□□□ 1.18
SF3A1-205ENST00000463818 NEDD1Q8NHV4 660 aa22.45■■□□□ 1.18
SF3A1-205ENST00000463818 MMP19Q99542 508 aa22.45■■□□□ 1.18
SF3A1-205ENST00000463818 ZNF214Q9UL59 606 aaPredicted RBP22.45■■□□□ 1.18
SF3A1-205ENST00000463818 TSPY3P0CV98 308 aa22.44■■□□□ 1.18
SF3A1-205ENST00000463818 TSPY8P0CW00 308 aa22.44■■□□□ 1.18
SF3A1-205ENST00000463818 TFAP4Q01664 338 aa22.44■■□□□ 1.18
SF3A1-205ENST00000463818 AAMPQ13685 434 aa22.44■■□□□ 1.18
SF3A1-205ENST00000463818 PRAMEF19Q5SWL8 479 aa22.44■■□□□ 1.18
SF3A1-205ENST00000463818 MAML3Q96JK9 1138 aa22.44■■□□□ 1.18
SF3A1-205ENST00000463818 TTLL1O95922 423 aa22.43■■□□□ 1.18
SF3A1-205ENST00000463818 KCTD2Q14681 263 aa22.43■■□□□ 1.18
SF3A1-205ENST00000463818 PRPF38AQ8NAV1 312 aaKnown RBP22.43■■□□□ 1.18
SF3A1-205ENST00000463818 MYH8P13535 1937 aa22.42■■□□□ 1.18
SF3A1-205ENST00000463818 FOXP2O15409 715 aa22.42■■□□□ 1.18
SF3A1-205ENST00000463818 PGK2P07205 417 aa22.42■■□□□ 1.18
SF3A1-205ENST00000463818 SYN1P17600 705 aa22.42■■□□□ 1.18
SF3A1-205ENST00000463818 COPB2P35606 906 aa22.42■■□□□ 1.18
SF3A1-205ENST00000463818 LRRC26Q2I0M4 334 aa22.42■■□□□ 1.18
SF3A1-205ENST00000463818 SENP6Q9GZR1 1112 aaPredicted RBP22.42■■□□□ 1.18
SF3A1-205ENST00000463818 RWDD1Q9H446 243 aaPredicted RBP22.42■■□□□ 1.18
SF3A1-205ENST00000463818 INCENPQ9NQS7 918 aa22.42■■□□□ 1.18
SF3A1-205ENST00000463818 SYNPO2Q9UMS6 1093 aa22.42■■□□□ 1.18
SF3A1-205ENST00000463818 ZBED4O75132 1171 aa22.41■■□□□ 1.18
SF3A1-205ENST00000463818 CTDSPL2Q05D32 466 aa22.41■■□□□ 1.18
SF3A1-205ENST00000463818 VPS53Q5VIR6 699 aa22.41■■□□□ 1.18
SF3A1-205ENST00000463818 ANO1Q5XXA6 986 aa22.41■■□□□ 1.18
SF3A1-205ENST00000463818 SLFN13Q68D06 897 aa22.41■■□□□ 1.18
SF3A1-205ENST00000463818 LRRC47Q8N1G4 583 aaKnown RBP22.41■■□□□ 1.18
SF3A1-205ENST00000463818 GDF15Q99988 308 aa22.41■■□□□ 1.18
SF3A1-205ENST00000463818 TEX13BQ9BXU2 312 aa22.41■■□□□ 1.18
SF3A1-205ENST00000463818 LNPKQ9C0E8 428 aa22.41■■□□□ 1.18
SF3A1-205ENST00000463818 HELLSQ9NRZ9 838 aa22.41■■□□□ 1.18
SF3A1-205ENST00000463818 FEM1BQ9UK73 627 aa22.41■■□□□ 1.18
SF3A1-205ENST00000463818 SEPT4O43236 478 aa22.4■■□□□ 1.18
SF3A1-205ENST00000463818 ZNF792Q3KQV3 632 aa22.4■■□□□ 1.18
SF3A1-205ENST00000463818 SNRNP48Q6IEG0 339 aaKnown RBP22.4■■□□□ 1.18
SF3A1-205ENST00000463818 B4GALNT3Q6L9W6 998 aa22.4■■□□□ 1.18
SF3A1-205ENST00000463818 GMCL1P1Q8NEA9 526 aa22.4■■□□□ 1.18
SF3A1-205ENST00000463818 KIFC2Q96AC6 838 aa22.4■■□□□ 1.18
SF3A1-205ENST00000463818 DIS3Q9Y2L1 958 aaKnown RBP22.4■■□□□ 1.18
SF3A1-205ENST00000463818 RIPK3Q9Y572 518 aa22.4■■□□□ 1.18
SF3A1-205ENST00000463818 CTDP1Q9Y5B0 961 aaPredicted RBP22.4■■□□□ 1.18
SF3A1-205ENST00000463818 A0A1W2PPC1 479 aa22.39■■□□□ 1.17
SF3A1-205ENST00000463818 SLC4A3P48751 1232 aa22.39■■□□□ 1.17
SF3A1-205ENST00000463818 GJC2Q5T442 439 aaPredicted RBP22.39■■□□□ 1.17
SF3A1-205ENST00000463818 SMC5Q8IY18 1101 aa22.39■■□□□ 1.17
SF3A1-205ENST00000463818 CPXCR1Q8N123 301 aa22.39■■□□□ 1.17
SF3A1-205ENST00000463818 ARRDC4Q8NCT1 418 aa22.39■■□□□ 1.17
SF3A1-205ENST00000463818 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.39■■□□□ 1.17
SF3A1-205ENST00000463818 A0A0G2JMZ2 1700 aa22.39■■□□□ 1.17
SF3A1-205ENST00000463818 DNM1LO00429 736 aa22.38■■□□□ 1.17
SF3A1-205ENST00000463818 ATP2A1O14983 1001 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms