RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 RNF214Q8ND24 703 aa5.25□□□□□ -1.57
SCFD1-204ENST00000463622 DUSP23Q9BVJ7 150 aa5.25□□□□□ -1.57
SCFD1-204ENST00000463622 PICK1Q9NRD5 415 aa5.25□□□□□ -1.57
SCFD1-204ENST00000463622 BTG4Q9NY30 223 aa5.25□□□□□ -1.57
SCFD1-204ENST00000463622 CACNA2D2Q9NY47 1150 aa5.25□□□□□ -1.57
SCFD1-204ENST00000463622 FAM8A1Q9UBU6 413 aa5.25□□□□□ -1.57
SCFD1-204ENST00000463622 TTF2Q9UNY4 1162 aaKnown RBP5.25□□□□□ -1.57
SCFD1-204ENST00000463622 PARD3Q8TEW0 1356 aa5.24□□□□□ -1.57
SCFD1-204ENST00000463622 TECPR2O15040 1411 aa5.24□□□□□ -1.57
SCFD1-204ENST00000463622 IQGAP3Q86VI3 1631 aa5.24□□□□□ -1.57
SCFD1-204ENST00000463622 GIPC1O14908 333 aa5.24□□□□□ -1.57
SCFD1-204ENST00000463622 KCNQ2O43526 872 aa5.24□□□□□ -1.57
SCFD1-204ENST00000463622 TRIM37O94972 964 aa5.24□□□□□ -1.57
SCFD1-204ENST00000463622 NTF4P34130 210 aa5.24□□□□□ -1.57
SCFD1-204ENST00000463622 CD96P40200 585 aa5.24□□□□□ -1.57
SCFD1-204ENST00000463622 CDK8P49336 464 aa5.24□□□□□ -1.57
SCFD1-204ENST00000463622 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-204ENST00000463622 SPRED2Q7Z698 418 aa5.24□□□□□ -1.57
SCFD1-204ENST00000463622 DUSP9Q99956 384 aaKnown RBP5.24□□□□□ -1.57
SCFD1-204ENST00000463622 SPON1Q9HCB6 807 aa5.24□□□□□ -1.57
SCFD1-204ENST00000463622 PAK6Q9NQU5 681 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-204ENST00000463622 STK26Q9P289 416 aa5.24□□□□□ -1.57
SCFD1-204ENST00000463622 PPM1HQ9ULR3 514 aa5.24□□□□□ -1.57
SCFD1-204ENST00000463622 SAMM50Q9Y512 469 aa5.24□□□□□ -1.57
SCFD1-204ENST00000463622 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.23□□□□□ -1.57
SCFD1-204ENST00000463622 TNS3Q68CZ2 1445 aa5.23□□□□□ -1.57
SCFD1-204ENST00000463622 ARHGEF10O15013 1369 aa5.23□□□□□ -1.57
SCFD1-204ENST00000463622 PLEKHH1Q9ULM0 1364 aa5.23□□□□□ -1.57
SCFD1-204ENST00000463622 ADGRF5Q8IZF2 1346 aa5.23□□□□□ -1.57
SCFD1-204ENST00000463622 HNRNPUQ00839 825 aaKnown RBP eCLIP5.23□□□□□ -1.57
SCFD1-204ENST00000463622 NBPF8Q3BBV2 869 aa5.23□□□□□ -1.57
SCFD1-204ENST00000463622 CDC42BPGQ6DT37 1551 aa5.23□□□□□ -1.57
SCFD1-204ENST00000463622 NINLQ9Y2I6 1382 aa5.23□□□□□ -1.57
SCFD1-204ENST00000463622 PDIA4P13667 645 aaKnown RBP5.23□□□□□ -1.57
SCFD1-204ENST00000463622 MAP3K11Q16584 847 aa5.23□□□□□ -1.57
SCFD1-204ENST00000463622 TMEM132EQ6IEE7 984 aa5.23□□□□□ -1.57
SCFD1-204ENST00000463622 BCL7CQ8WUZ0 217 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-204ENST00000463622 MPHOSPH9Q99550 1183 aa5.23□□□□□ -1.57
SCFD1-204ENST00000463622 SPATA31A1Q5TZJ5 1347 aa5.22□□□□□ -1.57
SCFD1-204ENST00000463622 PRAMEF27A3QJZ7 478 aa5.22□□□□□ -1.57
SCFD1-204ENST00000463622 ITIH2P19823 946 aa5.22□□□□□ -1.57
SCFD1-204ENST00000463622 EIF4BP23588 611 aaKnown RBP5.22□□□□□ -1.57
SCFD1-204ENST00000463622 GNA15P30679 374 aa5.22□□□□□ -1.57
SCFD1-204ENST00000463622 LRRC14Q15048 493 aa5.22□□□□□ -1.57
SCFD1-204ENST00000463622 SND1Q7KZF4 910 aaKnown RBP eCLIP5.22□□□□□ -1.57
SCFD1-204ENST00000463622 WFDC3Q8IUB2 231 aa5.22□□□□□ -1.57
SCFD1-204ENST00000463622 ELMO3Q96BJ8 720 aa5.22□□□□□ -1.57
SCFD1-204ENST00000463622 FBXL18Q96ME1 805 aa5.22□□□□□ -1.57
SCFD1-204ENST00000463622 HEXIM2Q96MH2 286 aaKnown RBP5.22□□□□□ -1.57
SCFD1-204ENST00000463622 SIN3AQ96ST3 1273 aa5.22□□□□□ -1.57
SCFD1-204ENST00000463622 SLC5A6Q9Y289 635 aa5.22□□□□□ -1.57
SCFD1-204ENST00000463622 C1QTNF8P60827 252 aa5.21□□□□□ -1.57
SCFD1-204ENST00000463622 RING1Q06587 406 aa5.21□□□□□ -1.57
SCFD1-204ENST00000463622 EAPPQ56P03 285 aaPredicted RBP5.21□□□□□ -1.57
SCFD1-204ENST00000463622 ZBTB37Q5TC79 503 aa5.21□□□□□ -1.57
SCFD1-204ENST00000463622 MEI1Q5TIA1 1274 aa5.21□□□□□ -1.57
SCFD1-204ENST00000463622 LRFN4Q6PJG9 635 aa5.21□□□□□ -1.57
SCFD1-204ENST00000463622 ARHGAP27Q6ZUM4 889 aa5.21□□□□□ -1.57
SCFD1-204ENST00000463622 NETO1Q8TDF5 533 aa5.21□□□□□ -1.57
SCFD1-204ENST00000463622 FAM161BQ96MY7 647 aa5.21□□□□□ -1.57
SCFD1-204ENST00000463622 C14orf93Q9H972 538 aaKnown RBP5.21□□□□□ -1.57
SCFD1-204ENST00000463622 CYP8B1Q9UNU6 501 aa5.21□□□□□ -1.57
SCFD1-204ENST00000463622 PLAGL2Q9UPG8 496 aa5.21□□□□□ -1.57
SCFD1-204ENST00000463622 PCDHB5Q9Y5E4 795 aa5.21□□□□□ -1.57
SCFD1-204ENST00000463622 USP32Q8NFA0 1604 aa5.21□□□□□ -1.58
SCFD1-204ENST00000463622 BRWD3Q6RI45 1802 aa5.21□□□□□ -1.58
SCFD1-204ENST00000463622 PAX4O43316 350 aa5.21□□□□□ -1.58
SCFD1-204ENST00000463622 PRPF40AO75400 957 aaKnown RBP5.21□□□□□ -1.58
SCFD1-204ENST00000463622 CCDC85BQ15834 202 aaPredicted RBP5.21□□□□□ -1.58
SCFD1-204ENST00000463622 TTBK2Q6IQ55 1244 aa5.21□□□□□ -1.58
SCFD1-204ENST00000463622 PLPPR2Q96GM1 343 aa5.21□□□□□ -1.58
SCFD1-204ENST00000463622 PPP1R1BQ9UD71 204 aaPredicted RBP5.21□□□□□ -1.58
SCFD1-204ENST00000463622 AK5Q9Y6K8 562 aa5.21□□□□□ -1.58
SCFD1-204ENST00000463622 NRXN1Q9ULB1 1477 aa5.2□□□□□ -1.58
SCFD1-204ENST00000463622 PATL2C9JE40 543 aaKnown RBP5.2□□□□□ -1.58
SCFD1-204ENST00000463622 PLSCR1O15162 318 aa5.2□□□□□ -1.58
SCFD1-204ENST00000463622 CD8BP10966 210 aa5.2□□□□□ -1.58
SCFD1-204ENST00000463622 OXCT1P55809 520 aa5.2□□□□□ -1.58
SCFD1-204ENST00000463622 TAGLNQ01995 201 aaKnown RBP5.2□□□□□ -1.58
SCFD1-204ENST00000463622 SEPT6Q14141 434 aa5.2□□□□□ -1.58
SCFD1-204ENST00000463622 PLCL1Q15111 1095 aa5.2□□□□□ -1.58
SCFD1-204ENST00000463622 CDC37L1Q7L3B6 337 aa5.2□□□□□ -1.58
SCFD1-204ENST00000463622 GAL3ST3Q96A11 431 aa5.2□□□□□ -1.58
SCFD1-204ENST00000463622 FBRSQ9HAH7 460 aa5.2□□□□□ -1.58
SCFD1-204ENST00000463622 PRDM10Q9NQV6 1147 aa5.2□□□□□ -1.58
SCFD1-204ENST00000463622 RNF114Q9Y508 228 aa5.2□□□□□ -1.58
SCFD1-204ENST00000463622 MARF1Q9Y4F3 1742 aaKnown RBP5.2□□□□□ -1.58
SCFD1-204ENST00000463622 ANKRD30BQ9BXX2 1392 aa5.2□□□□□ -1.58
SCFD1-204ENST00000463622 AOC3Q16853 763 aa5.19□□□□□ -1.58
SCFD1-204ENST00000463622 SV2BQ7L1I2 683 aa5.19□□□□□ -1.58
SCFD1-204ENST00000463622 FAM214BQ7L5A3 538 aa5.19□□□□□ -1.58
SCFD1-204ENST00000463622 PMFBP1Q8TBY8 1022 aa5.19□□□□□ -1.58
SCFD1-204ENST00000463622 ANKRD24Q8TF21 1146 aa5.19□□□□□ -1.58
SCFD1-204ENST00000463622 KRTAP4-12Q9BQ66 201 aa5.19□□□□□ -1.58
SCFD1-204ENST00000463622 PARP2Q9UGN5 583 aa5.19□□□□□ -1.58
SCFD1-204ENST00000463622 CLTCL1P53675 1640 aa5.19□□□□□ -1.58
SCFD1-204ENST00000463622 F6X3S4 739 aa5.19□□□□□ -1.58
SCFD1-204ENST00000463622 FANCGO15287 622 aa5.19□□□□□ -1.58
SCFD1-204ENST00000463622 NKG7Q16617 165 aa5.19□□□□□ -1.58
SCFD1-204ENST00000463622 RGL3Q3MIN7 710 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms