RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 SHISA4Q96DD7 197 aa21.93■■□□□ 1.1
CCDC78-206ENST00000463539 PHF20Q9BVI0 1012 aa21.93■■□□□ 1.1
CCDC78-206ENST00000463539 SYNPO2Q9UMS6 1093 aa21.93■■□□□ 1.1
CCDC78-206ENST00000463539 ELP1O95163 1332 aa21.93■■□□□ 1.1
CCDC78-206ENST00000463539 MBD3O95983 291 aa21.92■■□□□ 1.1
CCDC78-206ENST00000463539 GMCL1P1Q8NEA9 526 aa21.92■■□□□ 1.1
CCDC78-206ENST00000463539 DCAF4Q8WV16 495 aa21.92■■□□□ 1.1
CCDC78-206ENST00000463539 RRP36Q96EU6 259 aaKnown RBP21.92■■□□□ 1.1
CCDC78-206ENST00000463539 FOXP1Q9H334 677 aaPredicted RBP21.92■■□□□ 1.1
CCDC78-206ENST00000463539 ARHGEF10LQ9HCE6 1279 aa21.92■■□□□ 1.1
CCDC78-206ENST00000463539 GPCPD1Q9NPB8 672 aa21.92■■□□□ 1.1
CCDC78-206ENST00000463539 BTBD18B2RXH4 712 aa21.92■■□□□ 1.1
CCDC78-206ENST00000463539 SLC1A4P43007 532 aa21.92■■□□□ 1.1
CCDC78-206ENST00000463539 SLFN13Q68D06 897 aa21.92■■□□□ 1.1
CCDC78-206ENST00000463539 NOSTRINQ8IVI9 506 aa21.92■■□□□ 1.1
CCDC78-206ENST00000463539 LEO1Q8WVC0 666 aaPredicted RBP21.92■■□□□ 1.1
CCDC78-206ENST00000463539 HOOK2Q96ED9 719 aa21.92■■□□□ 1.1
CCDC78-206ENST00000463539 USP28Q96RU2 1077 aa21.92■■□□□ 1.1
CCDC78-206ENST00000463539 UBA5Q9GZZ9 404 aa21.92■■□□□ 1.1
CCDC78-206ENST00000463539 BRMS1Q9HCU9 246 aa21.92■■□□□ 1.1
CCDC78-206ENST00000463539 SEC63Q9UGP8 760 aaKnown RBP21.92■■□□□ 1.1
CCDC78-206ENST00000463539 ISY1Q9ULR0 285 aaKnown RBP21.92■■□□□ 1.1
CCDC78-206ENST00000463539 ZC3H4Q9UPT8 1303 aaKnown RBP21.91■■□□□ 1.1
CCDC78-206ENST00000463539 GADD45BO75293 160 aaPredicted RBP21.91■■□□□ 1.1
CCDC78-206ENST00000463539 UBE2HP62256 183 aa21.91■■□□□ 1.1
CCDC78-206ENST00000463539 CEBPZQ03701 1054 aaKnown RBP21.91■■□□□ 1.1
CCDC78-206ENST00000463539 NBPF12Q5TAG4 269 aaPredicted RBP21.91■■□□□ 1.1
CCDC78-206ENST00000463539 GPT2Q8TD30 523 aa21.91■■□□□ 1.1
CCDC78-206ENST00000463539 RIOX1Q9H6W3 641 aa21.91■■□□□ 1.1
CCDC78-206ENST00000463539 SH3GLB2Q9NR46 395 aa21.91■■□□□ 1.1
CCDC78-206ENST00000463539 PPP2R3BQ9Y5P8 575 aa21.91■■□□□ 1.1
CCDC78-206ENST00000463539 PHF20L1A8MW92 1017 aa21.9■■□□□ 1.1
CCDC78-206ENST00000463539 F5H6K3 240 aa21.9■■□□□ 1.1
CCDC78-206ENST00000463539 ASNSP08243 561 aa21.9■■□□□ 1.1
CCDC78-206ENST00000463539 VEGFAP15692 232 aaPredicted RBP21.9■■□□□ 1.1
CCDC78-206ENST00000463539 KRT2P35908 639 aa21.9■■□□□ 1.1
CCDC78-206ENST00000463539 KLRC3Q07444 240 aa21.9■■□□□ 1.1
CCDC78-206ENST00000463539 DCAF15Q66K64 600 aa21.9■■□□□ 1.1
CCDC78-206ENST00000463539 KCTD1Q719H9 257 aa21.9■■□□□ 1.1
CCDC78-206ENST00000463539 HEATR3Q7Z4Q2 680 aa21.9■■□□□ 1.1
CCDC78-206ENST00000463539 HOMER1Q86YM7 354 aa21.9■■□□□ 1.1
CCDC78-206ENST00000463539 GPKOWQ92917 476 aaPredicted RBP eCLIP21.9■■□□□ 1.1
CCDC78-206ENST00000463539 FTOQ9C0B1 505 aaKnown RBP eCLIP21.9■■□□□ 1.1
CCDC78-206ENST00000463539 PITPNM2Q9BZ72 1349 aa21.9■■□□□ 1.1
CCDC78-206ENST00000463539 A0A1W2PRG0 241 aa21.9■■□□□ 1.1
CCDC78-206ENST00000463539 GMCL1Q96IK5 515 aa21.9■■□□□ 1.1
CCDC78-206ENST00000463539 VAT1LQ9HCJ6 419 aa21.9■■□□□ 1.1
CCDC78-206ENST00000463539 NDUFB10O96000 172 aa21.89■■□□□ 1.09
CCDC78-206ENST00000463539 NLRP5P59047 1200 aa21.89■■□□□ 1.09
CCDC78-206ENST00000463539 WWC2Q6AWC2 1192 aa21.89■■□□□ 1.09
CCDC78-206ENST00000463539 OXER1Q8TDS5 423 aa21.89■■□□□ 1.09
CCDC78-206ENST00000463539 L3MBTL3Q96JM7 780 aaPredicted RBP21.89■■□□□ 1.09
CCDC78-206ENST00000463539 PIGSQ96S52 555 aa21.89■■□□□ 1.09
CCDC78-206ENST00000463539 NR5A1Q13285 461 aa21.88■■□□□ 1.09
CCDC78-206ENST00000463539 CCDC148Q8NFR7 591 aa21.88■■□□□ 1.09
CCDC78-206ENST00000463539 SH2D4AQ9H788 454 aa21.88■■□□□ 1.09
CCDC78-206ENST00000463539 BARHL2Q9NY43 387 aa21.88■■□□□ 1.09
CCDC78-206ENST00000463539 RTEL1Q9NZ71 1219 aa21.88■■□□□ 1.09
CCDC78-206ENST00000463539 TMX2Q9Y320 296 aa21.88■■□□□ 1.09
CCDC78-206ENST00000463539 CALML3P27482 149 aa21.87■■□□□ 1.09
CCDC78-206ENST00000463539 ECE1P42892 770 aa21.87■■□□□ 1.09
CCDC78-206ENST00000463539 TTBK2Q6IQ55 1244 aa21.87■■□□□ 1.09
CCDC78-206ENST00000463539 FAM177A1Q8N128 213 aaPredicted RBP21.87■■□□□ 1.09
CCDC78-206ENST00000463539 ACER1Q8TDN7 264 aa21.87■■□□□ 1.09
CCDC78-206ENST00000463539 ZNF341Q9BYN7 854 aa21.87■■□□□ 1.09
CCDC78-206ENST00000463539 GZF1Q9H116 711 aaPredicted RBP21.87■■□□□ 1.09
CCDC78-206ENST00000463539 GOPCQ9HD26 462 aa21.87■■□□□ 1.09
CCDC78-206ENST00000463539 GINM1Q9NU53 330 aa21.87■■□□□ 1.09
CCDC78-206ENST00000463539 POLR3EQ9NVU0 708 aa21.87■■□□□ 1.09
CCDC78-206ENST00000463539 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.87■■□□□ 1.09
CCDC78-206ENST00000463539 RCOR1Q9UKL0 485 aa21.87■■□□□ 1.09
CCDC78-206ENST00000463539 MYH4Q9Y623 1939 aa21.87■■□□□ 1.09
CCDC78-206ENST00000463539 STXBP3O00186 592 aa21.87■■□□□ 1.09
CCDC78-206ENST00000463539 CTNND1O60716 968 aaKnown RBP21.87■■□□□ 1.09
CCDC78-206ENST00000463539 PRAMEF18Q5VWM3 479 aa21.87■■□□□ 1.09
CCDC78-206ENST00000463539 ADGRF4Q8IZF3 695 aa21.87■■□□□ 1.09
CCDC78-206ENST00000463539 GOLGA6L4A6NEF3 574 aa21.86■■□□□ 1.09
CCDC78-206ENST00000463539 SLC16A2P36021 539 aa21.86■■□□□ 1.09
CCDC78-206ENST00000463539 NPY5RQ15761 445 aa21.86■■□□□ 1.09
CCDC78-206ENST00000463539 TPRNQ4KMQ1 711 aa21.86■■□□□ 1.09
CCDC78-206ENST00000463539 CCDC12Q8WUD4 166 aaPredicted RBP21.86■■□□□ 1.09
CCDC78-206ENST00000463539 JMJD4Q9H9V9 463 aa21.86■■□□□ 1.09
CCDC78-206ENST00000463539 MYH6P13533 1939 aa21.86■■□□□ 1.09
CCDC78-206ENST00000463539 hCG_1984214I3L0E3 225 aa21.85■■□□□ 1.09
CCDC78-206ENST00000463539 NASPP49321 788 aaPredicted RBP21.85■■□□□ 1.09
CCDC78-206ENST00000463539 ANO1Q5XXA6 986 aa21.85■■□□□ 1.09
CCDC78-206ENST00000463539 TYW1BQ6NUM6 668 aa21.85■■□□□ 1.09
CCDC78-206ENST00000463539 ZNF713Q8N859 430 aaPredicted RBP21.85■■□□□ 1.09
CCDC78-206ENST00000463539 DCPSQ96C86 337 aaKnown RBP21.85■■□□□ 1.09
CCDC78-206ENST00000463539 CLIC4Q9Y696 253 aa21.85■■□□□ 1.09
CCDC78-206ENST00000463539 GLTPD2A6NH11 291 aa21.85■■□□□ 1.09
CCDC78-206ENST00000463539 YEATS4O95619 227 aa21.85■■□□□ 1.09
CCDC78-206ENST00000463539 BMP3P12645 472 aa21.85■■□□□ 1.09
CCDC78-206ENST00000463539 NAPAP54920 295 aa21.85■■□□□ 1.09
CCDC78-206ENST00000463539 STK38Q15208 465 aa21.85■■□□□ 1.09
CCDC78-206ENST00000463539 RILPL1Q5EBL4 403 aa21.85■■□□□ 1.09
CCDC78-206ENST00000463539 CAVIN1Q6NZI2 390 aaKnown RBP21.85■■□□□ 1.09
CCDC78-206ENST00000463539 SPICE1Q8N0Z3 855 aa21.85■■□□□ 1.09
CCDC78-206ENST00000463539 NUP88Q99567 741 aaPredicted RBP21.85■■□□□ 1.09
CCDC78-206ENST00000463539 TCHHQ07283 1943 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms