RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 KRBA2Q6ZNG9 492 aa14.68□□□□□ -0.06
VAPB-203ENST00000463370 HOMER1Q86YM7 354 aa14.68□□□□□ -0.06
VAPB-203ENST00000463370 SPC24Q8NBT2 197 aa14.68□□□□□ -0.06
VAPB-203ENST00000463370 M0R2N6 131 aa14.67□□□□□ -0.06
VAPB-203ENST00000463370 POLR2DO15514 142 aaKnown RBP14.67□□□□□ -0.06
VAPB-203ENST00000463370 PDHBP11177 359 aa14.67□□□□□ -0.06
VAPB-203ENST00000463370 DPEP1P16444 411 aa14.67□□□□□ -0.06
VAPB-203ENST00000463370 FKBP1AP62942 108 aaKnown RBP14.67□□□□□ -0.06
VAPB-203ENST00000463370 BLIDQ8IZY5 108 aa14.67□□□□□ -0.06
VAPB-203ENST00000463370 PDILTQ8N807 584 aa14.67□□□□□ -0.06
VAPB-203ENST00000463370 EPSTI1Q96J88 318 aa14.67□□□□□ -0.06
VAPB-203ENST00000463370 VAT1LQ9HCJ6 419 aa14.67□□□□□ -0.06
VAPB-203ENST00000463370 BARHL2Q9NY43 387 aa14.67□□□□□ -0.06
VAPB-203ENST00000463370 PCDHA4Q9UN74 947 aa14.67□□□□□ -0.06
VAPB-203ENST00000463370 CEP131Q9UPN4 1083 aa14.67□□□□□ -0.06
VAPB-203ENST00000463370 ZKSCAN5Q9Y2L8 839 aa14.67□□□□□ -0.06
VAPB-203ENST00000463370 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.67□□□□□ -0.06
VAPB-203ENST00000463370 A0A087X0B3 334 aa14.67□□□□□ -0.06
VAPB-203ENST00000463370 SF3B2Q13435 895 aaKnown RBP14.67□□□□□ -0.06
VAPB-203ENST00000463370 GRAMD1CQ8IYS0 662 aa14.67□□□□□ -0.06
VAPB-203ENST00000463370 AOPEPQ8N6M6 819 aa14.67□□□□□ -0.06
VAPB-203ENST00000463370 CNNM3Q8NE01 707 aa14.67□□□□□ -0.06
VAPB-203ENST00000463370 SPZ1Q9BXG8 430 aa14.67□□□□□ -0.06
VAPB-203ENST00000463370 CLIP2Q9UDT6 1046 aa14.67□□□□□ -0.06
VAPB-203ENST00000463370 CAVIN2O95810 425 aa14.66□□□□□ -0.06
VAPB-203ENST00000463370 MDM2Q00987 491 aaPredicted RBP14.66□□□□□ -0.06
VAPB-203ENST00000463370 PTGDRQ13258 359 aa14.66□□□□□ -0.06
VAPB-203ENST00000463370 CEP57L1Q8IYX8 460 aa14.66□□□□□ -0.06
VAPB-203ENST00000463370 TTLL6Q8N841 843 aa14.66□□□□□ -0.06
VAPB-203ENST00000463370 ZNF579Q8NAF0 562 aaKnown RBP14.66□□□□□ -0.06
VAPB-203ENST00000463370 PIGSQ96S52 555 aa14.66□□□□□ -0.06
VAPB-203ENST00000463370 MRIQ9BWK5 157 aa14.66□□□□□ -0.06
VAPB-203ENST00000463370 TDRD3Q9H7E2 651 aaKnown RBP14.66□□□□□ -0.06
VAPB-203ENST00000463370 TTC12Q9H892 705 aaPredicted RBP14.66□□□□□ -0.06
VAPB-203ENST00000463370 SH3GLB2Q9NR46 395 aa14.66□□□□□ -0.06
VAPB-203ENST00000463370 TUBE1Q9UJT0 475 aa14.66□□□□□ -0.06
VAPB-203ENST00000463370 ZNF646O15015 1829 aaPredicted RBP14.66□□□□□ -0.06
VAPB-203ENST00000463370 MPHOSPH10O00566 681 aaKnown RBP14.66□□□□□ -0.06
VAPB-203ENST00000463370 MCM7P33993 719 aa14.66□□□□□ -0.06
VAPB-203ENST00000463370 IL17AQ16552 155 aa14.66□□□□□ -0.06
VAPB-203ENST00000463370 PLA2G4DQ86XP0 818 aa14.66□□□□□ -0.06
VAPB-203ENST00000463370 ZNF277Q9NRM2 450 aaPredicted RBP14.66□□□□□ -0.06
VAPB-203ENST00000463370 SWAP70Q9UH65 585 aa14.66□□□□□ -0.06
VAPB-203ENST00000463370 SERTAD1Q9UHV2 236 aa14.66□□□□□ -0.06
VAPB-203ENST00000463370 SERPINA10Q9UK55 444 aa14.66□□□□□ -0.06
VAPB-203ENST00000463370 PCDHA6Q9UN73 950 aa14.66□□□□□ -0.06
VAPB-203ENST00000463370 PCDHA8Q9Y5H6 950 aa14.66□□□□□ -0.06
VAPB-203ENST00000463370 COL4A5P29400 1685 aa14.65□□□□□ -0.06
VAPB-203ENST00000463370 HLA-DOAP06340 250 aa14.65□□□□□ -0.06
VAPB-203ENST00000463370 PRR29P0C7W0 189 aa14.65□□□□□ -0.06
VAPB-203ENST00000463370 MSNP26038 577 aaKnown RBP14.65□□□□□ -0.06
VAPB-203ENST00000463370 CALML3P27482 149 aa14.65□□□□□ -0.06
VAPB-203ENST00000463370 ZNF75DP51815 510 aa14.65□□□□□ -0.06
VAPB-203ENST00000463370 NLRP12P59046 1061 aa14.65□□□□□ -0.06
VAPB-203ENST00000463370 PRMT6Q96LA8 375 aaPredicted RBP14.65□□□□□ -0.06
VAPB-203ENST00000463370 LZTS2Q9BRK4 669 aa14.65□□□□□ -0.06
VAPB-203ENST00000463370 IDI2Q9BXS1 227 aa14.65□□□□□ -0.06
VAPB-203ENST00000463370 FAM13BQ9NYF5 915 aa14.65□□□□□ -0.06
VAPB-203ENST00000463370 VWA3AA6NCI4 1184 aa14.65□□□□□ -0.07
VAPB-203ENST00000463370 RAD17O75943 681 aa14.65□□□□□ -0.07
VAPB-203ENST00000463370 ATP2C1P98194 919 aaPredicted RBP14.65□□□□□ -0.07
VAPB-203ENST00000463370 HDLBPQ00341 1268 aaKnown RBP14.65□□□□□ -0.07
VAPB-203ENST00000463370 CFAP100Q494V2 611 aa14.65□□□□□ -0.07
VAPB-203ENST00000463370 CC2D2BQ6DHV5 1058 aa14.65□□□□□ -0.07
VAPB-203ENST00000463370 SYMPKQ92797 1274 aaKnown RBP14.65□□□□□ -0.07
VAPB-203ENST00000463370 TRIM5Q9C035 493 aa14.65□□□□□ -0.07
VAPB-203ENST00000463370 PCDHA5Q9Y5H7 936 aa14.65□□□□□ -0.07
VAPB-203ENST00000463370 BECN2A8MW95 431 aa14.64□□□□□ -0.07
VAPB-203ENST00000463370 GOLGA6L19H0YKK7 550 aa14.64□□□□□ -0.07
VAPB-203ENST00000463370 ACTN4O43707 911 aaKnown RBP14.64□□□□□ -0.07
VAPB-203ENST00000463370 TTLL1O95922 423 aa14.64□□□□□ -0.07
VAPB-203ENST00000463370 SNHG28P0DPA3 235 aa14.64□□□□□ -0.07
VAPB-203ENST00000463370 BMP6P22004 513 aa14.64□□□□□ -0.07
VAPB-203ENST00000463370 ATP2B2Q01814 1243 aa14.64□□□□□ -0.07
VAPB-203ENST00000463370 EHD4Q9H223 541 aa14.64□□□□□ -0.07
VAPB-203ENST00000463370 GPCPD1Q9NPB8 672 aa14.64□□□□□ -0.07
VAPB-203ENST00000463370 MORC2Q9Y6X9 1032 aaPredicted RBP14.64□□□□□ -0.07
VAPB-203ENST00000463370 CCDC93Q567U6 631 aa14.63□□□□□ -0.07
VAPB-203ENST00000463370 ZSCAN29Q8IWY8 852 aaPredicted RBP14.63□□□□□ -0.07
VAPB-203ENST00000463370 C4orf32Q8N8J7 132 aa14.63□□□□□ -0.07
VAPB-203ENST00000463370 SUPT20HQ8NEM7 779 aa14.63□□□□□ -0.07
VAPB-203ENST00000463370 ZBTB7AO95365 584 aa14.63□□□□□ -0.07
VAPB-203ENST00000463370 TRAPPC10P48553 1259 aa14.63□□□□□ -0.07
VAPB-203ENST00000463370 NAPAP54920 295 aa14.63□□□□□ -0.07
VAPB-203ENST00000463370 ZRSR1Q15695 479 aaKnown RBP14.63□□□□□ -0.07
VAPB-203ENST00000463370 INF2Q27J81 1249 aa14.63□□□□□ -0.07
VAPB-203ENST00000463370 TTBK2Q6IQ55 1244 aa14.63□□□□□ -0.07
VAPB-203ENST00000463370 DAGLBQ8NCG7 672 aa14.63□□□□□ -0.07
VAPB-203ENST00000463370 RRP36Q96EU6 259 aaKnown RBP14.63□□□□□ -0.07
VAPB-203ENST00000463370 RIOX1Q9H6W3 641 aa14.63□□□□□ -0.07
VAPB-203ENST00000463370 NRBP1Q9UHY1 535 aa14.63□□□□□ -0.07
VAPB-203ENST00000463370 ZBTB12Q9Y330 459 aaPredicted RBP14.63□□□□□ -0.07
VAPB-203ENST00000463370 MYO3BQ8WXR4 1341 aa14.62□□□□□ -0.07
VAPB-203ENST00000463370 CCDC148Q8NFR7 591 aa14.62□□□□□ -0.07
VAPB-203ENST00000463370 ZMYND12Q9H0C1 365 aa14.62□□□□□ -0.07
VAPB-203ENST00000463370 KCNF1Q9H3M0 494 aa14.62□□□□□ -0.07
VAPB-203ENST00000463370 PSMD14O00487 310 aa14.62□□□□□ -0.07
VAPB-203ENST00000463370 JAG1P78504 1218 aa14.62□□□□□ -0.07
VAPB-203ENST00000463370 NCAPHQ15003 741 aa14.62□□□□□ -0.07
VAPB-203ENST00000463370 POSTNQ15063 836 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms