RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 STK3Q13188 491 aa9.86□□□□□ -0.83
SHQ1-203ENST00000463369 MSL1Q68DK7 614 aa9.86□□□□□ -0.83
SHQ1-203ENST00000463369 LRRC31Q6UY01 552 aa9.86□□□□□ -0.83
SHQ1-203ENST00000463369 C3orf67Q6ZVT6 689 aa9.86□□□□□ -0.83
SHQ1-203ENST00000463369 HDXQ7Z353 690 aa9.86□□□□□ -0.83
SHQ1-203ENST00000463369 EFCAB13Q8IY85 973 aa9.86□□□□□ -0.83
SHQ1-203ENST00000463369 CCDC24Q8N4L8 307 aa9.86□□□□□ -0.83
SHQ1-203ENST00000463369 ZNF594Q96JF6 807 aaPredicted RBP9.86□□□□□ -0.83
SHQ1-203ENST00000463369 CXorf56Q9H5V9 222 aa9.86□□□□□ -0.83
SHQ1-203ENST00000463369 COL4A1P02462 1669 aa9.86□□□□□ -0.83
SHQ1-203ENST00000463369 CIAO1O76071 339 aa9.86□□□□□ -0.83
SHQ1-203ENST00000463369 SASH1O94885 1247 aa9.86□□□□□ -0.83
SHQ1-203ENST00000463369 OSBPP22059 807 aa9.86□□□□□ -0.83
SHQ1-203ENST00000463369 CALRP27797 417 aaKnown RBP9.86□□□□□ -0.83
SHQ1-203ENST00000463369 BEND6Q5SZJ8 279 aaPredicted RBP9.86□□□□□ -0.83
SHQ1-203ENST00000463369 FSIP1Q8NA03 581 aa9.86□□□□□ -0.83
SHQ1-203ENST00000463369 PRR7Q8TB68 274 aa9.86□□□□□ -0.83
SHQ1-203ENST00000463369 ERCC4Q92889 916 aaPredicted RBP9.86□□□□□ -0.83
SHQ1-203ENST00000463369 TCEANC2Q96MN5 208 aa9.86□□□□□ -0.83
SHQ1-203ENST00000463369 WDR24Q96S15 920 aa9.86□□□□□ -0.83
SHQ1-203ENST00000463369 SIL1Q9H173 461 aa9.86□□□□□ -0.83
SHQ1-203ENST00000463369 KIAA1468Q9P260 1216 aa9.86□□□□□ -0.83
SHQ1-203ENST00000463369 TPX2Q9ULW0 747 aaKnown RBP9.86□□□□□ -0.83
SHQ1-203ENST00000463369 PCDHB8Q9UN66 801 aa9.86□□□□□ -0.83
SHQ1-203ENST00000463369 PCDHB13Q9Y5F0 798 aa9.86□□□□□ -0.83
SHQ1-203ENST00000463369 ARAP2Q8WZ64 1704 aa9.86□□□□□ -0.83
SHQ1-203ENST00000463369 GOLGA6L9A6NEM1 432 aa9.85□□□□□ -0.83
SHQ1-203ENST00000463369 EYA2O00167 538 aa9.85□□□□□ -0.83
SHQ1-203ENST00000463369 USP5P45974 858 aa9.85□□□□□ -0.83
SHQ1-203ENST00000463369 MNX1P50219 401 aaPredicted RBP9.85□□□□□ -0.83
SHQ1-203ENST00000463369 GNG11P61952 73 aa9.85□□□□□ -0.83
SHQ1-203ENST00000463369 FANCCQ00597 558 aa9.85□□□□□ -0.83
SHQ1-203ENST00000463369 NCAPHQ15003 741 aa9.85□□□□□ -0.83
SHQ1-203ENST00000463369 DPCR1Q3MIW9 517 aa9.85□□□□□ -0.83
SHQ1-203ENST00000463369 ATL3Q6DD88 541 aa9.85□□□□□ -0.83
SHQ1-203ENST00000463369 ATG9AQ7Z3C6 839 aa9.85□□□□□ -0.83
SHQ1-203ENST00000463369 FMR1NBQ8N0W7 255 aaPredicted RBP9.85□□□□□ -0.83
SHQ1-203ENST00000463369 ARMC5Q96C12 935 aa9.85□□□□□ -0.83
SHQ1-203ENST00000463369 SDF4Q9BRK5 362 aa9.85□□□□□ -0.83
SHQ1-203ENST00000463369 DONSONQ9NYP3 566 aa9.85□□□□□ -0.83
SHQ1-203ENST00000463369 PPP2R2CQ9Y2T4 447 aa9.85□□□□□ -0.83
SHQ1-203ENST00000463369 A0A087WUV0 522 aaPredicted RBP9.84□□□□□ -0.83
SHQ1-203ENST00000463369 KLRG2A4D1S0 409 aaPredicted RBP9.84□□□□□ -0.83
SHQ1-203ENST00000463369 IL15P40933 162 aaPredicted RBP9.84□□□□□ -0.83
SHQ1-203ENST00000463369 AMPD3Q01432 767 aa9.84□□□□□ -0.83
SHQ1-203ENST00000463369 ZRSR1Q15695 479 aaKnown RBP9.84□□□□□ -0.83
SHQ1-203ENST00000463369 PPP1R15BQ5SWA1 713 aa9.84□□□□□ -0.83
SHQ1-203ENST00000463369 ARMCX6Q7L4S7 300 aa9.84□□□□□ -0.83
SHQ1-203ENST00000463369 SEC31BQ9NQW1 1179 aa9.84□□□□□ -0.83
SHQ1-203ENST00000463369 L1RE1Q9UN81 338 aa9.84□□□□□ -0.83
SHQ1-203ENST00000463369 AKAP2Q9Y2D5 859 aa9.84□□□□□ -0.83
SHQ1-203ENST00000463369 MYH13Q9UKX3 1938 aa9.84□□□□□ -0.83
SHQ1-203ENST00000463369 MYH15Q9Y2K3 1946 aa9.84□□□□□ -0.83
SHQ1-203ENST00000463369 ARHGAP6O43182 974 aa9.84□□□□□ -0.83
SHQ1-203ENST00000463369 N4BP1O75113 896 aaKnown RBP9.84□□□□□ -0.83
SHQ1-203ENST00000463369 UBE4AQ14139 1066 aa9.84□□□□□ -0.83
SHQ1-203ENST00000463369 R3HDM1Q15032 1099 aaKnown RBP9.84□□□□□ -0.83
SHQ1-203ENST00000463369 CRY2Q49AN0 593 aa9.84□□□□□ -0.83
SHQ1-203ENST00000463369 LRRC24Q50LG9 513 aa9.84□□□□□ -0.83
SHQ1-203ENST00000463369 LDHAL6AQ6ZMR3 332 aa9.84□□□□□ -0.83
SHQ1-203ENST00000463369 TADA2BQ86TJ2 420 aa9.84□□□□□ -0.83
SHQ1-203ENST00000463369 NLRP7Q8WX94 980 aa9.84□□□□□ -0.83
SHQ1-203ENST00000463369 KIFC2Q96AC6 838 aa9.84□□□□□ -0.83
SHQ1-203ENST00000463369 ZNF396Q96N95 335 aaPredicted RBP9.84□□□□□ -0.83
SHQ1-203ENST00000463369 USP28Q96RU2 1077 aa9.84□□□□□ -0.83
SHQ1-203ENST00000463369 CDC5LQ99459 802 aaKnown RBP9.84□□□□□ -0.83
SHQ1-203ENST00000463369 BRIP1Q9BX63 1249 aa9.84□□□□□ -0.83
SHQ1-203ENST00000463369 PUS3Q9BZE2 481 aaKnown RBP9.84□□□□□ -0.83
SHQ1-203ENST00000463369 INO80BQ9C086 356 aaPredicted RBP9.84□□□□□ -0.83
SHQ1-203ENST00000463369 FTOQ9C0B1 505 aaKnown RBP eCLIP9.84□□□□□ -0.83
SHQ1-203ENST00000463369 FAM217BQ9NTX9 383 aaPredicted RBP9.84□□□□□ -0.83
SHQ1-203ENST00000463369 RAB21Q9UL25 225 aa9.84□□□□□ -0.83
SHQ1-203ENST00000463369 BRCA1P38398 1863 aaKnown RBP9.83□□□□□ -0.84
SHQ1-203ENST00000463369 ANKRD65E5RJM6 399 aa9.83□□□□□ -0.84
SHQ1-203ENST00000463369 POTEB2H3BUK9 544 aa9.83□□□□□ -0.84
SHQ1-203ENST00000463369 IKBKBO14920 756 aa9.83□□□□□ -0.84
SHQ1-203ENST00000463369 ME1P48163 572 aa9.83□□□□□ -0.84
SHQ1-203ENST00000463369 NLRP12P59046 1061 aa9.83□□□□□ -0.84
SHQ1-203ENST00000463369 NAA16Q6N069 864 aaPredicted RBP9.83□□□□□ -0.84
SHQ1-203ENST00000463369 TMEM139Q8IV31 216 aa9.83□□□□□ -0.84
SHQ1-203ENST00000463369 ANKZF1Q9H8Y5 726 aa9.83□□□□□ -0.84
SHQ1-203ENST00000463369 ECHDC1Q9NTX5 307 aa9.83□□□□□ -0.84
SHQ1-203ENST00000463369 KLF15Q9UIH9 416 aa9.83□□□□□ -0.84
SHQ1-203ENST00000463369 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.83□□□□□ -0.84
SHQ1-203ENST00000463369 AKAP11Q9UKA4 1901 aa9.83□□□□□ -0.84
SHQ1-203ENST00000463369 SLX4Q8IY92 1834 aa9.83□□□□□ -0.84
SHQ1-203ENST00000463369 HIP1O00291 1037 aa9.83□□□□□ -0.84
SHQ1-203ENST00000463369 SOCS7O14512 581 aa9.83□□□□□ -0.84
SHQ1-203ENST00000463369 CBFA2T2O43439 604 aa9.83□□□□□ -0.84
SHQ1-203ENST00000463369 KIF1CO43896 1103 aaKnown RBP9.83□□□□□ -0.84
SHQ1-203ENST00000463369 PDGFRBP09619 1106 aa9.83□□□□□ -0.84
SHQ1-203ENST00000463369 COPB2P35606 906 aa9.83□□□□□ -0.84
SHQ1-203ENST00000463369 IGHMBP2P38935 993 aaKnown RBP9.83□□□□□ -0.84
SHQ1-203ENST00000463369 DNAJC21Q5F1R6 531 aaKnown RBP9.83□□□□□ -0.84
SHQ1-203ENST00000463369 DDX46Q7L014 1031 aaKnown RBP9.83□□□□□ -0.84
SHQ1-203ENST00000463369 RAVER1Q8IY67 606 aaKnown RBP9.83□□□□□ -0.84
SHQ1-203ENST00000463369 CLASRPQ8N2M8 674 aaKnown RBP9.83□□□□□ -0.84
SHQ1-203ENST00000463369 SMARCC2Q8TAQ2 1214 aa9.83□□□□□ -0.84
SHQ1-203ENST00000463369 FAM71BQ8TC56 605 aa9.83□□□□□ -0.84
SHQ1-203ENST00000463369 MRPS27Q92552 414 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms