RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 STXBP3O00186 592 aa11.63□□□□□ -0.55
MSH5-211ENST00000463144 STRIP1Q5VSL9 837 aa11.63□□□□□ -0.55
MSH5-211ENST00000463144 KIAA0825Q8IV33 1275 aa11.63□□□□□ -0.55
MSH5-211ENST00000463144 ELOA2Q8IYF1 753 aaPredicted RBP11.63□□□□□ -0.55
MSH5-211ENST00000463144 CNKSR1Q969H4 720 aa11.63□□□□□ -0.55
MSH5-211ENST00000463144 EPSTI1Q96J88 318 aa11.63□□□□□ -0.55
MSH5-211ENST00000463144 ZDHHC15Q96MV8 337 aa11.63□□□□□ -0.55
MSH5-211ENST00000463144 SPZ1Q9BXG8 430 aa11.63□□□□□ -0.55
MSH5-211ENST00000463144 NAT10Q9H0A0 1025 aaKnown RBP11.63□□□□□ -0.55
MSH5-211ENST00000463144 MTMR4Q9NYA4 1195 aa11.63□□□□□ -0.55
MSH5-211ENST00000463144 PCDHA4Q9UN74 947 aa11.63□□□□□ -0.55
MSH5-211ENST00000463144 PCDHA5Q9Y5H7 936 aa11.63□□□□□ -0.55
MSH5-211ENST00000463144 USP17L5A8MUK1 530 aa11.63□□□□□ -0.55
MSH5-211ENST00000463144 ACTN4O43707 911 aaKnown RBP11.63□□□□□ -0.55
MSH5-211ENST00000463144 CALML3P27482 149 aa11.63□□□□□ -0.55
MSH5-211ENST00000463144 SHMT1P34896 483 aa11.63□□□□□ -0.55
MSH5-211ENST00000463144 FKBP1AP62942 108 aaKnown RBP11.63□□□□□ -0.55
MSH5-211ENST00000463144 ATP2C1P98194 919 aaPredicted RBP11.63□□□□□ -0.55
MSH5-211ENST00000463144 PTGDRQ13258 359 aa11.63□□□□□ -0.55
MSH5-211ENST00000463144 NCAPHQ15003 741 aa11.63□□□□□ -0.55
MSH5-211ENST00000463144 AOC3Q16853 763 aa11.63□□□□□ -0.55
MSH5-211ENST00000463144 CLEC10AQ8IUN9 316 aa11.63□□□□□ -0.55
MSH5-211ENST00000463144 RASGRP4Q8TDF6 673 aa11.63□□□□□ -0.55
MSH5-211ENST00000463144 LZTS2Q9BRK4 669 aa11.63□□□□□ -0.55
MSH5-211ENST00000463144 BARHL2Q9NY43 387 aa11.63□□□□□ -0.55
MSH5-211ENST00000463144 SERPINB13Q9UIV8 391 aa11.63□□□□□ -0.55
MSH5-211ENST00000463144 SIPA1L1O43166 1804 aa11.62□□□□□ -0.55
MSH5-211ENST00000463144 PARP1P09874 1014 aaKnown RBP11.62□□□□□ -0.55
MSH5-211ENST00000463144 PRR29P0C7W0 189 aa11.62□□□□□ -0.55
MSH5-211ENST00000463144 BMP6P22004 513 aa11.62□□□□□ -0.55
MSH5-211ENST00000463144 TRAPPC10P48553 1259 aa11.62□□□□□ -0.55
MSH5-211ENST00000463144 SF3B2Q13435 895 aaKnown RBP11.62□□□□□ -0.55
MSH5-211ENST00000463144 IL17AQ16552 155 aa11.62□□□□□ -0.55
MSH5-211ENST00000463144 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.62□□□□□ -0.55
MSH5-211ENST00000463144 GRAMD1CQ8IYS0 662 aa11.62□□□□□ -0.55
MSH5-211ENST00000463144 PDILTQ8N807 584 aa11.62□□□□□ -0.55
MSH5-211ENST00000463144 UPF1Q92900 1129 aaKnown RBP eCLIP11.62□□□□□ -0.55
MSH5-211ENST00000463144 MRIQ9BWK5 157 aa11.62□□□□□ -0.55
MSH5-211ENST00000463144 BMP15O95972 392 aa11.62□□□□□ -0.55
MSH5-211ENST00000463144 CACNB3P54284 484 aa11.62□□□□□ -0.55
MSH5-211ENST00000463144 ZRSR1Q15695 479 aaKnown RBP11.62□□□□□ -0.55
MSH5-211ENST00000463144 HEATR3Q7Z4Q2 680 aa11.62□□□□□ -0.55
MSH5-211ENST00000463144 C4orf32Q8N8J7 132 aa11.62□□□□□ -0.55
MSH5-211ENST00000463144 DAGLBQ8NCG7 672 aa11.62□□□□□ -0.55
MSH5-211ENST00000463144 FERMT2Q96AC1 680 aa11.62□□□□□ -0.55
MSH5-211ENST00000463144 PCDHA6Q9UN73 950 aa11.62□□□□□ -0.55
MSH5-211ENST00000463144 PCDHA8Q9Y5H6 950 aa11.62□□□□□ -0.55
MSH5-211ENST00000463144 GREB1LQ9C091 1923 aaPredicted RBP11.61□□□□□ -0.55
MSH5-211ENST00000463144 PDHBP11177 359 aa11.61□□□□□ -0.55
MSH5-211ENST00000463144 PTGS1P23219 599 aa11.61□□□□□ -0.55
MSH5-211ENST00000463144 MCM7P33993 719 aa11.61□□□□□ -0.55
MSH5-211ENST00000463144 SARSP49591 514 aaKnown RBP11.61□□□□□ -0.55
MSH5-211ENST00000463144 EIF6P56537 245 aaKnown RBP11.61□□□□□ -0.55
MSH5-211ENST00000463144 POSTNQ15063 836 aa11.61□□□□□ -0.55
MSH5-211ENST00000463144 CCDC186Q7Z3E2 898 aa11.61□□□□□ -0.55
MSH5-211ENST00000463144 LRRC47Q8N1G4 583 aaKnown RBP11.61□□□□□ -0.55
MSH5-211ENST00000463144 SYMPKQ92797 1274 aaKnown RBP11.61□□□□□ -0.55
MSH5-211ENST00000463144 MRFAP1L1Q96HT8 127 aa11.61□□□□□ -0.55
MSH5-211ENST00000463144 UBA5Q9GZZ9 404 aa11.61□□□□□ -0.55
MSH5-211ENST00000463144 HSD3B7Q9H2F3 369 aa11.61□□□□□ -0.55
MSH5-211ENST00000463144 DNAJC18Q9H819 358 aa11.61□□□□□ -0.55
MSH5-211ENST00000463144 FAM198AQ9UFP1 575 aa11.61□□□□□ -0.55
MSH5-211ENST00000463144 OFD1O75665 1012 aa11.61□□□□□ -0.55
MSH5-211ENST00000463144 SNHG28P0DPA3 235 aa11.61□□□□□ -0.55
MSH5-211ENST00000463144 SMARCA1P28370 1054 aa11.61□□□□□ -0.55
MSH5-211ENST00000463144 CDC25BP30305 580 aa11.61□□□□□ -0.55
MSH5-211ENST00000463144 KIAA2012Q0VF49 1180 aa11.61□□□□□ -0.55
MSH5-211ENST00000463144 CCDC144BQ3MJ40 725 aa11.61□□□□□ -0.55
MSH5-211ENST00000463144 RIOX1Q9H6W3 641 aa11.61□□□□□ -0.55
MSH5-211ENST00000463144 VAT1LQ9HCJ6 419 aa11.61□□□□□ -0.55
MSH5-211ENST00000463144 CLIP2Q9UDT6 1046 aa11.61□□□□□ -0.55
MSH5-211ENST00000463144 SWAP70Q9UH65 585 aa11.61□□□□□ -0.55
MSH5-211ENST00000463144 MYO3BQ8WXR4 1341 aa11.61□□□□□ -0.55
MSH5-211ENST00000463144 VWA3AA6NCI4 1184 aa11.6□□□□□ -0.55
MSH5-211ENST00000463144 DDTLA6NHG4 134 aaPredicted RBP11.6□□□□□ -0.55
MSH5-211ENST00000463144 YDJCA8MPS7 323 aa11.6□□□□□ -0.55
MSH5-211ENST00000463144 GOLGA6L6A8MZA4 724 aa11.6□□□□□ -0.55
MSH5-211ENST00000463144 C21orf2O43822 256 aa11.6□□□□□ -0.55
MSH5-211ENST00000463144 BAG6P46379 1132 aa11.6□□□□□ -0.55
MSH5-211ENST00000463144 HDLBPQ00341 1268 aaKnown RBP11.6□□□□□ -0.55
MSH5-211ENST00000463144 TCP10Q12799 353 aa11.6□□□□□ -0.55
MSH5-211ENST00000463144 NT5DC1Q5TFE4 455 aa11.6□□□□□ -0.55
MSH5-211ENST00000463144 SH3BP5LQ7L8J4 393 aa11.6□□□□□ -0.55
MSH5-211ENST00000463144 DRC7Q8IY82 874 aa11.6□□□□□ -0.55
MSH5-211ENST00000463144 C17orf53Q8N3J3 647 aaPredicted RBP11.6□□□□□ -0.55
MSH5-211ENST00000463144 PIGSQ96S52 555 aa11.6□□□□□ -0.55
MSH5-211ENST00000463144 ZMYND12Q9H0C1 365 aa11.6□□□□□ -0.55
MSH5-211ENST00000463144 MAN1B1Q9UKM7 699 aa11.6□□□□□ -0.55
MSH5-211ENST00000463144 PYCARDQ9ULZ3 195 aa11.6□□□□□ -0.55
MSH5-211ENST00000463144 FRMPD2Q68DX3 1309 aaPredicted RBP11.6□□□□□ -0.55
MSH5-211ENST00000463144 TPM3P06753 285 aa11.6□□□□□ -0.55
MSH5-211ENST00000463144 GALNT17Q6IS24 598 aa11.6□□□□□ -0.55
MSH5-211ENST00000463144 SH3RF1Q7Z6J0 888 aa11.6□□□□□ -0.55
MSH5-211ENST00000463144 DEFB132Q7Z7B7 95 aa11.6□□□□□ -0.55
MSH5-211ENST00000463144 HOMER1Q86YM7 354 aa11.6□□□□□ -0.55
MSH5-211ENST00000463144 CCDC148Q8NFR7 591 aa11.6□□□□□ -0.55
MSH5-211ENST00000463144 DHX58Q96C10 678 aa11.6□□□□□ -0.55
MSH5-211ENST00000463144 IDI2Q9BXS1 227 aa11.6□□□□□ -0.55
MSH5-211ENST00000463144 IKBKBO14920 756 aa11.59□□□□□ -0.55
MSH5-211ENST00000463144 HLA-DOAP06340 250 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms