RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 TLR2O60603 784 aa23.77■■□□□ 1.4
NUP43-205ENST00000463048 SLC1A4P43007 532 aa23.77■■□□□ 1.4
NUP43-205ENST00000463048 CTCFP49711 727 aaPredicted RBP23.77■■□□□ 1.4
NUP43-205ENST00000463048 HERVK_113P62684 666 aa23.77■■□□□ 1.4
NUP43-205ENST00000463048 PNMA1Q8ND90 353 aa23.77■■□□□ 1.4
NUP43-205ENST00000463048 PAGR1Q9BTK6 254 aa23.77■■□□□ 1.4
NUP43-205ENST00000463048 GPCPD1Q9NPB8 672 aa23.77■■□□□ 1.4
NUP43-205ENST00000463048 GPR25O00155 361 aa23.76■■□□□ 1.39
NUP43-205ENST00000463048 EIF5BO60841 1220 aaKnown RBP23.76■■□□□ 1.39
NUP43-205ENST00000463048 BMP3P12645 472 aa23.76■■□□□ 1.39
NUP43-205ENST00000463048 CASTP20810 708 aaKnown RBP23.76■■□□□ 1.39
NUP43-205ENST00000463048 IKQ13123 557 aaPredicted RBP23.76■■□□□ 1.39
NUP43-205ENST00000463048 ANKRD13CQ8N6S4 541 aa23.76■■□□□ 1.39
NUP43-205ENST00000463048 TMEM232C9JQI7 657 aa23.75■■□□□ 1.39
NUP43-205ENST00000463048 BLOC1S2Q6QNY1 142 aa23.75■■□□□ 1.39
NUP43-205ENST00000463048 NFXL1Q6ZNB6 911 aa23.75■■□□□ 1.39
NUP43-205ENST00000463048 IGDCC4Q8TDY8 1250 aa23.75■■□□□ 1.39
NUP43-205ENST00000463048 SYNPO2Q9UMS6 1093 aa23.75■■□□□ 1.39
NUP43-205ENST00000463048 ADGRA2Q96PE1 1338 aa23.75■■□□□ 1.39
NUP43-205ENST00000463048 SH2B2O14492 632 aaPredicted RBP23.74■■□□□ 1.39
NUP43-205ENST00000463048 GOLGA8HP0CJ92 632 aa23.74■■□□□ 1.39
NUP43-205ENST00000463048 COG2Q14746 738 aa23.74■■□□□ 1.39
NUP43-205ENST00000463048 DHX32Q7L7V1 743 aaKnown RBP23.74■■□□□ 1.39
NUP43-205ENST00000463048 RAB11FIP4Q86YS3 637 aa23.74■■□□□ 1.39
NUP43-205ENST00000463048 ZNF296Q8WUU4 475 aaPredicted RBP23.74■■□□□ 1.39
NUP43-205ENST00000463048 ANKS1AQ92625 1134 aa23.74■■□□□ 1.39
NUP43-205ENST00000463048 KIFC2Q96AC6 838 aa23.74■■□□□ 1.39
NUP43-205ENST00000463048 ATG4CQ96DT6 458 aa23.74■■□□□ 1.39
NUP43-205ENST00000463048 LY9Q9HBG7 655 aa23.74■■□□□ 1.39
NUP43-205ENST00000463048 SPDYE16A6NNV3 312 aaPredicted RBP23.73■■□□□ 1.39
NUP43-205ENST00000463048 PDHBP11177 359 aa23.73■■□□□ 1.39
NUP43-205ENST00000463048 PSMA5P28066 241 aa23.73■■□□□ 1.39
NUP43-205ENST00000463048 FGD1P98174 961 aa23.73■■□□□ 1.39
NUP43-205ENST00000463048 TTBK2Q6IQ55 1244 aa23.73■■□□□ 1.39
NUP43-205ENST00000463048 C17orf99Q6UX52 265 aa23.73■■□□□ 1.39
NUP43-205ENST00000463048 DCAF4Q8WV16 495 aa23.73■■□□□ 1.39
NUP43-205ENST00000463048 GMCL1Q96IK5 515 aa23.73■■□□□ 1.39
NUP43-205ENST00000463048 TMEM87BQ96K49 555 aa23.73■■□□□ 1.39
NUP43-205ENST00000463048 MYL10Q9BUA6 226 aa23.73■■□□□ 1.39
NUP43-205ENST00000463048 CFHR5Q9BXR6 569 aa23.73■■□□□ 1.39
NUP43-205ENST00000463048 UPF3BQ9BZI7 483 aaKnown RBP23.73■■□□□ 1.39
NUP43-205ENST00000463048 FKTNO75072 461 aa23.72■■□□□ 1.39
NUP43-205ENST00000463048 DSG3P32926 999 aa23.72■■□□□ 1.39
NUP43-205ENST00000463048 SLC16A2P36021 539 aa23.72■■□□□ 1.39
NUP43-205ENST00000463048 EXOSC10Q01780 885 aaKnown RBP23.72■■□□□ 1.39
NUP43-205ENST00000463048 POTEEQ6S8J3 1075 aa23.72■■□□□ 1.39
NUP43-205ENST00000463048 SLF1Q9BQI6 1058 aa23.72■■□□□ 1.39
NUP43-205ENST00000463048 TXNRD2Q9NNW7 524 aa23.72■■□□□ 1.39
NUP43-205ENST00000463048 CCDC69A6NI79 296 aa23.71■■□□□ 1.39
NUP43-205ENST00000463048 HMGB1P09429 215 aaKnown RBP23.71■■□□□ 1.39
NUP43-205ENST00000463048 RPS6KB1P23443 525 aa23.71■■□□□ 1.39
NUP43-205ENST00000463048 SNAP25P60880 206 aa23.71■■□□□ 1.39
NUP43-205ENST00000463048 SP3Q02447 781 aa23.71■■□□□ 1.39
NUP43-205ENST00000463048 CD99L2Q8TCZ2 262 aa23.71■■□□□ 1.39
NUP43-205ENST00000463048 NUP133Q8WUM0 1156 aa23.71■■□□□ 1.39
NUP43-205ENST00000463048 CPVLQ9H3G5 476 aa23.71■■□□□ 1.39
NUP43-205ENST00000463048 HOXC10Q9NYD6 342 aa23.71■■□□□ 1.39
NUP43-205ENST00000463048 RBPJLQ9UBG7 517 aa23.71■■□□□ 1.39
NUP43-205ENST00000463048 NAP1L2Q9ULW6 460 aaPredicted RBP23.71■■□□□ 1.39
NUP43-205ENST00000463048 BCRP11274 1271 aa23.7■■□□□ 1.38
NUP43-205ENST00000463048 GCLCP48506 637 aaPredicted RBP23.7■■□□□ 1.38
NUP43-205ENST00000463048 SLC4A3P48751 1232 aa23.7■■□□□ 1.38
NUP43-205ENST00000463048 PLS1Q14651 629 aa23.7■■□□□ 1.38
NUP43-205ENST00000463048 Q6ZUG5 572 aa23.7■■□□□ 1.38
NUP43-205ENST00000463048 CATIPQ7Z7H3 387 aa23.7■■□□□ 1.38
NUP43-205ENST00000463048 BTBD7Q9P203 1132 aa23.7■■□□□ 1.38
NUP43-205ENST00000463048 FEM1BQ9UK73 627 aa23.7■■□□□ 1.38
NUP43-205ENST00000463048 PPP1R9AQ9ULJ8 1098 aa23.7■■□□□ 1.38
NUP43-205ENST00000463048 CASP8AP2Q9UKL3 1982 aa23.7■■□□□ 1.38
NUP43-205ENST00000463048 RLFQ13129 1914 aa23.7■■□□□ 1.38
NUP43-205ENST00000463048 PARP14Q460N5 1801 aa23.7■■□□□ 1.38
NUP43-205ENST00000463048 ZSWIM8A7E2V4 1837 aa23.69■■□□□ 1.38
NUP43-205ENST00000463048 RXRAP19793 462 aa23.69■■□□□ 1.38
NUP43-205ENST00000463048 STAT2P52630 851 aa23.69■■□□□ 1.38
NUP43-205ENST00000463048 ZNF543Q08ER8 600 aa23.69■■□□□ 1.38
NUP43-205ENST00000463048 CCDC144CPQ8IYA2 1237 aa23.69■■□□□ 1.38
NUP43-205ENST00000463048 ZNF654Q8IZM8 581 aa23.69■■□□□ 1.38
NUP43-205ENST00000463048 ARHGAP39Q9C0H5 1083 aa23.69■■□□□ 1.38
NUP43-205ENST00000463048 CYP46A1Q9Y6A2 500 aa23.69■■□□□ 1.38
NUP43-205ENST00000463048 CNMDO75829 334 aa23.68■■□□□ 1.38
NUP43-205ENST00000463048 PARP1P09874 1014 aaKnown RBP23.68■■□□□ 1.38
NUP43-205ENST00000463048 Q3C1V9 767 aa23.68■■□□□ 1.38
NUP43-205ENST00000463048 RUFY3Q7L099 469 aa23.68■■□□□ 1.38
NUP43-205ENST00000463048 C22orf23Q9BZE7 217 aa23.68■■□□□ 1.38
NUP43-205ENST00000463048 UBA5Q9GZZ9 404 aa23.68■■□□□ 1.38
NUP43-205ENST00000463048 ZSWIM6Q9HCJ5 1215 aa23.68■■□□□ 1.38
NUP43-205ENST00000463048 CTDP1Q9Y5B0 961 aaPredicted RBP23.68■■□□□ 1.38
NUP43-205ENST00000463048 STAG2Q8N3U4 1231 aa23.67■■□□□ 1.38
NUP43-205ENST00000463048 PRPF38AQ8NAV1 312 aaKnown RBP23.67■■□□□ 1.38
NUP43-205ENST00000463048 GPRC5AQ8NFJ5 357 aa23.67■■□□□ 1.38
NUP43-205ENST00000463048 CHURC1Q8WUH1 139 aa23.67■■□□□ 1.38
NUP43-205ENST00000463048 LARP6Q9BRS8 491 aaKnown RBP23.67■■□□□ 1.38
NUP43-205ENST00000463048 UPF2Q9HAU5 1272 aaKnown RBP23.67■■□□□ 1.38
NUP43-205ENST00000463048 COL11A1P12107 1806 aaPredicted RBP23.67■■□□□ 1.38
NUP43-205ENST00000463048 WDR19Q8NEZ3 1342 aa23.66■■□□□ 1.38
NUP43-205ENST00000463048 VWA5AO00534 786 aa23.66■■□□□ 1.38
NUP43-205ENST00000463048 SNHG28P0DPA3 235 aa23.66■■□□□ 1.38
NUP43-205ENST00000463048 LIFRP42702 1097 aa23.66■■□□□ 1.38
NUP43-205ENST00000463048 ANAPC15P60006 121 aa23.66■■□□□ 1.38
NUP43-205ENST00000463048 ERVK-9P63128 1117 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms