RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 PALM3A6NDB9 673 aaPredicted RBP15.7■□□□□ 0.1
PBRM1-219ENST00000462207 IRF6O14896 467 aa15.7■□□□□ 0.1
PBRM1-219ENST00000462207 PARP1P09874 1014 aaKnown RBP15.7■□□□□ 0.1
PBRM1-219ENST00000462207 HMGCS2P54868 508 aa15.7■□□□□ 0.1
PBRM1-219ENST00000462207 BACE1P56817 501 aa15.7■□□□□ 0.1
PBRM1-219ENST00000462207 HUNKP57058 714 aa15.7■□□□□ 0.1
PBRM1-219ENST00000462207 NTRK3Q16288 839 aa15.7■□□□□ 0.1
PBRM1-219ENST00000462207 TTBK2Q6IQ55 1244 aa15.7■□□□□ 0.1
PBRM1-219ENST00000462207 SYNPO2Q9UMS6 1093 aa15.7■□□□□ 0.1
PBRM1-219ENST00000462207 PTPDC1A2A3K4 754 aa15.7■□□□□ 0.1
PBRM1-219ENST00000462207 CPLX1O14810 134 aa15.7■□□□□ 0.1
PBRM1-219ENST00000462207 HSP90AA1P07900 732 aaKnown RBP15.7■□□□□ 0.1
PBRM1-219ENST00000462207 SLC1A4P43007 532 aa15.7■□□□□ 0.1
PBRM1-219ENST00000462207 FAM83BQ5T0W9 1011 aa15.7■□□□□ 0.1
PBRM1-219ENST00000462207 SRBD1Q8N5C6 995 aaKnown RBP15.7■□□□□ 0.1
PBRM1-219ENST00000462207 DCAF4Q8WV16 495 aa15.7■□□□□ 0.1
PBRM1-219ENST00000462207 PHKBQ93100 1093 aa15.7■□□□□ 0.1
PBRM1-219ENST00000462207 SLC10A4Q96EP9 437 aa15.7■□□□□ 0.1
PBRM1-219ENST00000462207 GMCL1Q96IK5 515 aa15.7■□□□□ 0.1
PBRM1-219ENST00000462207 MAP3K14Q99558 947 aa15.7■□□□□ 0.1
PBRM1-219ENST00000462207 PTPRFP10586 1907 aa15.7■□□□□ 0.1
PBRM1-219ENST00000462207 CNTNAP5Q8WYK1 1306 aa15.69■□□□□ 0.1
PBRM1-219ENST00000462207 KIF5BP33176 963 aa15.69■□□□□ 0.1
PBRM1-219ENST00000462207 PPATQ06203 517 aa15.69■□□□□ 0.1
PBRM1-219ENST00000462207 FUT2Q10981 343 aa15.69■□□□□ 0.1
PBRM1-219ENST00000462207 MKRN3Q13064 507 aaKnown RBP15.69■□□□□ 0.1
PBRM1-219ENST00000462207 DDX11Q96FC9 970 aa15.69■□□□□ 0.1
PBRM1-219ENST00000462207 UBA5Q9GZZ9 404 aa15.69■□□□□ 0.1
PBRM1-219ENST00000462207 RBM28Q9NW13 759 aaKnown RBP15.69■□□□□ 0.1
PBRM1-219ENST00000462207 hCG_1642624A0A1W2PR95 340 aa15.68■□□□□ 0.1
PBRM1-219ENST00000462207 KLRF2D3W0D1 207 aa15.68■□□□□ 0.1
PBRM1-219ENST00000462207 BMP3P12645 472 aa15.68■□□□□ 0.1
PBRM1-219ENST00000462207 VCAM1P19320 739 aa15.68■□□□□ 0.1
PBRM1-219ENST00000462207 SLC16A2P36021 539 aa15.68■□□□□ 0.1
PBRM1-219ENST00000462207 FSTL1Q12841 308 aa15.68■□□□□ 0.1
PBRM1-219ENST00000462207 PPIL2Q13356 520 aa15.68■□□□□ 0.1
PBRM1-219ENST00000462207 ASPRV1Q53RT3 343 aa15.68■□□□□ 0.1
PBRM1-219ENST00000462207 SAPCD2Q86UD0 394 aa15.68■□□□□ 0.1
PBRM1-219ENST00000462207 PIBF1Q8WXW3 757 aa15.68■□□□□ 0.1
PBRM1-219ENST00000462207 WNK4Q96J92 1243 aa15.68■□□□□ 0.1
PBRM1-219ENST00000462207 CCDC196A0A1B0GTZ2 297 aa15.68■□□□□ 0.1
PBRM1-219ENST00000462207 CYTH3O43739 400 aa15.68■□□□□ 0.1
PBRM1-219ENST00000462207 DAXXQ9UER7 740 aaPredicted RBP15.68■□□□□ 0.1
PBRM1-219ENST00000462207 LOC285556D6RIA3 1793 aa15.67■□□□□ 0.1
PBRM1-219ENST00000462207 UNCXA6NJT0 531 aa15.67■□□□□ 0.1
PBRM1-219ENST00000462207 DHX16O60231 1041 aaKnown RBP15.67■□□□□ 0.1
PBRM1-219ENST00000462207 IFNAR1P17181 557 aa15.67■□□□□ 0.1
PBRM1-219ENST00000462207 USP14P54578 494 aa15.67■□□□□ 0.1
PBRM1-219ENST00000462207 SMARCC2Q8TAQ2 1214 aa15.67■□□□□ 0.1
PBRM1-219ENST00000462207 INTS4Q96HW7 963 aaKnown RBP15.67■□□□□ 0.1
PBRM1-219ENST00000462207 SLC26A6Q9BXS9 759 aa15.67■□□□□ 0.1
PBRM1-219ENST00000462207 FBXO28Q9NVF7 368 aa15.67■□□□□ 0.1
PBRM1-219ENST00000462207 KCNH4Q9UQ05 1017 aa15.67■□□□□ 0.1
PBRM1-219ENST00000462207 C19orf81C9J6K1 198 aa15.66■□□□□ 0.1
PBRM1-219ENST00000462207 FDPSP14324 419 aaKnown RBP15.66■□□□□ 0.1
PBRM1-219ENST00000462207 SH3D19Q5HYK7 790 aa15.66■□□□□ 0.1
PBRM1-219ENST00000462207 LPAR1Q92633 364 aa15.66■□□□□ 0.1
PBRM1-219ENST00000462207 C12orf42Q96LP6 360 aa15.66■□□□□ 0.1
PBRM1-219ENST00000462207 ABT1Q9ULW3 272 aaKnown RBP15.66■□□□□ 0.1
PBRM1-219ENST00000462207 SMC3Q9UQE7 1217 aa15.66■□□□□ 0.1
PBRM1-219ENST00000462207 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.66■□□□□ 0.1
PBRM1-219ENST00000462207 TLL2Q9Y6L7 1015 aa15.66■□□□□ 0.1
PBRM1-219ENST00000462207 A0A0G2JLL6 359 aaPredicted RBP15.66■□□□□ 0.1
PBRM1-219ENST00000462207 TMEM88BA6NKF7 163 aa15.66■□□□□ 0.1
PBRM1-219ENST00000462207 TMEM232C9JQI7 657 aa15.66■□□□□ 0.1
PBRM1-219ENST00000462207 WDR46O15213 610 aaKnown RBP15.66■□□□□ 0.1
PBRM1-219ENST00000462207 GJB2P29033 226 aa15.66■□□□□ 0.1
PBRM1-219ENST00000462207 PPP2R5BQ15173 497 aa15.66■□□□□ 0.1
PBRM1-219ENST00000462207 GPATCH4Q5T3I0 446 aaKnown RBP15.66■□□□□ 0.1
PBRM1-219ENST00000462207 CPLX2Q6PUV4 134 aaKnown RBP15.66■□□□□ 0.1
PBRM1-219ENST00000462207 SAMD1Q6SPF0 538 aaPredicted RBP15.66■□□□□ 0.1
PBRM1-219ENST00000462207 PRRT2Q7Z6L0 340 aaPredicted RBP15.66■□□□□ 0.1
PBRM1-219ENST00000462207 RASAL3Q86YV0 1011 aa15.66■□□□□ 0.1
PBRM1-219ENST00000462207 LLPHQ9BRT6 129 aaKnown RBP15.66■□□□□ 0.1
PBRM1-219ENST00000462207 RPAP3Q9H6T3 665 aaPredicted RBP15.66■□□□□ 0.1
PBRM1-219ENST00000462207 TMOD4Q9NZQ9 345 aa15.66■□□□□ 0.1
PBRM1-219ENST00000462207 CXCL11O14625 94 aa15.65■□□□□ 0.1
PBRM1-219ENST00000462207 FMNL1O95466 1100 aaPredicted RBP15.65■□□□□ 0.1
PBRM1-219ENST00000462207 GNAQP50148 359 aa15.65■□□□□ 0.1
PBRM1-219ENST00000462207 FOSBP53539 338 aa15.65■□□□□ 0.1
PBRM1-219ENST00000462207 IKQ13123 557 aaPredicted RBP15.65■□□□□ 0.1
PBRM1-219ENST00000462207 TREML2Q5T2D2 321 aa15.65■□□□□ 0.1
PBRM1-219ENST00000462207 SPRYD7Q5W111 196 aa15.65■□□□□ 0.1
PBRM1-219ENST00000462207 GADL1Q6ZQY3 521 aa15.65■□□□□ 0.1
PBRM1-219ENST00000462207 AIFM3Q96NN9 605 aa15.65■□□□□ 0.1
PBRM1-219ENST00000462207 TANGO6Q9C0B7 1094 aa15.65■□□□□ 0.1
PBRM1-219ENST00000462207 VAT1LQ9HCJ6 419 aa15.65■□□□□ 0.1
PBRM1-219ENST00000462207 ORC3Q9UBD5 711 aaPredicted RBP15.65■□□□□ 0.1
PBRM1-219ENST00000462207 CDKL5O76039 1030 aa15.64■□□□□ 0.09
PBRM1-219ENST00000462207 ZNF157P51786 506 aaPredicted RBP15.64■□□□□ 0.09
PBRM1-219ENST00000462207 SNAP25P60880 206 aa15.64■□□□□ 0.09
PBRM1-219ENST00000462207 SSRP1Q08945 709 aaKnown RBP15.64■□□□□ 0.09
PBRM1-219ENST00000462207 MOGSQ13724 837 aa15.64■□□□□ 0.09
PBRM1-219ENST00000462207 RGMBQ6NW40 437 aa15.64■□□□□ 0.09
PBRM1-219ENST00000462207 HOMER1Q86YM7 354 aa15.64■□□□□ 0.09
PBRM1-219ENST00000462207 SPZ1Q9BXG8 430 aa15.64■□□□□ 0.09
PBRM1-219ENST00000462207 V9GY48 417 aaPredicted RBP15.64■□□□□ 0.09
PBRM1-219ENST00000462207 ADGRF4Q8IZF3 695 aa15.64■□□□□ 0.09
PBRM1-219ENST00000462207 LZTS2Q9BRK4 669 aa15.64■□□□□ 0.09
PBRM1-219ENST00000462207 BAZ2BQ9UIF8 2168 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms