RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 TFF2Q03403 129 aa7.32□□□□□ -1.24
SMARCC1-204ENST00000462198 ADGRE1Q14246 886 aa7.32□□□□□ -1.24
SMARCC1-204ENST00000462198 PKDCCQ504Y2 493 aa7.32□□□□□ -1.24
SMARCC1-204ENST00000462198 TREML2Q5T2D2 321 aa7.32□□□□□ -1.24
SMARCC1-204ENST00000462198 SH3RF1Q7Z6J0 888 aa7.32□□□□□ -1.24
SMARCC1-204ENST00000462198 ZNF516Q92618 1163 aa7.32□□□□□ -1.24
SMARCC1-204ENST00000462198 TRIM43Q96BQ3 446 aaPredicted RBP7.32□□□□□ -1.24
SMARCC1-204ENST00000462198 FAM84BQ96KN1 310 aaPredicted RBP7.32□□□□□ -1.24
SMARCC1-204ENST00000462198 NUDT12Q9BQG2 462 aa7.32□□□□□ -1.24
SMARCC1-204ENST00000462198 C11orf16Q9NQ32 467 aa7.32□□□□□ -1.24
SMARCC1-204ENST00000462198 CXXC1Q9P0U4 656 aaPredicted RBP7.32□□□□□ -1.24
SMARCC1-204ENST00000462198 PNMA3Q9UL41 463 aa7.32□□□□□ -1.24
SMARCC1-204ENST00000462198 AGTPBP1Q9UPW5 1226 aa7.32□□□□□ -1.24
SMARCC1-204ENST00000462198 TNNQ9UQP3 1299 aa7.32□□□□□ -1.24
SMARCC1-204ENST00000462198 IVNS1ABPQ9Y6Y0 642 aa7.32□□□□□ -1.24
SMARCC1-204ENST00000462198 MAST2Q6P0Q8 1798 aa7.32□□□□□ -1.24
SMARCC1-204ENST00000462198 PTPRFP10586 1907 aa7.32□□□□□ -1.24
SMARCC1-204ENST00000462198 RLFQ13129 1914 aa7.31□□□□□ -1.24
SMARCC1-204ENST00000462198 CARNS1A5YM72 827 aa7.31□□□□□ -1.24
SMARCC1-204ENST00000462198 PALM3A6NDB9 673 aaPredicted RBP7.31□□□□□ -1.24
SMARCC1-204ENST00000462198 TRIM75PA6NK02 468 aa7.31□□□□□ -1.24
SMARCC1-204ENST00000462198 PHF20L1A8MW92 1017 aa7.31□□□□□ -1.24
SMARCC1-204ENST00000462198 ATG7O95352 703 aa7.31□□□□□ -1.24
SMARCC1-204ENST00000462198 NBPF7P0C2Y1 421 aaPredicted RBP7.31□□□□□ -1.24
SMARCC1-204ENST00000462198 UBTFL1P0CB47 393 aaPredicted RBP7.31□□□□□ -1.24
SMARCC1-204ENST00000462198 ZKSCAN1P17029 563 aaPredicted RBP7.31□□□□□ -1.24
SMARCC1-204ENST00000462198 KCNQ1P51787 676 aa7.31□□□□□ -1.24
SMARCC1-204ENST00000462198 CCL14Q16627 93 aa7.31□□□□□ -1.24
SMARCC1-204ENST00000462198 AAK1Q2M2I8 961 aa7.31□□□□□ -1.24
SMARCC1-204ENST00000462198 ITPRIPQ8IWB1 547 aa7.31□□□□□ -1.24
SMARCC1-204ENST00000462198 SCYL3Q8IZE3 742 aa7.31□□□□□ -1.24
SMARCC1-204ENST00000462198 TMEM57Q8N5G2 664 aa7.31□□□□□ -1.24
SMARCC1-204ENST00000462198 PANK1Q8TE04 598 aa7.31□□□□□ -1.24
SMARCC1-204ENST00000462198 IPO9Q96P70 1041 aaKnown RBP7.31□□□□□ -1.24
SMARCC1-204ENST00000462198 UCN2Q96RP3 112 aa7.31□□□□□ -1.24
SMARCC1-204ENST00000462198 PLA2G12BQ9BX93 195 aa7.31□□□□□ -1.24
SMARCC1-204ENST00000462198 TMEM134Q9H6X4 195 aa7.31□□□□□ -1.24
SMARCC1-204ENST00000462198 STK17AQ9UEE5 414 aa7.31□□□□□ -1.24
SMARCC1-204ENST00000462198 HDAC5Q9UQL6 1122 aa7.31□□□□□ -1.24
SMARCC1-204ENST00000462198 RPAP1Q9BWH6 1393 aaPredicted RBP7.31□□□□□ -1.24
SMARCC1-204ENST00000462198 DDX11L8A8MPP1 907 aa7.3□□□□□ -1.24
SMARCC1-204ENST00000462198 DNM1LO00429 736 aa7.3□□□□□ -1.24
SMARCC1-204ENST00000462198 RLBP1P12271 317 aa7.3□□□□□ -1.24
SMARCC1-204ENST00000462198 ITGB8P26012 769 aa7.3□□□□□ -1.24
SMARCC1-204ENST00000462198 CNGA1P29973 690 aa7.3□□□□□ -1.24
SMARCC1-204ENST00000462198 GGCXP38435 758 aa7.3□□□□□ -1.24
SMARCC1-204ENST00000462198 NHLH1Q02575 133 aa7.3□□□□□ -1.24
SMARCC1-204ENST00000462198 CHAF1AQ13111 956 aaPredicted RBP7.3□□□□□ -1.24
SMARCC1-204ENST00000462198 GJC2Q5T442 439 aaPredicted RBP7.3□□□□□ -1.24
SMARCC1-204ENST00000462198 HHIPL2Q6UWX4 724 aa7.3□□□□□ -1.24
SMARCC1-204ENST00000462198 LPAR1Q92633 364 aa7.3□□□□□ -1.24
SMARCC1-204ENST00000462198 USP44Q9H0E7 712 aa7.3□□□□□ -1.24
SMARCC1-204ENST00000462198 PDLIM7Q9NR12 457 aa7.3□□□□□ -1.24
SMARCC1-204ENST00000462198 IQSEC3Q9UPP2 1182 aaPredicted RBP7.3□□□□□ -1.24
SMARCC1-204ENST00000462198 CHMP3Q9Y3E7 222 aa7.3□□□□□ -1.24
SMARCC1-204ENST00000462198 REV3LO60673 3130 aa7.3□□□□□ -1.24
SMARCC1-204ENST00000462198 CHD9Q3L8U1 2897 aa7.3□□□□□ -1.24
SMARCC1-204ENST00000462198 UTYO14607 1347 aa7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 FRMPD3Q5JV73 1810 aa7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 PHIPQ8WWQ0 1821 aa7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 A0A1B0GUL6 1792 aa7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 GRXCR1A8MXD5 290 aa7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 PI4K2BG5E9Z4 385 aa7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 CTNND1O60716 968 aaKnown RBP7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 FRAT2O75474 233 aaPredicted RBP7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 GNAI3P08754 354 aa7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 CASP7P55210 303 aa7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 RRP1P56182 461 aaKnown RBP7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 PRR20EP86478 221 aa7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 PRR20CP86479 221 aa7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 PRR20DP86480 221 aa7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 PRR20BP86481 221 aa7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 PRR20AP86496 221 aa7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 IFIT5Q13325 482 aaKnown RBP7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 UBE4AQ14139 1066 aa7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 TRIM60Q495X7 471 aa7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 LDHAL6AQ6ZMR3 332 aa7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 CCDC129Q6ZRS4 1044 aa7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 CCDC84Q86UT8 332 aaPredicted RBP7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 PACS2Q86VP3 889 aa7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 ZFPM1Q8IX07 1006 aa7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 ARRDC4Q8NCT1 418 aa7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 TBC1D22AQ8WUA7 517 aa7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 SOCS4Q8WXH5 440 aa7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 USP6NLQ92738 828 aa7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 MEIS3Q99687 375 aa7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 ASCC2Q9H1I8 757 aaPredicted RBP7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 VRTNQ9H8Y1 702 aa7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 MORF4L1Q9UBU8 362 aa7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 DDX20Q9UHI6 824 aaKnown RBP7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 GNEQ9Y223 722 aaKnown RBP7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 LRRFIP2Q9Y608 721 aaKnown RBP7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 TACC3Q9Y6A5 838 aa7.29□□□□□ -1.24
SMARCC1-204ENST00000462198 C3orf80F5H4A9 247 aa7.28□□□□□ -1.24
SMARCC1-204ENST00000462198 HOXA2O43364 376 aa7.28□□□□□ -1.24
SMARCC1-204ENST00000462198 TLL1O43897 1013 aa7.28□□□□□ -1.24
SMARCC1-204ENST00000462198 MSCO60682 206 aa7.28□□□□□ -1.24
SMARCC1-204ENST00000462198 PEX10O60683 326 aa7.28□□□□□ -1.24
SMARCC1-204ENST00000462198 KDM4AO75164 1064 aa7.28□□□□□ -1.24
SMARCC1-204ENST00000462198 RAG1P15918 1043 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms